• 제목/요약/키워드: $\beta$-Xylosidase

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Cloning and Characterization of Ginsenoside Ra1-Hydrolyzing ${\beta}$-D-Xylosidase from Bifidobacterium breve K-110

  • Hyun, Yang-Jin;Kim, Bo-Mi;Kim, Dong-Hyun
    • Journal of Microbiology and Biotechnology
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    • 제22권4호
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    • pp.535-540
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    • 2012
  • ${\beta}$-D-Xylosidase (E.C. 3.2.1.37) from Bifidobacterium breve K-110, which hydrolyzes ginsenoside Ra1 to ginsenoside Rb2, was cloned and expressed in Escherichia coli. The ($His_6$)-tagged recombinant enzyme, designated as XlyBK-110, was efficiently purified using $Ni^{2+}$-affinity chromatography (109.9-fold, 84% yield). The molecular mass of XylBK-100 was found to be 55.7 kDa by SDS-PAGE. Its sequence revealed a 1,347 bp open reading frame (ORF) encoding a protein containing 448 amino acids, which showed 82% identity (DNA) to the previously reported glycosyl hydrolase family 30 of Bifidobacterium adolescentis ATCC 15703. The $K_m$ and $V_{max}$ values toward p-nitrophenyl-${\beta}$-D-xylopyranoside (pNPX) were 1.45mM and 10.75 ${\mu}mol/min/mg$, respectively. This enzyme had pH and temperature optima at 6.0 and $45^{\circ}C$, respectively. XylBK-110 acted to the greatest extent on xyloglucosyl kakkalide, followed by pNPX and ginsenoside Ra1, but did not act on p-nitrophenyl-${\alpha}$-L-arabinofuranoside, p-nitrophenyl-${\beta}$-D-glucopyranoside, or p-nitrophenyl-${\beta}$-D-fucopyranoside. In conclusion, this is the first report on the cloning and expression of ${\beta}$-D-xylosidase-hydrolyzing ginsenoside Ra1 and kakkalide from human intestinal microflora.

Paenibacillus sp. DG-22로부터 β-xylosidase의 정제 및 특성분석 (Purification and Characterization of β-Xylosidase from Paenibacillus sp. DG-22)

  • 이태형;임평옥;이용억
    • 생명과학회지
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    • 제17권10호
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    • pp.1341-1346
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    • 2007
  • Paenibacillus sp. DG-22로부터 세포내 효소인 ${\beta}-xylosidase$가 이온교환, 소수성 상호작용, 겔여과 크래마토그래피에 의해 순수하게 정제되었다. 이 효소의 분자량은 겔여과에 의해서는 156,000으로, SDS-PACE에 의해서는 80,000으로 측정되었는데 이것은 이 효소가 동일한 두 소단위로 구성되어 있음을 나타낸다. 정제된 효소는 $65^{\circ}C$와 pH 5.5에서 최대 활성을 나타내었다. 이 효소는 $60^{\circ}C$에서 60분까지 초기 활성의 80%를 유지하였고 $65^{\circ}C$에서 25분의 반감기를 가지고 있었다. 이 효소는 기질로서 pNPX에 매우 특이적이었고 다른 p-nitrophenyl 글리코시드들과 자일란에는 활성을 나타내지 않았다. pNPX에 대한 $K_m$$V_{max}$는 각각 0.53 mM과 3.18 U/mg단백질이었다. 이 ${\beta}-xylosidase$$Ag^+,\;Fe^{2+},\;Hg^{2+}$$Zn^{2+}$에 의해 강하게 억제되었으며 DTT에 의해서 약간 활성화되었다. 자일로바이오스, 자일로트라이오스 및 자일로데트라오스로부터의 가수분해 산물은 자일로오스이었다.

β-Xylosidase and β-mannosidase in combination improved growth performance and altered microbial profiles in weanling pigs fed a corn-soybean meal-based diet

  • Liu, Shaoshuai;Ma, Chang;Liu, Ling;Ning, Dong;Liu, Yajing;Dong, Bing
    • Asian-Australasian Journal of Animal Sciences
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    • 제32권11호
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    • pp.1734-1744
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    • 2019
  • Objective: In this study, two glycosidases (XMosidases), ${\beta}$-xylosidase and ${\beta}$-mannosidase, were investigated on their in vitro hydrolysis activities of feed and on the improvement of growth performance in vivo in weanling pigs. Methods: Enzyme activities of XMosidases in vitro were evaluated in test tubes and simulation of gastric and small intestinal digestion, respectively, in the presence of NSPase. In vivo study was performed in 108 weaned piglets in a 28-d treatment. Pigs were allotted to one of three dietary treatments with six replicate pens in each treatment. The three treatment groups were as follows: i) Control (basal diet); ii) CE (basal diets+CE); iii) CE-Xmosidases (basal diets+ CE+${\beta}$-xylosidase at 800 U/kg and ${\beta}$-mannosidase at 40 U/kg). CE was complex enzymes (amylase, protease, xylanase, and mannanase). Results: In vitro XMosidases displayed significant activities on hydrolysis of corn and soybean meal in the presence of non-starch polysaccharide degrading enzymes (xylanase and ${\beta}$-mannanase). In vitro simulation of gastric and small intestinal digestion by XMosidases showed XMosidases achieved $67.89%{\pm}0.22%$ of dry matter digestibility and $63.12%{\pm}0.21%$ of energy digestibility at $40^{\circ}C$ for 5 hrs. In weanling pigs, additional XMosidases to CE in feed improved average daily gain, feed conversion rate (p<0.05), and apparent total tract digestibility of crude protein (p = 0.01) and dry matter (p = 0.02). XMosidases also altered the gut bacterial diversity and composition by increasing the proportion of beneficial bacteria. Conclusion: Addition of a complex enzyme supplementation (contained xylanase, ${\beta}$-mannanase, protease and amylase), XMosidases (${\beta}$-xylosidase and ${\beta}$-mannosidase) can further improve the growth performance and nutrient digestion of young pigs.

Purification and Characterization of ${\beta}$-Xylosidase from Bifidobacterium breve K-110

  • Shin, Ho-Young;Han, Yeo-Ok;Han, Myung-Joo;Lee, Jang-Yeon;Lee, Ji-Hyun;Kim, Dong-Hyun
    • 대한약학회:학술대회논문집
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    • 대한약학회 2002년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2
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    • pp.333.2-333.2
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    • 2002
  • Kakkalide from Puerariae Flos expresses pharmacological actions after biotransformation to irisolidone by intestinal bacteria. B. breve K-110 was isolated as a bacterium metabolizing kakkalide. Therefore. we purified kakkalide-metabolizing p-Xylosidase from B. breve K-110. ${\beta}$-Xylosidase from B. breve K-110 (isolated from Korean intestinal microflora) was induced by kakkalide. We used defined medium contating 1mM kakkalide for the cultivationof B. breve K-110. (omitted)

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Catabolite Repression of the Bacillus stearothermophilus $\beta$-Xylosidase Gene (xylA) in Bacillus subtilis

  • Cho, Ssang-Goo;Choi, Yong-Jin
    • Journal of Microbiology and Biotechnology
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    • 제8권1호
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    • pp.21-27
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    • 1998
  • The xylA gene of Bacillus stearothermophilus encoding the major ${\beta}$-xylosidase was previously cloned and sequenced. In the present study we examined the regulation of the cloned xylA gene expression in Bauillus subtilis MW15 carrying the xylA::aprA fusion plasmids. The induction of the fused xylA gene expression remained uninfluenced by any of the carbon sources tested but the gene expression was repressed about 2-3 fold in the presence of glucose. Two CRE-like sequences (CRE-1: nucleotides + 124 to +136 and CRE-2: +247 to +259) were recognized within the reading frame region of the xylA gene. The deletion experiments showed that the CRE-2 sequence had a role in catabolite repression (CR) as a true CRE of the xylA gene, but the CRE-1 had no effect on CR of the xylA gene expression. Surprisingly, the deletion of the CRE- 1 sequence reduced about 2~3 fold of the expression of the xylA fused gene. The repression ratios of the xylA gene expression were estimated to be about 0.4 from the assay of subtilisin activity, and about 0.3 at the level of transcription by determining the amounts of xylA transcripts in B. subtilis. While, the level of CR of the xylA gene was assessed to be about l0-fold in previous work when the relative amounts of the xylA transcripts were measured in B. stearothermophilus.

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큰느타리버섯 수확 후 배지로부터 리그닌섬유소분해효소 생산 (Production of Lignocellulytic Enzymes from Spent Mushroom Compost of Pleurotus eryngii)

  • 임선화;김종군;이윤혜;강희완
    • 한국균학회지
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    • 제40권3호
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    • pp.152-158
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    • 2012
  • 큰느타리 수확 후 배지(spent mushroom compost, SMC)로부터 목질분해효소인 ${\alpha}$-amylase (EC 3.2.1.1), lignin peroxidase (EC 1.11.1.14), laccase (EC 1.10.3.2), xylanase (EC 3.2.1.8), ${\beta}$-xylosidase (EC 3.2.1.37), ${\beta}$-glucosidase (EC 3.2.1.21) cellulase (EC 3.2.1.4)가 다양한 buffer로 추출 되었으며 1 g SMC당 5 volume으로 첨가하고 2시간 동안 $4^{\circ}C$에서 200 rpm속도로 진탕배양 시에 최적 효소회수율을 보였다. ${\alpha}$-Amylase는 2.10에서 2.80 U/g (SMC)의 효소활성을 보였으며 ${\beta}$-glucosidase와 ${\beta}$-xylosidase는 0.1 U/g 이하의 가장 낮은 효소활성이 나타났다. Cellulase는 2.80 U/g와 xylanse는 5.0 U/g이상의 비교적 높은 효소회수율을 보였다. 큰느타리버섯 SMC 추출물은 상업용 laccase와 탈색효과 cellulase와는 filter paper분해활성을 비교하여 산업적 적용을 평가하였다.

Exo-O-Glycosylhydrolases in Korea Ginseng Roots

  • Yelena V.Sundukova;Lee, Mi-Ja;Park, Hoon
    • Journal of Ginseng Research
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    • 제24권2호
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    • pp.89-93
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    • 2000
  • 6년생 고려인삼근(panax ginseng C.A. Meyer)중 수종의 exo-O-glycosylhydrolase 활성을 중심부와 주피부로 나누어 생육시기별로 조사하였다. $\alpha$-D-galactosidase, $\beta$-D-galactosidase, $\alpha$-L-man-nosidase , N-acetyl-$\beta$-D-giucosarninidase, $\alpha$-D-galactosidase, $\alpha$-L-arabinosidase와 $\beta$-D-fucosidase는 중심부와 주피부에서 모두 활성이 있으나 $\beta$-L-mannosidase, $\alpha$-D-xylosidase, $\beta$-D-xylosidase, $\alpha$-D-rhamnosidase와 $\beta$-D-glucosidase의 효소활성은 검색되지 않았다. $\beta$-D-galactosidase의 활성은 연중 높게 유지되었고 $\alpha$-L-mannosidase의 활성도 높은 경향이었다. 인삼근중 탄수화물 대사효소의 활성은 생육시기와 환경조건 및 부위에 따라 매우 다른 양상을 나타내었다.

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젖산균 발효를 통한 녹차 추출물의 Epigallocatechin 함량의 증대 (Increase of Epigallocatechin in Green Tea Extract by Lactic Acid Bacteria Fermentation)

  • 최찬영;박은희;주영운;김명동
    • 한국미생물·생명공학회지
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    • 제44권1호
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    • pp.62-67
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    • 2016
  • 전통발효 식품으로부터 젖산균을 분리하고, ${\beta}$-glucosidase, ${\beta}$-glucuronidase, ${\beta}$-xylosidase, ${\beta}$-galactosidase, ${\beta}$-arabinofuranosidase, ${\beta}$-arabinosidase, ${\beta}$-arabinopyranosidase 등 생물전환과 관련된 유용 효소활성을 조사하였다. 효소활성 평가를 통하여 선발된 9점의 젖산균 발효에 의한 epigallocatechin-3-gallate(EGCG), epigallocatechin(EGC), epicatechin gallate(ECG), 및 epicatechin(EC)의 함량 변화를 조사하였다. 배추 김치에서 분리된 Leuconostoc mesenteroides MBE1424로 명명된 균주는 발효에 의하여 카테킨 중 EGC의 함량을 약 60% 증가시켰으며, 배양온도 $40^{\circ}C$에서 가장 우수한 비성장속도를 나타내어 기존에 보고된 균주보다 상대적으로 내열성이 우수한 것으로 판단되었다. Leuconostoc mesenteroides 균주는 녹차 추출물의 생물전환에 필요한 유용한 효소계를 보유하고 있는 것으로 추정되었다.

Production of Cellulase and Xylanase by Aspergillus niger KKS

  • Kang, Seong-Woo;Kim, Seung-Wook
    • Journal of Microbiology and Biotechnology
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    • 제4권1호
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    • pp.49-55
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    • 1994
  • A fungal strain capable of producing extracellular cellulase was isolated from farmland. It was identified as Aspergillus niger, and named Aspergillus niger KKS. Production of cellulase and xylanase by the A. niger KKS was studied through a shake-flask culture. The effects of culture conditions such as inoculum size, temperature, pH, and medium composition on the cellulase and xylanase production were examined. The optimum temperature and pH for the enzyme production were $30^{\circ}C$ and pH 7.0, respectively. The optimized medium was composed of 2.0% (w/v) rice straw, 0.5% (w/v) proteose peptone, 0.5% (w/v) $KH_2 PO_4$, 0.05% (w/v) yeast extract, 0.01% (w/v) $CoSO_4 \cdot 7H_2O$, and 0.05% (w/v) $CuSO$_4$\cdot 5H_2O$. When the strain was incubated with the optimized medium, it gave the activities of endoglucanase, $\beta$-glucosidase, $\beta$-xylosidase, xylanase were 3.80, 4.20, 4.00, 80.0 (IU/mL), respectively. Filter paper and cotton activities were 0.68 and 0.045 (IU/mL), respectively. The results of this study show that A. niger KKS is a potential organism with a wide spectrum of enzyme activities, such as those of $\beta$-glucosidase, $\beta$-xylosidase, and xylanase.

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Complete genome sequence of Lactococcus taiwanensis strain K_LL004, encoding hydrolytic enzymes of plant polysaccharides isolated from grasshopper (Oxya chinensis sinuosa)

  • Hyunok Doo;Hyeri Kim;Jin Ho Cho;Minho Song;Eun Sol Kim;Jae Hyoung Cho;Sheena Kim;Gi Beom Keum;Jinok Kwak;Sriniwas Pandey;Hyeun Bum Kim;Ju-Hoon Lee
    • Journal of Animal Science and Technology
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    • 제65권3호
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    • pp.679-682
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    • 2023
  • The Lactococcus taiwanensis strain K_LL004 was isolated from the gut of a grasshopper (Oxya chinensis sinuosa) collected from local farm in Korea. L. taiwanensis strain K_LL004 is the functional probiotic candidate with an ability to hydrolyse plant polysaccharides. The complete genome of the L. taiwanensis strain K_LL004 contains one circular chromosome (1,995,099 bp) with a guanine + cytosine (GC) content of 38.8%. Moreover, 1,929 Protein-coding sequence, 19 rRNA genes, and 62 tRNA genes were identified based on results of annotation. L. taiwanensis strain K_LL004 has a gene, which encodes hydrolytic enzymes such as beta-glucosidase and beta-xylosidase, that hydrolyzes plant polysaccharides.