• Title/Summary/Keyword: 종 포함관계

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Genetic relationship of Aloe vera 'Saengjang', a new forma, based on cpDNA and ITS sequence variation (cpDNA와 ITS 염기변이에 근거한 신품종 생장알로에 유전적 상관관계)

  • Srikanth, Krishnamoorthy;Jang, Seon Il;Whang, Sung Soo
    • Korean Journal of Plant Taxonomy
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    • v.44 no.4
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    • pp.250-256
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    • 2014
  • This study was carried out to understand the genetic relationship of three Aloe spp. cultivated in Korea, A. saponaria, A. vera and A. arborescens and a new variant in Korea based on three plastid (matK, trnL-F, rbcL) and one nuclear (ITS regions) DNA barcode markers. A total of 2,420 bp sequence was amplified. Two indels were detected in the trnL region, and also several species specific nucleotide loci were detected in all 29 parsimonious informative sites, and 148 variable sites were detected among four taxa studied while 170 variable and 75 parsimonious sites were detected when other Aloe spp. in worldwide were used. An UPGMA phenogram with 10,000 bootstrap replication showed that the new variant was closest to A. vera. The variant was not morphologically and genetically concurrent with any reported species so far. The clustering of Aloe species were broadly in agreement with previously reported results.

Heterogeneous Lifelog Mining Model in Health Big-data Platform (헬스 빅데이터 플랫폼에서 이기종 라이프로그 마이닝 모델)

  • Kang, JI-Soo;Chung, Kyungyong
    • Journal of the Korea Convergence Society
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    • v.9 no.10
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    • pp.75-80
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    • 2018
  • In this paper, we propose heterogeneous lifelog mining model in health big-data platform. It is an ontology-based mining model for collecting user's lifelog in real-time and providing healthcare services. The proposed method distributes heterogeneous lifelog data and processes it in real time in a cloud computing environment. The knowledge base is reconstructed by an upper ontology method suitable for the environment constructed based on the heterogeneous ontology. The restructured knowledge base generates inference rules using Jena 4.0 inference engines, and provides real-time healthcare services by rule-based inference methods. Lifelog mining constructs an analysis of hidden relationships and a predictive model for time-series bio-signal. This enables real-time healthcare services that realize preventive health services to detect changes in the users' bio-signal by exploring negative or positive correlations that are not included in the relationships or inference rules. The performance evaluation shows that the proposed heterogeneous lifelog mining model method is superior to other models with an accuracy of 0.734, a precision of 0.752.

Taxonomic report on un-introduced, goverment designated environmentally harmful species (plants) in the Korean Peninsula (I) (한반도 미유입 환경위해우려종(식물)에 대한 분류학적 특성 보고 (1))

  • Yoon, Chang-Young;Park, Kwang-Woo;Jung, Joonhyung;Hyun, Jongyoung;Kim, Joo-Hwan
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.65-65
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    • 2018
  • 외래종이라 함은 도입종, 귀화종, 침입종을 통칭하는 용어로 특정한 인위적 목적 여부에 관계없이, 본래의 자생지가 아닌 외부에서 들어와 다른 생물의 서식지를 점유하여 번식하는 생물종을 지칭하는 것으로, 침입외래종은 생태계에 도입되고 확산되면서 생물다양성과 연계된 생태계서비스를 위협하거나 또는 악영향을 미치는 외래종을 의미하며, 위해우려종이란 국내에 유입될 경우 생태계 등에 위해를 미칠 우려가 있어 환경부장관이 지정 고시하는 생물종 (살아있는 것으로서 개체의 일부 알 종자 등을 포함)을 지칭한다. 본 연구는 환경부고시에 따른 한반도 미유입 환경위해우려종43종에 대하여 농업환경위해성 평가를 실시하고, 분류동정 기법을 개발하는 등 기초 자료를 제공하고자 수행되었다. 이를 위해, 해외식물표본 확인과 미국 현장조사를 실시하였으며, 우선적으로 8종의 미유입 식물에 대하여 보고하고자 한다. - Carduus acanthoides L. (Asteraceae), Carduus tenuiflorus W. Curtis (Asteraceae), Onopordum acanthium L. (Asteraceae), Chromolaena odorata (L.) R.M. King & H. Rob. (Asteraceae), Hydrocotyle ranunculoides L.f. (Apiaceae), Oenanthe pimpinelloides L. (Apiaceae), Ehrharta erecta Lam. (Poaceae), Paspalum conjugatum P.J. Bergius (Poaceae).

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A Palynotaxonomic Study of Euphorbia Section Zygophyllidium (Euphorbiaceae) (대극과 대극속 Zigophyllidium절의 화분분류학적 연구)

  • Lee, Eun-Deok;Park, Ki-Ryong
    • Applied Microscopy
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    • v.36 no.3
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    • pp.195-208
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    • 2006
  • Using light and scanning electron microscopy morphological studies of pollens were conducted to determine the sectional boundary and the relationships among eight species of section Zygophyllidium and its five related species of subg. Poinsettia. Pollen characters of 13 species were described, and their diagnostic keys were presented here. Based on the sculpturing patterns and the results of numerical analysis using 10 pollen characters 13 species were divided into four Pollen types: type I, having micro-reticulate shaped pollen (E. hexagona, E. lagunensis, E. hexagonoides and E. bilobata), type II, having reticulate shaped pollen (E. delicatula, E. extipulata, E. dentata, E. heterophylla, E. pulcherrima and E. cyathophora), type III, micro-reticulate shaped pollen with platten muri (E. lacera), and type IV, haying foveolate shaped pollen grains (E. chersonesa and E. eriantha). The results of pollen morphological studies suggest that the sect. Zygophyllidium should be delimited based on only four species, E. hexagona, E. lagunensis, E. hexagonoides and E. bilobata, E. delicatural and E. exstipulata of sect. Zygophyllidium must be transferred to subg. Poinsettia based on pollen morphology. E. eriantha and E. chersonesa having forveolate sculpturing pattern of pollen grains seem to be closely related with species from subg. Agaloma, and additional studies of these species are needed to determine the species relationships within Agaloma group.

Objective in Vivo Quantification of Emphysema by Thin-Section CT: Correlation with Physiologic Findings (고해상 전산화단층촬영을 이용한 폐기종의 정량적 분석: 폐기능 검사와의 비교)

  • Lee, Jee-Young;Lee, Kye-Young;Choi, Eun-Kyoung;Kim, Sang-Joon;Choi, Young-Hi
    • Tuberculosis and Respiratory Diseases
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    • v.45 no.5
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    • pp.992-999
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    • 1998
  • Background: To correlate the emphysema score for quantification of the overall extent of emphysema in both lungs by CT with physiologic fingings and to get more objective and simple method to assess the extent of emphysema. Method: Thin-section CT and pulmonary function test(PFT) were performed in 17 patients with emphysema (all males, mean age, 62 years). Emphysema score was obtained as percentage of emphysematous lung area, dividing the total area of the emphysema(voxels with attenuation value less than -880, -900, -920HU, respectively) by the overall area of both lungs(voxels with attenuation value less than -400HU) with highlighting voxels using "Density mask" program. Emphysema score was calculated from whole lung(ESV) and 5 representative scans(ESR) using "Density mask", Visual emphysema score(ESV) was obtained by visual assessment from 5 representative scans. Correlation of these emphysema scores(ESW, ESR, ESV) and physiologic findings were performed, comparing the ESW with ESR and ESV. Results: ESW had correlation with DLCO(r=0.53-0.64) and $FEV_1/FVC$(r=0.42-0.57) among PFT parameters. ESR had good correlation with ESW and with PFT parameters as well. ESV did not correlate with PFT parameters except DLCO. Conclusion: CT quantification of emphysema using "density mask" correlated well with physiologic findings. To assess the severity of emphysema, both ESW and ESR are more reliable than ESV, and ESR is recommended in routine practice as it is objective, simple and reliable.

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Phylogeny of Desmodesmus (Scenedesmaceae, Chlorophyceae) in Korea based on multigene data analysis (다유전자 분석을 통한 한국산 녹조류 Desmodesmus속의 계통)

  • Yeong Chae Yoo;Nam-Ju Lee;Ga Yeong Jeon;Ok-Min Lee;Eun Chan Yang
    • Korean Journal of Environmental Biology
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    • v.41 no.4
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    • pp.345-363
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    • 2023
  • The genus Desmodesmus (Chodat) S.S. An, T. Friedl & E. Hegewald is ubiquitous in freshwater ecosystems, such as rivers, ponds, and wetlands. The actual species diversity and distribution of the genus is unknown because of morphological plasticity affected by habitats. Currently, 38 Desmodesmus species have been reported in Korea most of which transferred from the genus Scenedesmus recently, however, no phylogenetic relationships have been studied yet. Despite the challenges in analyzing relationships among Desmodesmus species through the morphology, ecology, and original description, this study focused on examining species-level relationships using the FBCC culture strains isolated from Korea. A total of 299 sequences (66 of 18S rRNA, 47 of atpB, 67 of petA, 52 of rbcL, and 67 of tufA) were newly determined and used for phylogenetic analysis. Four plastid genes tend to have higher variation than 18S rRNA in the variable sites and P-distance. From the combined phylogeny, the Desmodesmus included six clades such as Clade-1: D. pseudoserratus and D. serratus, Clade-2: D. communis, D. dispar, D. maximus, D. pannonicus, unidentified Desmodesmus sp., Clade-3: D. bicaudatus and D. intermedius, Clade-4: D. microspina, D. multivariablis, D. pleiomorphus, D. subspicatus, Clade-5: D. abundans, D. kissii, and D. spinosus, and Clade-6: D. armatus, D. armatus var. longispina, D. opoliensis, unidentified Desmodesmus spp. The new sequence data from FBCC strains will be used to identify species and study the molecular ecology of scenedesmacean green algae in freshwater ecosystems. The phylogenetic information from this study will expand our understanding of Desmodesmus species diversity in Korea.

Analysis of Genetic Diversity and Population Structure for Core Set of Waxy and Normal Maize Inbred Lines using SSR Markers (SSR 분자마커를 이용한 찰옥수수 및 종실용 옥수수 자식계통들의 핵심집단에 대한 유전적 다양성 및 집단구조 분석)

  • Sa, Kyu Jin;Kim, Jin-Ah;Park, Ki Jin;Park, Jong Yeol;Goh, Byeong Dae;Lee, Ju Kyong
    • Korean Journal of Breeding Science
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    • v.43 no.5
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    • pp.430-441
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    • 2011
  • Maize is divided into two types based on the starch composition of the endosperm in the seed, normal maize(or non-waxy maize) and waxy maize. In this study, genetic diversity and population structure were investigated among 80 waxy maize and normal inbred lines(40 waxy maize inbred lines and 40 normal maize inbred lines) using 50 SSR markers. A total of 242 alleles were identified at all the loci with an average of 4.84 and a range between 2 and 9 alleles per locus. The gene diversity values varied from 0.420 to 0.854 with an average of 0.654. The PIC values varied from 0.332 to 0.838 with an average of 0.602. To evaluate the population structure, STRUCTURE 2.2 program was employed to confirm genetic structure. The 80 waxy and normal maize inbred lines were separated with based on the membership probability threshold 0.8, and divided into groups I, II and admixed group. The 13 waxy maize inbred lines were assigned to group I. The 45 maize inbred lines including 7 waxy maize inbred lines and 38 normal maize inbred lines were assigned to group II. The 22 maize inbred lines with 20 waxy maize inbred lines and 2 normal maize inbred lines were contained in the admixed group. The cluster tree generated using the described SSR markers recognized three major groups at 31.7% genetic similarity. Group I included 40 waxy maize inbred lines and 11 normal maize inbred lines, and Group II included 27 normal maize inbred lines. Group III consist of only 2 normal maize inbred lines. The present study has demonstrated the utility of SSR analysis for the study of genetic diversity and the population structure among waxy and normal maize inbred lines. The information obtained from the present studies would be very useful for designing efficient maize breeding programs in Maize Experiment Station, Kangwon Agricultural Research and Extension Services.

Copepod Parasites of Commercial Bivalves in Korea -II. Copepods from Cultured Bivalves- (한국산 식용 이매패류에 기생하는 요각류 -II. 양식 이매패류에 기생하는 요각류-)

  • HO Ju-Shey;KIM Il-Hoi
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.24 no.6
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    • pp.369-396
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    • 1991
  • Nine species of copepod parasites are recorded from nine Korean cultured bivalves. One new species, Lichomolgus similis n. sp. is included, and other eight species are: Conchyliurus quintus, Pseudomyicola spinosus, Myicola ostreae, Ostrincola koe, O. japonica, Herrmannella longicaudata, Modiolicola bifidus, M gracilicaudus. The relationship between the copepod parasites and their host bivalves is discussed.

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CT and MRI Features of Localized Peritumoral Amyloidosis in a Patient with Head and Neck Mucosa-Associated Lymphoid Tissue Lymphoma: A Case Report (두경부 MALT 림프종 환자에서 나타난 국소적 종괴 주위 아밀로이증의 전산화단층촬영 및 자기공명영상 소견: 증례 보고)

  • Han Joon Kim;Hyun Sook Hong;Ji Yoon Kim
    • Journal of the Korean Society of Radiology
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    • v.82 no.5
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    • pp.1334-1340
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    • 2021
  • Amyloidosis has been reported to be associated with non-Hodgkin lymphoma. Amyloidosis and lymphoma can be related in two ways: lymphoma-associated systemic amyloidosis and peritumoral amyloidosis with lymphoma. We report a rare case of peritumoral amyloidosis in a patient with head and neck mucosa-associated lymphoid tissue lymphoma. On CT, the oropharyngeal mass showed an irregularly shaped soft-tissue density with multifocal amorphous calcifications and heterogeneous enhancement. On MRI, the mass showed heterogeneous low signal intensity on both T1- and T2-weighted images. On contrast-enhanced MR images, the mass showed good enhancement with several inner non-enhancing foci. Concurrent pathologies, such as peritumoral amyloidosis, should be considered when calcifications are noted in patients with pre-treatment lymphoma.

Seed Morphology of Euphorbia Section Anthacantha (Euphorbiaceae) and Related Taxa (대극속 Anthacantha절(대극과)과 근연분류군의 종자형태)

  • Na, Hee-Jung;Park, Ki-Ryong
    • Applied Microscopy
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    • v.40 no.4
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    • pp.219-228
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    • 2010
  • The seeds of 16 species from sect. Anthacantha and related taxa were examined using light and scanning electron microscopy to illucidate the boundary of the section and their relationship among species. Using six qualitative characters clustering analyses were conducted, and three types were recognized. Type I including species from sect. Anthacantha+sect. Meleuphorbia is characterized by the ovate shape, rounded at base and smooth along the ventral line. Type II including species from sect. Medusae+sect. Treisia-1 is squared in shape and are tuberculate. Tubercles are prominent along the ventral line. Type III (sect. Treisia-2 group) is mostly rounded, and as in type II, tubercles are prominent along the ventral line, but the unique crestae consisting of the grouping testa cells differed from the surface patterns of Types I and II. Based on the seed morphology, sects. Anthacantha and Meleuphorbia are closely related, which is well supported by the results from molecular and pollen morphological studies. Besides, sects. Treisia and Medusae are not closely related in terms of seed characters, and this is not consistent with the results of recent molecular studies.