• Title/Summary/Keyword: 유연관계 분석

Search Result 911, Processing Time 0.027 seconds

Development of EST-SSR Markers and Analysis of Genetic Diversity Using Persimmon (Diospyros kaki Thunb) Cultivars Collecting from Domestic (국내 수집 감 품종을 이용한 EST-SSR marker 개발과 유전적 다양성 분석)

  • Seo, Dong Hywi;Jung, Kyung Mi;Kim, Se Jong;Kim, Kyung-Min
    • Korean Journal of Plant Resources
    • /
    • v.26 no.4
    • /
    • pp.491-502
    • /
    • 2013
  • Persimmon (Diospyros kaki Thunb) fruit is one of the most important fruit and have been cultivated from ancient times in Korea. In this study, we found 16 EST-SSR markers that contained one or more EST-SSR sites from 246 cDNA sequences. The developing of EST-SSR marker analysis from 42 persimmon cultivars was compared by genetic relationships and morphological relationships using 6 qualitative traits (fruit related 6 traits) and 19 quantitative traits (flower related 19 traits). In this study, 25 primer sets were tested to identify PCR polymorphism and 14 potential EST-SSR primer pairs were selected. The result of morphological relationship EST-SSR marker analysis showed that the coefficient 0.02 was difficult to categorize in several groups. And then, coefficient 0.77 of genetic relationship showed that the group was classified as four groups. The result of correlation distance between genetic relationship and morphological relationship were investigated was low significance (-0.03). Our results also provided an optimized method for improvement of breeding efficiency and introduce of superior character at persimmon cultivars using EST-SSR markers which was useful for further investigation.

A Systematic Relationship of the Korean Symplocaceae Based on RAPD analysis (RAPD에 의한 한국산 노린재나무과 식물의 유연관계 분석)

  • Park, Sang-Hong;Lee, Joongku;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
    • /
    • v.37 no.3
    • /
    • pp.225-237
    • /
    • 2007
  • In order to estimate the genetic relationships among four taxa of Korean Symplocaceae and their regional populations, RAPDs analysis was performed. The length of the amplified DNA fragments ranged from 150 to 1,900 bp. Ninety-two RAPD bands were scored for 11 primers and the genetic distance was calculated with by Nei-Li's genetic dissimilarity. Deciduous and evergreen groups were clearly separated in the UPGMA analysis. Symplocos coreana was clustered as a distinct group, and S. sawafutagi and S. tanakana were also clustered at specific level, respectively. The RAPD data was useful to cognize the genetic variation and to discuss the relationships among Korean Symplocaceae

Genetic Relationships and Protein Variations during Development within the Drosophila melanogaster Species Group. III. allozyme Analysis (D. melunogaster species group의 발생단계에 따른 단백질의 변화와 유전적 유연관계 III. 효소분석)

  • 이택준;홍경자
    • The Korean Journal of Zoology
    • /
    • v.37 no.4
    • /
    • pp.580-591
    • /
    • 1994
  • 한국산 Drosophila melanogaster species group 8종의 생화학적 유연관계를 조사하기 위하여 3령기 유충, 말기 번데기, 성체의 세 발생단계에서 각각 효소 분석을 실시하였다. Rogers의 공식에 의해 각 발생단계 별로 8종간의 유전적 유사도를 계산하고 그 값을 근거로 UPGMA법에 의한 dendrogram을 작성하였다. 발생단계에 따라 관찰된 효소allele의 빈도는 큰 차이를 나타냈는데 이는 효소의 활성도나 유전자 발현의 발생단계별 차이로 생각되었다 이러한 발생단계별 효소분석 결과의 차이에도 불구하고 세 발생단계에서 모두 같은 pattern의 dendrogram이 얻어졌다. 따라서 대소 분석은 성체뿐만 아니라 유충이나 번데기와 같은 초기발생단계를 재료로 취할 때에도 종간 유연관계의 분석에 유용한 분석법이 될 것으로 생각할 수 있었다 세 발생단계에서 효소분석을 통해 얻어진 결과로 볼 때 D. melanogaster species group 8종은 크게 두개의 계통으로 나뉘었는데 D. melonogaster와 여. simulons, D. lutescens가 한 계통에 속했고 D. suzukii와 D. aurauia, D. biourariu, D. trioururia, D. rufa가 다른 한 계통에 속하고 있는 것으로 나타났다.

  • PDF

Interspecific Relationships of the Genus Leucophenga(Drosophiliae) by Electrophoretic Analysis of Protein (단백질 전기영동 분석에 의한 Leucophenga 속 (Drosophilidae) 초파리의 종간 유연관계)

  • 이택준;오준영
    • Animal Systematics, Evolution and Diversity
    • /
    • v.7 no.1
    • /
    • pp.65-72
    • /
    • 1991
  • The interspecific relationships of the genus Leucophenga, L.concilia, L.maculata, L.orientalis , and L.quinquenmaculipennis were investigated by soluble proteins analysis. the electrophoretic banding patterns of the four species analyzed by SDS-PAGE were scanned by densitormeter. The soluble protein patters of L.maculata and L.concilia by SDS-PAGE appeared similarly and on the other hand, those of L.quinquemaculipennis had a different forms from three other species. The genetic distance among the four species of TDE analysis was calculated by formula of the Aquadro and Avis(1981) . The genetic distance between L.maculata and L.concilia was 0.393 , the lowest of all and between L.maculata and L.quinquemaculipennis was 0.496, the highest of all. The dendrogram was established using UPGMA method based on genetic distance obtained by TDE analysis. Clustered patterns as follows ; first, L.maculata and L.concilia were clustered, and L.orientalis and L. quinquemaculipennis followed the firstone in order. In consequence, it seems that the interspecific relationship of L.quinquemaculipennis was farther from the other three species, while that of L.maculata and L.concilia was closer than that of L.orientalis.

  • PDF

Polymorphism and Genetic Relationships Among Magnaporthe grisea Isolates Obtained from Various Hosts by Using Repetitive DNA Sequences (기주가 다른 Magnaporthe grisea 균주간의 Polymorphism과 유전적 유연관계 분석)

  • 김홍기;김영태
    • Korean Journal Plant Pathology
    • /
    • v.12 no.4
    • /
    • pp.389-394
    • /
    • 1996
  • 도열병균, Magnaporthe grisea, 균주간의 유전적 유연관계를 분석하고 그들의 유전에 관한 '기본 정보를 얻고자 DNA polymorphism 분석을 실시하였다. 기주가 다른 도열병 균주들이 공시되었고 cloning에 의해 벼 도열병균 KJ201레이스 균주로부터 생성된 임의 선발 genomic clone들이 공시균주들간의 polymorphism을 밝히기 위해 사용되었던 바 그중 repectitive sequence를 보유한 repeated copy clone 하나가 선발되었다. Clone pMJ6에 의해 밝혀진 repetitive sequence는 Southern hybridization시 벼 분리균주에는 약 30개, 다른 기주 분리균에도 20∼33개의 밴드를 형성하였다. 반면 피 분리균주에는 단지 두 개의 밴드만을 나타내 분리기주가 다른 균주간에 뚜렷한 polymorphism이 존재하였으며 parsimony 분석에서도 역시 아주 먼 cluster를 형성하여 피 분리균은 다른 기주 분리균과 유전적으로 상당히 먼 것으로 추정되었다. 공시균의 genomic DNA를 HindIII로 처리했을 때 pMJ6에 의한 밴드양상은 공시균을 EcoRI으로 처리했을 때의 MGR probe의 밴드 양상과 유사하여 이 repeated copy clone이 도열병균주간의 유전적 유연관계를 분석하는데 MGR 못지않게 유용할 것으로 보인다.

  • PDF

Analysis of Genetic Relationship Among Collected Cymbidium goeringii Based on RAPD (RAPD를 이용한 춘란 수집종 20 품종의 유연관계 분석)

  • Kim, Tae Bok;Lee, Jin Jae;Song, Young Ju;Choi, Chang Hak;Cheong, Dong Chun;Yu, Young Jin
    • FLOWER RESEARCH JOURNAL
    • /
    • v.19 no.4
    • /
    • pp.225-230
    • /
    • 2011
  • This research was performed for making data-base of cross-breeding between Cymbidium goeringii cultivars. Morphological characteristics were investigated and then genetic relationship was analyzed. Collected 20 Cymbidium goeringii cultivars were clustered into 2 groups. Seven cultivars were clustered into group I, and thirteen cultivars were clustered into group II. Group I doesn't have leaf pattern. Group have leaf pattern. The genetic relationship among collected 20 Cymbidium goeringii cultivars was anaylzed using RAPD with ten 10-mers random primer. Eighty-nine bands were generated by RAPD. Among the rest, three bands were monomorphic and eight-six bands were polymorphic. Overall similarity degree ranged from 0.521 to 0.862. The result of RAPD analysis was clustered into 2 groups, too. Sixteen cultivars were clustered into GroupX, and four cultivars were clustered into GroupY. Result of classification with morphological characteristics and RAPD showed different pattern, but 4 cultivars of GroupY by RAPD analysis were included in groupby morphological characteristics. Crossbreeding combination among low related coltivars in RAPD analysis may get more efficient result.

The Relationship between Labor Market Flexibility and Outcome Variables and Its Moderating Effect on Union Power (노동시장의 유연성과 결과변수와의 관계 및 노조 힘의 조절효과)

  • Bae, Seung-Hyun;Park, Se-Yul
    • Management & Information Systems Review
    • /
    • v.30 no.4
    • /
    • pp.475-509
    • /
    • 2011
  • Taking 195 Korean businesses and sorting them out according to the unit types, this study looks into how flexibility strategy in labor market, which consists of numerical flexibility and functional flexibility, takes effect on the organization's outcome variable, which in turn consists of productivity, labor-management cooperation, and job security. In addition, the present study analyzes the role of labor union's moderating effect on the relationship among labor market flexibility, labor-management cooperation, and job security. It is found out as a result that numerical flexibility has no meaningful relation with productivity, labor-management cooperation, and job security, while functional flexibility has a considerably positive relation with them. This result confirms the importance of functional flexibility of business strategy in labor market. The West has continuously insisted the importance of functional flexibility, pointing out problems of numerical flexibility. On the other hand, considering that this study has confirmed functional flexibility's meaningful relation, while it has not found out numerical flexibility's negative relation, it is necessary to study further on the relationship between these two kinds of flexibility. The result of analysis on the role of union power's moderating effect confirms only the union power's interaction effect in the relation between numerical flexibility and labor-management cooperation. The possibility of union's opportunistic behavior can be detected in this result.

  • PDF

The Isozyme Variations of Euphaedusa fusaniana in Korea (한국산 부산입술대고둥 (Euphaedusa fusaniana)의 아이소자임 변이)

  • 황보학;이준상;조동현
    • The Korean Journal of Malacology
    • /
    • v.9 no.1
    • /
    • pp.39-45
    • /
    • 1993
  • 한국산 부산입술대고둥의 지역 집단간에 있어 유전적 변이, 종내 유연관계를 밝히기 위하여 애월, 세화, 삼척, 통도사, 거문도 및 여수 지역에서 채집한 총 180개체를 대상으로 전기영동을 실시하였고 여기서 나타난 16개의 유전자를 분석하였다. 각 집단의 유전전 변이 정도를 조사한 결과 전 집단의 평균 대립인자 수 (A)는 1.528이고, 평균 다형형의 빈도(P)는 45.5%이며, 평균이형접합자(H$_{D}$)는 0.205로 나타났다. 이중 삼척집단의 대립인자 수는 1.46으로 가장 낮고, 애월집단의 다형형의 빈도는 28.58%, 통도사의집단은 57.14%로 가장 낮은 빈도를 나타냈다. 각 집단간 유전적 유연관계를 분석한 결과 6개 집단간의 평균 유전적 근연치는 S=0.716이었고, 애월과 삼척집단은 0.903으로 가장 가까운 유전적 유연관계를 4보여주고 있다. 여수집단과 삼척집단의 유전적 유연관계는 0.562로 가장 낮은 값을 나타냈다. Nei의 공식에 따라 각 집단의 유전적 차이치(D)를 계산한 결과 평균D값은 0.267이며, 이중 애월과 삼척집단이 0.067로 가장 가깝게 나타났고 이는 Roger에 의한 유전적 근연관계와 유사한 양상을 보였다.

  • PDF

Genetic variations and relationships of Phragmites japonica and P. communis according to water environment change (수환경변화에 따른 갈대와 달뿌리풀의 유전적 변이 및 유연관계)

  • Kim, Yong-Hyun;Kim, Joo-Hwan
    • Korean Journal of Plant Resources
    • /
    • v.22 no.2
    • /
    • pp.152-158
    • /
    • 2009
  • We performed RAPD analysis to investigate the inter-/intraspecific relationships and regional variations of Phragmites japonica and P. communis according to the environmental change. One hundred and fourty nine genetic effective polymorphic bands between 300 bp and 1,900 bp were marked from RAPD PCR with nine oligoprimers. From the RAPD analysis by Nei-Li's genetic distance, the dissimilarity indices among the populations of Phragmites japonica were relatively low from 0.012 to 0.061, and Phragmites communis were also low from 0.033 to 0.095. It showed the close genetic relationships among the same species populations, and both species were distinctly independent with relatively high level of dissimilarity indices (0.043 - 0.132). The obvious genetic markers to distinguish two species were confirmed and those profiles were suggested. From the UPGMA phenogram by RAPD analysis, both species showed the water environment related cluster patterns by distributional regions. RAPD analysis was useful to delimit two species taxonomically and to investigate the genetic relationships among inter-/intraspecific populations.

Genetic Divergence and Relationship Among Four Abalone Species by Isozyme and AFLP analyses (Isozyme 및 AFLP분석에 의한 전복류 4종간의 유전적 차이 및 유연관계)

  • Park Choul-ji;Kijima Akihiro
    • Journal of Aquaculture
    • /
    • v.18 no.4
    • /
    • pp.252-259
    • /
    • 2005
  • Isozyme and AFLP analyses were examined to estimate the utilities of them as a genetic marker. The utilities were evaluated by genetic divergence and relationships among the four distinct abalone species; Haliotis discus hannai collected from northeast coast of Japan and Yellow-Sea coast of China, H. rufescens collected from west coast of USA, H rubra collected from southeast coast of Australia and H midae collected from Cape Town of South Africa. Isozyme and AFLP analyses showed a clear genetic divergence between every pair of species. Genetic relationships among the low species estimated by isozyme and AFLP analyses reflected to geographical distribution and morphological characteristics. In conclusion, Isozyme and AFLP analyses are suitable genetic markers far estimates of genetic divergence and relationship among abalone species.