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http://dx.doi.org/10.7847/jfp.2022.35.1.129

The complete genome sequence of a white spot syndrome virus isolated from Litopenaeus vannamei  

Lee, A-reum (School of Marine and Fisheries Life Science, Pukyong National University)
Kong, Kyoung-Hui (Department of Aqualife Medicine, Chonnam National University)
Kim, Hwi-Jin (Department of Aqualife Medicine, Chonnam National University)
Oh, Myung-Joo (Department of Aqualife Medicine, Chonnam National University)
Kim, Do-Hyung (Department of Aquatic life Medicine, Pukyong National University)
Kim, Jong-Oh (School of Marine and Fisheries Life Science, Pukyong National University)
Kim, Wi-Sik (Department of Aqualife Medicine, Chonnam National University)
Publication Information
Journal of fish pathology / v.35, no.1, 2022 , pp. 129-133 More about this Journal
Abstract
The full genome sequence of a Korean white spot syndrome virus (WSSV, isolate: WSSV-GoC18) is presented here. We obtained a total of 12,320,554 reads with 291,172 bases, 170 gene, and 170 coding DNA sequence, which were assembled in 1 contig. Phylogenetic analysis revealed that the WSSV-GoC18 was closely related to Chinese isolate (WSSV-PC) and distinctly different with previously reported a Korean isolate (WSSV K-LV1). The complete genome sequence of WSSV isolates will be of great help in molecular epidemiological studies, contributing to molecular diagnosis and disease prevention in shrimp aquaculture.
Keywords
white spot syndrome virus; WSSV; complete genome sequence;
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