• 제목/요약/키워드: x-ray crystallography

검색결과 316건 처리시간 0.027초

Hydroxy-bisbenzoyloxy-allyloxycalix[4]arene의 구조 (Structure of Hydroxy-bisbenzoyloxy-allyloxycalix[4]arene)

  • 이보형;조선희;박영자
    • 한국결정학회지
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    • 제8권2호
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    • pp.111-118
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    • 1997
  • Hydroxy-bisbenzoyloxy-allyloxycalix[4]arene의 분자 및 결정구조를 X-선 회절법으로 연구하였다. 결정의 공간군은 P21이고, 단위세포 상수는 a=11.045(3), b=33.545(2), c=10.319(4) Å, β=113.86(2)˚, Z=4, V=3496.0(1.8) Å3, DC=1.28 gcm-3이다. 회절 반점들의 세기는 Enraf-Noninus CAD-4 Diffractometer로 얻었으며, Mo-Kαradiation X-선을 사용하였다. 분자구조는 직접법으로 풀었으며 최소자승법으로 정밀화하였다. 최종 신뢰도 R값은 2945개의 회절반점에 대하여 0.076이었다. 결정학적으로 서로 다른 두개의 거울상체 분자들이 라세미 혼합물 형태로 결정화되어 있다. 분자내 수소결합이 있으며 hydroxy1 pheny1고리가 크게 벗어난 flattend cone conformation을 보여주는 분자구조이다.

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투과전자현미경을 이용한 $SmZn_{0.67}Sb_2$의 3차원적 구조 분석 (Three-dimensional Structure Analysis of $SmZn_{0.67}Sb_2$ by Transmission Electron Microscopy)

  • 김진규;강성권;김완철;김윤중
    • Applied Microscopy
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    • 제34권4호
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    • pp.255-264
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    • 2004
  • 무기결정질인 $SmZn_{0.67}Sb_2$의 3차원적 구조 (공간군 P4/nmm, $a=4.26{\AA},\;c=10.37{\AA}$)를 전자결정학을 이용하여 분석하였다. 3차원적 정보를 얻기 위해서 주요 정대축인 세 방향의 고분해능 이미지의 정보와 16개의 정대축 방향의 회절도형을 조합하였다. 고분해능 이미지의 결정학적 화상처리(CIP)를 결정구조의 보다 정확한 분석을 위하여 사용하였다. 전자결정학을 이용한 분석 결과, [001], [100], [110] 방향에 대한 고분해능 이미지의 ${\Phi}_{res}$는 각각 $17.0^{\circ},\;8.3^{\circ},\;21.9^{\circ}$를 나타내었다. 전자결정학을 이용한 구조 분석 결과에 대한 정확도를 비교하기 위하여 X-ray 회절 분석을 시도하였다. $SmZn_{0.67}Sb_2$의 X-ray 구조 분석 결과, $a=4.276{\AA},\;c=10.287{\AA}$이고 신뢰도($R_{sym}$)는 4.16% 이었다.

$KD_2PO_4$의 결정구조: 중성자와 X-선 회절에 의한 연구 (Crystal Structure of $KD_2PO_4$: Neutron and X-ray Diffraction Studies)

  • 김신애;심해섭;이창희
    • 한국결정학회지
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    • 제11권3호
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    • pp.162-166
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    • 2000
  • KD₂PO₄ single crystals were grown from D₂O with reagent KH₂PO₄ and the crystal structure was determined by X-ray and neutron diffraction methods. The crystals are tetragonal at room temperature, I42d, with lattice parameters of a=7.4633(7), c=6.9785(5) Å and Z=4. Intensity data were collected on an Enraf-nonius CAD4 diffractometer with a graphite monochromated MoK/sub α/ radiation (λ=0.7107Å) and on the neutron four circle single crystal diffractometer with Ge(331) monochromated neutron beam (λ=0.997Å). The structure was refined by full-matrix least-square to final R and wR values of 0.030 and 0.072, respectively, for 204 observed reflections with I>2σ(I) by X-ray diffraction and to final R=0.041 and wR=0.096 for 144 observed relfecdtions by neutron diffraction. The O…O distance of 2.516(4)Å obtained by X-ray diffraction is the same as that of 2.515(4)Å by neutron diffraction. On the other hand, the O-D/H distance of 0.84(4)Å by X-ray diffraction is considerably shorter than 1.029(7) Åby neutron diffraction. Hydrogen and deuterium can be readily distinguished by neutrons. In this crystal 66% of H-positions were substituted by D and the rest 34% occupied by H. The phase transition temperature of DKDP obtained with deuteration levels is f193K. This value agrees fairly well with the result of DSC measurement. The nuclear density distribution by neutron diffraction provides an observation of the disordered state of D/H in KD₂PO₄ at room temperature.

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X-Ray Triple Crystal Diffraction Spectrometer의 제작과 그 응용 (X-Ray Triple Crystal Diffraction Spectrometer and Its Applications)

  • 박영한;염효영;윤형근;민석기;박용주
    • 한국결정학회지
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    • 제8권1호
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    • pp.20-25
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    • 1997
  • 고분해도의 X-선 산란을 위해 두 실험 방법이 개발됐다. 그 방법들은 (1) 2-결정 회절 스펙트로메터 (DCD)설치와 (2) 3-결정 회절 스펙트로메터 (TCD) 설치였다. Si(511)-시료(hkl)의 DCD배열로 Si(333), Si(004), GaAs(004)의 rocking curve를 그렸다. 또한 단일체 단색 평행기와 $K_{\alpha1}$ 선택기를 포함하는 Si(111)-Si(111)-Si(511)-sample(hkl)의 TCD배열로 Si(333), Si(004) 그리고 GaAs(004)의 rocking curve를 그렸다. DCD와 TCD에 의한 rocking curve의 FWHM의 차이가 논의됐다. DCD에 의한 $In_{0.037}Ga_{0.0963}As/GaAs$의 (004) 및 (115) 반사 토포그라프가 행해졌다.

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Docking Studies on Formylchromone Derivatives as Protein Tyrosine Phosphatase 1B (PTP1B) Inhibitors

  • Kim, Chan-Kyung;Lee, Kyung-A;Zhang, Hui;Cho, Hyeong-Jin;Lee, Bon-Su
    • Bulletin of the Korean Chemical Society
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    • 제28권7호
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    • pp.1141-1150
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    • 2007
  • Molecular modeling study has been performed to assist in the design of PTP1B inhibitors using FlexX. FlexX dockings with 19 test ligands, whose structures have been determined by X-ray crystallography, were successful in reproducing the experimental conformations within the protein. An increase in biological activity is observed as hydrophobic character of formylchromone derivatives increases. Most ligands bind to the activesite regions of the protein successfully in two different score runs. The Drug score run gave better results than the FlexX score run based on the score, rank, binding modes and bond distance of docked structures. Consensus values from the CScore scoring function are between 3 and 5, suggesting that the scoring scheme is reliable. All formylchromone inhibitors considered in this work show unidirectional binding modes in the active site pocket, which is contrary to the bidirectional X-ray results by Malamas et al. and amino acid residues responsible for such orientation are identified to help further development of the inhibitors.

팔라듐 촉매를 이용한 (2R)-2-(N,N-Ditosylimido)-3-butenyl methyl malonate의 거대고리화 반응 (A Macrocyclization of (2R)-2-(N,N-Ditosylimido) -3-butenyl methyl malonate by Using Palladium Catalyst)

  • 김규순;이학준
    • 대한화학회지
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    • 제44권1호
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    • pp.30-36
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    • 2000
  • A-factor,(3R)-2-(6-methylheptanoyl)-3-hydroxymethyl-4-butanolide(1)의 전합성을 위하여 선택된 중간체, (2R)-2-(N,N-ditosylimido)-3-butenyl methyl malonate(4)의 Pd(0) 촉매 커플링 반응에서 예상과는 다르게 14각 고리화합물인 bis(2-methoxycarbonyl-(4E)-hexenolide)(15)가 생성되었다. 이 화합물은 X-ray 결정학을 이용하여 구조를 확인하였다. 이 결과는 다양한 크기의 대칭적인 거대고리화합물을 합성할 수 있다는 것을 제시해 주고 있다.

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Crystal Structure Analysis of 3-(4-ethylphenyl)-3H-chromeno[4,3-c]isoxazole-3a(4H)-carbonitrile

  • Malathy, P.;Ganapathy, Jagadeesan;Srinivasan, J.;Manickam, Bakthadoss
    • 통합자연과학논문집
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    • 제8권4호
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    • pp.250-257
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    • 2015
  • The crystal structure of the potential active 3-(4-ethylphenyl)-3H-chromeno[4,3-c]isoxazole-3a(4H)-carbonitrile ($C_{19}H_{16}N_2O_2$) has been determined from single crystal X-ray diffraction data. In the title compound crystallizes in the monoclinic space group $P2_1/c$ with unit cell dimension a=6.6869 (8) ${\AA}$, b=15.8326 (19) ${\AA}$ and c= 15.237 (2) ${\AA}$ [${\alpha}=90^{\circ}$, ${\beta}=100.663^{\circ}$ and ${\gamma}=90^{\circ}$]. In the structure chromene, isoxazole and carboxylate are almost coplanar each other. All geometrical parameters revelled that chromene ring of pyran ring adopt sofa conformation. The crystal packing is stabilized by intermolecular C-H...N and C-H...O hydrogen bond interaction.

$[Ph_3P(OH)]^+[ $N_3$^-$의 분리 및 구조 (Isolation and Structure of $[Ph_3P(OH)]^+[ $N_3$]^-$)

  • Beom Jun Lee;Won Seok Han;Soon Won Lee
    • 한국결정학회지
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    • 제12권3호
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    • pp.141-144
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    • 2001
  • Na[Ga(N₃)₄]와 PPh₃의 반응으로부터 이온성 화합물 [Ph₃P(OH)]/sup +/[N₃]/sup -/ (1)이 분리되었다. 화합물1의 구조가 분광학적 방법(¹H-NMR, /sup 13/C{¹H-NMR, IR) 및 X-ray 회절법으로 규명되었다. 화합물1의 결정학 자료 : 사방정계 공간군 P2₁2₁2₁, a = 10.491(4)Å, b=11.603(5)Å, c=13.149(5)Å, Z=4, R(wR₂)=0.0547(0.0978).

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Bis(morpholine)-substituted 1,3,5-Triazines Derivatives: Synthesis and Structural Study

  • Lee, Jong-Dae
    • 통합자연과학논문집
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    • 제11권2호
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    • pp.61-68
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    • 2018
  • New 4,4'-[6-(o-carboranylalkoxy)-1,3,5-triazine-2,4-diyl]dimorpholine derivatives have been prepared by reacting 4,4'-[6-(alkynyloxy)-1,3,5-triazine-2,4-diyl]dimorpholines with decaborane and N,N-dimethylaniline as base. The intermediate compounds, 4,4'-[6-(alkynyloxy)-1,3,5-triazine-2,4-diyl]dimorpholines, have been prepared by reacting 4,4'-[6-chloro-1,3,5-triazine-2,4-diyl]dimorpholines with prop-2-yn-1-ol, but-3-yn-1-ol, and pet-4-yn-1-ol, and potassium tert-butoxide (t-BuOK) as base. The structure of these compounds has been confirmed by IR, $^1H$, $^{11}B$, and $^{13}C$ NMR and X-ray crystallographic studies.