• The Korean Journal of Mycology
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• v.42 no.1
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• pp.34-39
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• 2014

In this study, the community structures of arbuscular mycorrhizal fungi (AMF) in rhizospheres of Camellia japonica and neighboring woody plants in Wando, Korea were investigated. Rhizospheres of C. japonica and other woody plants were dominated by the same species, Acaulospora mellea, but Shannon's index, species richness and total spore numbers of the AMF communities were higher in non-C. japonica than in neighboring plants. Regardless of host plant species, the frequency of A. mellea was significantly high comparing with other AMF species. The community similarity of AMF within C. japonica was significantly higher than between C. japonica and neighboring plants or neighboring plants (p<0.005). Results showed that AM fungal communities in rhizospheres of C. japonica have unique community structure and are different from that of neighboring host plants, suggesting that community structure of AMF could be influenced by host plant species.

• Korean Journal of Microbiology
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• v.46 no.3
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• pp.278-285
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• 2010

We examined the distribution of exopolysaccharide (EPS) producing bacteria population in rhizosphere soils of domestic medicinal herbs; Angelica sinensis, Atractytodes japonica, Achyranthes japonica, Anemarrhena asphodeloides, and Astragalus membranaceus. Fifty-six percent of the total isolates from rhizosphere soil of Angelica sinensis were EPS producing bacteria, suggesting the dominance of EPS producing bacteria in rhizosphere soil of Angelica sinensis. EPS producing bacteria were enumerated in root system (rhizosphere soil, rhizoplane, inside of root) of Angelica sinensis. Bacterial density of rhizosphere soil, rhizoplane, and inside of root were distributed $9.0{\times}10^6CFU/g{\cdot}soil$, $7.0{\times}10^6CFU/g{\cdot}soil$, and $1.4{\times}10^3CFU/g{\cdot}soil$, respectively. EPS producing bacteria from rhizosphere soil were categorized into five major phylogenetic groups: Alphaproteobacteria (4 strains), Betaproteobacteria (6 strains), Firmicutes (2 strains), Actinobacteria (3 strains), and Bacteroidetes (1 strain) subdivisions. Also, the EPS producing isolates from rhizoplane were distributed as 7 strains in Alphaproteobacteria, 3 strains in Betaproteobacteria, 2 strains in Actinobacteria, 3 strains in Bacteroidetes, and 1 strain in Acidobacteria subdivisions. All of the EPS producing bacteria inside of root belong to genus Chitinophaga. Burkholderia caribiensis DR14, Terriglobus sp. DRP35, and Rhizobium hainanense SAP110 were selected in 112 EPS producing bacteria. These appeared to have produced high levels of exopolysaccharide 6,555 mpa.s, 3,275 mpa.s, and 1,873 mpa.s, respectively. The purified EPS was analyzed Bio-LC. As neutral sugars, glucose, galactose, mannose were detected and as amino sugars, galactosamine and glucosamine were detected. Especilally, analysis of Bio-LC showed that Rhizobium hainanense SAP110 produced glucose (60~89%) and glucosamine (8.5%) as major neutral sugar and amino sugar, respectively.

• The Korean Journal of Mycology
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• v.44 no.2
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• pp.82-86
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• 2016

In this study, we investigated the spore diversity of arbuscular mycorrhizal fungi (AMF) in rhizospheres of a post-mining area and a natural forest area in Jecheon, Korea. The rhizospheres of the post-mining areas were dominated by Acaulospora mellea, while those of the natural forest area were dominated by Ambispora leptoticha. The number of AMF spores in rhizospheres of the post-mining area was significantly higher than that in the rhizospheres of the natural forest area. Although the diversity index of each area showed no significant difference, the community similarity of AMF within the rhizospheres of natural forest area was significantly higher than that observed within those of post-mining area. These results showed that AM fungal communities in rhizospheres could change because of the degree of disturbance.

• The Korean Journal of Ecology
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• v.22 no.1
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• pp.7-11
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• 1999

The measurement of pH in the rhizosphere soil was conducted to clarify whether the growth of pokeberry plants affect the acidity of rhizosphere soil in two environmentally contrasting area Ulsan and Chongju city. The rhizosphere pH between 5.25 and 5.33 was shown in the pokeberry stand at Mt. Boomo located at Chongju. The rhizosphere pH of pokeberry stands at Mt. Bongdae, Mt. Sinsun and Mt. Totchil was below 5.0, and did not differ with depth and distance from the main axis of root. At Mt. Bongdae, however, the pH in the rhizosphere soil was significantly changed with soil depths though that was not changed horizontally. The rhizosphere pH at top soil was lower than that at subsoil, which indicates the fact that soil acidification at Mt. Bongdae was not caused by pokeberry plants. Furthermore, the rhizosphere pH did not change with the growth of pokeberry plants. These results indicate that the hypothesis that pokeberry plants acidify local soil environment should be reconsidered.

• Horticultural Science & Technology
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• v.28 no.5
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• pp.783-789
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• 2010

The effective method for heating root-zone during winter season was studied in the aspects of growth, yield and economics for tomato ($Solanum$ $lycopersicum$) in perlite bag culture. There were four root-zone heating treatments: two hours heating from one hour before to one hour after sunrise, four hours from two hours before to two hours after sunrise, 15 hours after sunset, and no heating. The growth characteristics of the upper parts of plants were not significantly different among the treatments, but root volume increased with longer heating of the root zone. The Plant Development Index, using stem diameter and the length between growing tip and the upper flowering truss, showed relation between yield per cluster and growth pattern. The treatment heating for four hours was the most economic in terms of growth and yield of tomato.

• Korean Journal of Soil Science and Fertilizer
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• v.41 no.1
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• pp.9-17
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• 2008

The presence of thiosulfate oxidizing bacteria was examined in rhizosphere soils of 19 economically important plant species belonging to 10 different families. The results showed that the thiosulfate oxidizing bacteria were present in all the tested rhizosphere soils, and the total 32 thiosulfate oxidizing bacteria were recovered. Furthermore, the biochemical characterization revealed that 56% and 44% of the isolates belonged to the obligate chemolithoautotrophs and facultative heterotrophs, respectively. The isolates ATSR15P utilized 19.17 mM of thiosulfate and accumulated 11.65 mM of sulfate in the medium. Concurrently, the decrease in pH of the medium was observed. This study comprehensively demonstrates that the active sulfur oxidation is a ubiquitous phenomenon in the rhizosphere of crop plants in Korea.

• Applied Biological Chemistry
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• v.49 no.3
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• pp.175-179
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• 2006

This study was carried out to investigate the change of rhizosphere microflora in paddy soils of long-term application of same fertilizer by single cropping. Treatments consisted of no fertilizer, NPK, PK, NK, NP and NPK + compost and the same fertilizer has been applied to the soil of each treatment for thirty five years. Any remarkable difference of the microbial population structure was not detected from the rhizosphere of Hwayeongbyeo and that of Hwasambyeo. However, slight difference of dominant microbial species in the rhizosphere was recognized between different fertilization practice. The bacterial population in the rhizosphere was steadily reduced over time after rice plant setting out, while actinomycetal population was increased over time. The increase of actinomycetal population was the highest in the NPK + compost treatment, suggesting the effect of organic matters in the change of actinomycetal population. As for the aerobic culturable bacterial diversity, Bacillus megaterium, B. mycoides, B. licheniformis and B. subtilis were dominants in genus Bacillus, and Streptomyces spororaveus, S. canus, S. tauricus and S. galbus in genus Streptomyces and genus Micromonospora was another dominant in actinomycetes.

• Korean Journal of Environmental Agriculture
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• v.30 no.4
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• pp.466-472
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• 2011

BACKGROUND: Soybean [Glycine max (L.) Merrill] is a legume and an important oil crop worldwide. This study was conducted to evaluate the possible impact of transgenic soybean cultivation on the soil microbial community. METHODS AND RESULTS: Microorganisms were isolated from the rhizosphere soils. Microbial community was identified based on the culture-dependent and molecular biology methods. The total numbers of bacteria, fungi, and actinomycete in the rhizosphere soils cultivated with transgenic and non-transgenic soybeans were similar to each other, and there was no significant difference between transgenic and non-transgenic soybeans. Dominant bacterial phyla in the rhizosphere soils cultivated with transgenic or non-transgenic soybeans were Actinobacteria, Firmicutes, and Proteobacteria. The microbial communities in transgenic and non-transgenic soybean soils were characterized using the denaturing gradient gel electrophoresis (DGGE). The DGGE profiles showed the different patterns, but didn't show significant difference to each other at 0.05 significance level. DNAs were isolated from soils cultivating transgenic or non-transgenic soybeans and analyzed for persistence of transgenes in the soil by using PCR. PCR analysis revealed that there were no amplified ${\gamma}$-tmt and bar gene in soil DNA. CONCLUSION(S): The results of this study suggested that microbial community of soybean field were not significantly affected by cultivation of the transgenic soybeans.

• Journal of Bio-Environment Control
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• v.18 no.4
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• pp.413-419
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• 2009

The appropriate dripper position in perlite bag was investigated for tomato production. Drippers were laid at 5(F5), 15cm (F15) away from the stem base or 5cm at first and then moved to 15cm later (M5-15). Roots were developed more near the stem base in F5, while less in F15. Roots were distributed evenly in M5-15. In vertical distribution of water in perlite bag, water content was higher as it went deeper with the variation by dripper positions. Yield was high in F15 and low in F5. In conclusion the position of dripper is the best at 15cm from the stem base in perlite bag culture in view of root distribution and yield.

• Korean Journal of Environmental Agriculture
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• v.32 no.2
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• pp.95-101
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• 2013

BACKGROUND: Rice (Oryza sativa) is the most important staple food of over half the world's population. This study was conducted to evaluate the possible impact of transgenic rice cultivation on the soil microbial community. METHODS AND RESULTS: Microorganisms were isolated from the rhizosphere of GM and non-GM rice cultivation soils. Microbial community was identified based on the culture-dependent and molecular biology methods. The total numbers of bacteria, fungi, and actinomycete in the rhizosphere soils cultivated with GM and non-GM rice were similar to each other, and there was no significant difference between GM and non-GM rice. Dominant bacterial phyla in the rhizosphere soils cultivated with GM and non-GM rice were Actinobacteria, Firmicutes, and Proteobacteria. The microbial communities in GM and non-GM rice cultivated soils were characterized using the denaturing gradient gel electrophoresis (DGGE). The DGGE profiles showed similar patterns, but didn't show significant difference to each other. DNAs were isolated from soils cultivating GM and non-GM rice and analyzed for persistence of inserted gene in the soil by using PCR. The PCR analysis revealed that there were no amplified protox gene in soil DNA. CONCLUSION(S): These data suggest that transgenic rice does not have a significant impact on soil microbial communities, although continued research may be necessary.