• 제목/요약/키워드: xSelection

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Optimal Design for Marker-assisted Gene Pyramiding in Cross Population

  • Xu, L.Y.;Zhao, F.P.;Sheng, X.H.;Ren, H.X.;Zhang, L.;Wei, C.H.;Du, L.X.
    • Asian-Australasian Journal of Animal Sciences
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    • v.25 no.6
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    • pp.772-784
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    • 2012
  • Marker-assisted gene pyramiding aims to produce individuals with superior economic traits according to the optimal breeding scheme which involves selecting a series of favorite target alleles after cross of base populations and pyramiding them into a single genotype. Inspired by the science of evolutionary computation, we used the metaphor of hill-climbing to model the dynamic behavior of gene pyramiding. In consideration of the traditional cross program of animals along with the features of animal segregating populations, four types of cross programs and two types of selection strategies for gene pyramiding are performed from a practical perspective. Two population cross for pyramiding two genes (denoted II), three population cascading cross for pyramiding three genes(denoted III), four population symmetry (denoted IIII-S) and cascading cross for pyramiding four genes (denoted IIII-C), and various schemes (denoted cross program-A-E) are designed for each cross program given different levels of initial favorite allele frequencies, base population sizes and trait heritabilities. The process of gene pyramiding breeding for various schemes are simulated and compared based on the population hamming distance, average superior genotype frequencies and average phenotypic values. By simulation, the results show that the larger base population size and the higher the initial favorite allele frequency the higher the efficiency of gene pyramiding. Parents cross order is shown to be the most important factor in a cascading cross, but has no significant influence on the symmetric cross. The results also show that genotypic selection strategy is superior to phenotypic selection in accelerating gene pyramiding. Moreover, the method and corresponding software was used to compare different cross schemes and selection strategies.

Evolution of a Productive Multivoltine x Bivoltine Hybrid, CAUVERY (BL67x CSR101) of Silkworm, Bombyx zori L.

  • Rao, D.Raghavendra;Premalatha, V.;Singh, Ravindra;Kariappa, B.K.;Jayaswal, K.P.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.4 no.2
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    • pp.121-126
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    • 2002
  • Breeding programme was initiated during November, 1995 with the main objective to breed productive multivoltine breeds/ hybrids with suitable genetic constitution to suit the fluctuating tropical climate prevailed in India. Two multivoltine breeds viz., BL-24 and BL-27 selected were as breeding resource materials from the silkworm germplasm maintained at Central Sericul-tural Research and Training Institute, Mysore. By adopting hybridization, backcrossing inbreeding and selection, a new multivoltine breed namely BL-67. This breed spins light greenish yellow cocoons and cocoon shape is oval with medium to coarse grains. The evolved breed was crossed with five tropical bivoltine breeds viz., NB4D2, CSR2, CSR5, CSR18 and CSR101 to study the combining ability, and identified a superior hybrid, BL67 ${\times}$ CSR101, named as CAUVERY, The hybrid is characterized by high pupation rate (>95%), high shell weight (> 35 cg), high cocoon shell ratio (> 20%), longer filament length (> 900 m) and high neatness (93) with a renditta of 6.5 producing 2A-3A grade silk. The hybrid is selected for Race Autho-rization test of Central Silk Board.

Real-time Optimization of H.264 Software Encoder on Embedded DSP System (임베디드 DSP 기반 시스템을 위한 H.264 소프트웨어 부호기의 실시간 최적화)

  • Roh, Si-Bong;Ahn, Hee-June;Lee, Myeong-Jin;Oh, Hyuk-Jun
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.34 no.10C
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    • pp.983-991
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    • 2009
  • While H.264/AVC is in wide use for multimedia applications such as DMB and IPTV service, we have limited usage cases for embedded real-time applications due to its high computational demand. The paper provides judicious guide line for optimization method selection, by presenting the detailed experiments data through the development process of a real time H.264 software encoder on embedded DSP. The experimental analysis includes an intensive profiling analysis, fast algorithm application, optimal memory assignment, and intrinsic-based instruction selection. We have realized a real-time software that encodes CIF resolution videos 15 fps on TMS320DM64x processors.

Cloning of nif genes from Enterobacter agglomerans in Escherichia coli. (Enterobacter agglomerans의 질소고정유전자 Cloning)

  • 정건섭;이정기;민태익;변유량;유주현
    • Microbiology and Biotechnology Letters
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    • v.15 no.2
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    • pp.116-121
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    • 1987
  • In order to cloning of the nif genes of Enterobacter agglomerans NFB-264, the digested total DNA of the strain was ligated to pBR 322 and transformed into E. coli. Through the negative selection and colony hybridization, the transformants were obtained. The recombinant plasmids, pNEL 10 and pNES 20 were extracted from these transformants. It was known from Southern hybridization that pNEL 10 contained the 12 Mdal foreign DNA fragment hybridized with nif Q-X probe and pNES 20 included the 5 Mdal foreign DNA fragment hybridized with nif NE and nif YK probe.

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Evaluation of calving interval and selection indices in Korean native cows

  • Choi, Inchul;Lee, Dooho;Lee, Jong-Gwan;Lee, Seung-Hwan;Ryoo, Seung-Heui
    • Korean Journal of Agricultural Science
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    • v.47 no.3
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    • pp.667-672
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    • 2020
  • It is well known that intensive selection caused a decline in reproductive performance in dairy cattle. Interestingly, the reproductive performances including fertility and calving interval of Korean native beef cattle have declined in the last 20 years, suggesting that a breeding program focusing on carcass weight and intramuscular fat may affect the reproductive physiology in Korean native beef cattle, too. In this study, we analyzed the calving interval (CI) and selection index (SI) based on genome-wide association studies (GWAS) of Hanwoo cows for seven years (2013 - 2019). Multiparous cows (4.5 ± 0.11) were analyzed, which were bred by artificial insemination (AI). We first examined the distribution of the AIs and calving dates. About 40% of the AIs were carried out in May to June and October to December; subsequently, calving was observed from March to April and August to October, respectively, indicating the cows were seasonally bred. No correlation between CI and SI was found (y = 0.0459x - 17.64; R2 = 0.0356), but the ratio of cows with a positive SI was higher in the longer CI group compared to the shorter group, suggesting that the selection for meat quality and quantity may affect the reproductive performances. In addition, the average value of SI was - 3.42 in the CI < 400 while + 5.79 in the CI > 400 although the values were not statistically significant. However, our results suggest that reproductive indices such as fertility and CI should be considered for sustainability in the Hanwoo breeding selection program.

Restricted Bayesian Optimal Designs in Turning Point Problem

  • Seo, Han-Son
    • Journal of the Korean Statistical Society
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    • v.30 no.1
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    • pp.163-178
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    • 2001
  • We consider the experimental design problem of selecting values of design variables x for observation of a response y that depends on x and on model parameters $\theta$. The form of the dependence may be quite general, including all linear and nonlinear modeling situations. The goal of the design selection is to efficiently estimate functions of $\theta$. Three new criteria for selecting design points x are presented. The criteria generalized the usual Bayesian optimal design criteria to situations n which the prior distribution for $\theta$ amy be uncertain. We assume that there are several possible prior distributions,. The new criteria are applied to the nonlinear problem of designing to estimate the turning point of a quadratic equation. We give both analytic and computational results illustrating the robustness of the optimal designs based on the new criteria.

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SELECTION OF BURLEY TOBACCO FOR PADDY FIELD (버어리종 논담배용 품종 선발시험)

  • 류점호;조천준;한철수;류익상
    • Journal of the Korean Society of Tobacco Science
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    • v.6 no.2
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    • pp.179-184
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    • 1984
  • This experiment was carried out to select the suitable burley varieties for paddy field. Two varieties, two $F_1$ hybrids and three $F_1$ hybrids with pale yellow line which were all early maturing were tested in the paddy field condition. The results were as follows. 1. Va 528 and all $F_1$ hybrids flowered 4-8 days earlier than Burley 21. 2. Leaf maturity among varieties and $F_1$ hybrids were not significantly different at first priming, but significant differences were detected from second to forth primings. (MS Ky 12x JB 7802-30)Fl and (MS Br 21 x L8)$F_1$ hybrids matured 3-5 days earlier than Burley 21. Pale yellow hyorids matured early, yielded high and were favorable in physical properties, but were low in quality. 4. Va 528 and (MS Br 21 x L8) $F_1$ hybrid showed earthy maturing, high yield and good quality compared with Burley 21. So two varieties were considered suitable for paddy field cultivation.

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An Expert System for Designs of Foundations by ActiveX in Internet (인터넷상에서의 ActiveX를 이용한 기초공법선정 전문가시스템 구현)

  • 김정호;이종석
    • Proceedings of the Computational Structural Engineering Institute Conference
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    • 1999.10a
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    • pp.168-175
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    • 1999
  • The previous study was an expert system development that help engineers select proper foundation types and construction methods for structures under various subsoil condition. The system includes geographical and geological data in certain areas of Ulsan and a knowledge base for the selection of foundation types. However, the system, a kind of application program, has a weakness that it can be used only when it is installed at each user's own computer. Therefore, the purpose of the research is to more the system operated on Internet and spread over to more users. So, Server Installation, ActiveX, ADO(Active Data Objects) and ASP(Active Server Pages), which are the requirements to operate the system on Internet, are to be investigated through the research.

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The Effect of Partner Selection on the Performance of International Strategic Alliances: The Examination of Moderating Process of Previous Experience (제휴파트너 선정성향이 제휴성과에 미치는 영향에 관한 연구: 제휴경험의 조절효과를 중심으로)

  • Ahn, Sun Yub;Hyun, Jae Hoon
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.14 no.12
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    • pp.6204-6210
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    • 2013
  • This study examined adomestic firm's perspective on how their choice of partner selection criteria affects the mediating variables and the performance of international strategic alliances with particular reference to previous experience as a moderating variable. The findings of this study showed that the task-related and partner-related criteria are both positively related to trust and commitment but the results concerning the partner-related criteria repudiates the existing practices that domestic firms select foreign partners based on the partners' attributes because this weaken the commitment of the partnership. This study suggests that firms should revise their partner selection criteria, which will eventually lead to the more desirable performance of international strategic alliances.

Intra-night optical variability of AGN in COSMOS field

  • Kim, Joonho;Karouzos, Marios;Im, Myungshin;Kim, Dohyeong;Jun, Hyunsung;Lee, Joon Hyeop;Pallerola, Mar Mezcua
    • The Bulletin of The Korean Astronomical Society
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    • v.41 no.2
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    • pp.64.2-64.2
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    • 2016
  • Optical variability is one way to probe the nature of the central engine of AGN at smaller linear scales and previous studies have shown that optical variability is more prevalent at longer timescales and at shorter wavelengths. Especially, intra-night variability can be explained through the damped random walk model but small samples and inhomogeneous data have made constraining this model hard. To understand the properties and physical mechanism of optical variability, we are performing the KMTNet Active Nuclei Variability Survey (KANVaS). Test data of KMTNet in the COSMOS field was obtained over 2 separate nights during 2015, in B, V, R, and I bands. Each night was composed of 5 and 9 epochs with ~30 min cadence. To find AGN in the COSMOS field, we applied multi-wavelength selection methods. Different selection methods means we are looking different region in unification model of AGN, and 100~120, 400~500, 50~100 number of AGN are detected in X-ray, mid-infrared, and radio selection of AGN, respectively. We performed image convolution to reflect seeing fluctuation, then differential photometry between the selected AGN and nearby stars to achieve photometric uncertainty ~0.01mag. We employed one of the standard time-series analysis tools to identify variable AGN, chi-square test. Preliminarily results indicate that intra-night variability is found for X-ray selected, Type1 AGN are 23.6%, 26.4%, 21.3% and 20.7% in the B, V, R, and I band, respectively. The majority of the identified variable AGN are classified as Type 1 AGN, with only a handful of Type 2 AGN showing evidence for variability. The work done so far confirms that there are type and wavelength dependence of intra-night optical variability of AGN.

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