• 제목/요약/키워드: wild type

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에리스리톨 고생산성 변이주인 Moniliella suaveolens var. nigra의 선별과 배양특성 (Selection and Characterization of a High Erythritol Producing Mutant of Moniliella suaveolens var. nigra)

  • 박홍우;이금숙
    • KSBB Journal
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    • 제17권3호
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    • pp.290-294
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    • 2002
  • 경제적으로 에리스리톨을 대량 생산하기 위해 Moniliella suaveolens var. nigra의 wild type을 mutation시켜 변이주를 선별하였다. 선별된 변이주는 400 g/L 포도당배지 플라스크 배양에서 에리스리톨 172 g/L, 글리세롤 20 g/L를 생산하였는데 wild-type의 배양결과와 비교하면 에리스리롤의 생산성은 비슷하고 부산물인 글리세롤의 생성은 50% 적다. 변이주는 wild type 배양시 발생하는 다량의 foam을 적게 발생시킴이 관찰되었다. 배양기 5 L 배양에서 변이주는 에리스리톨의 생산과 부산물 글리세롤의 생성이 wild-type의 것들과 비슷하였다. 이의 원인은 아직 규명되지 않았으나 배양 중 부적절한 산소전달이나 배양 중 발생하는 거품에 세포가 응집하였기 때문인 것으로 추측된다. 균주의 대사를 조사한 결과, 글리세롤은 에리스리톨로 변환되나 에리스리톨은 글리세롤로 변환되지 않음이 관찰되었다. 새로운 고생산성 Moniliella 변이주는 분리.정제 비용이 절감된 순도 놀은 에리스리톨 생성을 가능 하게 할 것이다.

Cyclodextrin Glucanotransferase를 이용한 아밀로펙틴 클러스터의 생산 (Enzymatic Production of Amylopectin Cluster Using Cyclodextrin Glucanotransferase)

  • 이혜원;전혜연;최혜정;심재훈
    • 한국식품영양과학회지
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    • 제43권9호
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    • pp.1388-1393
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    • 2014
  • 선행연구에서 얻은 alkalophilic Bacillus I-5 유래의 CGTase wild-type과 가수분해능이 강화된 mutant 효소를 활용하여 waxy rice starch로부터 아밀로펙틴 클러스터를 제조하였다. SEC-MALLS-RI 분석법으로 CGTase wild-type과 mutant 효소가 처리된 시료의 평균 분자량을 확인한 결과 10분가량의 효소반응으로 두 반응 모두 평균 분자량은 $10^4{\sim}10^5Da$으로 급격히 감소하였음을 확인하였으며, 일정 반응 시간이 경과한 이후에는 더 이상 분자량의 감소가 일어나지 않음으로 미루어 시료가 아밀로펙틴 클러스터 단위로 분해되었으며 그 분자량은 $10^4{\sim}10^5Da$ 정도임을 알 수 있다. 또한 MALDI-TOF/MS 분석을 통하여 CGTase wild-type은 다양한 종류의 cyclic 형태의 maltodextrin을 생성하고 있으며 mutant 효소는 주로 소량의 maltooligosaccharide 들을 생산함을 확인하였다.

Germinal Center-independent Affinity Maturation in Tumor Necrosis Factor Receptor 1-deficient Mice

  • Kim, Jin-Ho;Kim, Ju;Jang, Yong-Suk;Chung, Gook-Hyun
    • BMB Reports
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    • 제39권5호
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    • pp.586-594
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    • 2006
  • Germinal centers (GCs) have been identified as site at which the somatic mutation of immunoglobulins occurs. However, somatic mutations in immunoglobulins have also been observed in animals that normally do not harbor germinal centers. This clearly indicates that somatic mutations can occur in the absence of germinal centers. We therefore attempted to determine whether or not GCs exist in TNFR1-deficient mice, and are essential for the somatic mutation of immunoglobulins, using (4-hydroxy-3-nitropheny)acetyl-ovalbumin (NP-OVA). Both wild-type and TNFR1-deficient mice were immunized with NPOVA, and then examined with regard to the existence of GCs. No typical B-cell follicles were detected in the TNFR1-deficient mice. Cell proliferation was detected throughout all splenic tissue types, and no in vivo immune-complex retention was observed in the TNFR1-deficient mice. All of these data strongly suggest that no GCs were formed in the TNFR1-deficient mice. Although TNFR1-deficient mice are unable to form GCs, serological analyses indicated that affinity maturation had been achieved in both the wild-type and TNFR1-deficient mice. We therefore isolated and sequenced several DNA clones from wild-type and the TNFR1-deficient mice. Eight out of 12 wild-type clones, and 11 out of 14 clones of the TNFR-1-deficient mice contained mutations at the CDR1 site. Thus, the wild-type and TNFR1-deficient mice were not extremely different with regard to types and rates of somatic mutation. Also, high-affinity antibodies were detected in both types of mice. Collectively, our data appear to show that affinity maturation may occur in TNFR1-deficient mice, which completely lack GCs.

Effect of a PMR1 Disruption on the Processing of Heterologous Glycoproteins Secreted in the Yeast Saccharomyces cerevisiae

  • Kim, Moo-Woong;Ko, Su-Min;Kim, Jeong-Yoon;Sohn, Jung-Hoon;Park, Eui-Sung;Kang, Hyun-Ah;Rhee, Sang-Ki
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제5권4호
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    • pp.234-241
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    • 2000
  • The Saccharomyces cerevisiae PMR1 gene encodes a Ca2+-ATPase localized in the Golgi. We have investigated the effects of PMR1 disruption in S. cerevisiae on the glycosylation and secretion of three heterologous glycoproteins, human ${\alpha}$1-antitrypsin (${\alpha}$1-AT), human antithrombin III (ATHIII), and Aspergillus niger glucose oxidase (GOD). The pmr1 null mutant strain secreted larger amounts of ATHIII and GOD proteins per a unit cell mass than the wild type strain. Despite a lower growth rate of the pmr1 mutant, two-fold higher level of human ATHIII was detected in the culture supernatant from the pmr1 mutant compared to that of the wild-type strain. The pmr1 mutant strain secreted ${\alpha}$1-AT and the GOD proteins mostly as core-glycosylated forms, in contrast to the hyperglycosylated proteins secreted in the wild-type strain. Furthermore, the core-glycosylated forms secreted in the pmr1 mutant migrated slightly faster on SDS-PAGE than those secreted in the mnn9 deletion mutant and the wild type strains. Analysis of the recombinant GOD with anti-${\alpha}$1,3-mannose antibody revealed that GOD secreted in the pmr1 mutant did not have terminal ${\alpha}$1,3-linked mannose unlike those secreted in the mnn9 mutant and the wild type strains. The present results indicate that the pmr1 mutant, with the super-secretion phenotype, is useful as a host system to produce recombinant glycoproteins lacking high-mannose outer chains.

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Protective effect of p53 in vascular smooth muscle cells against nitric oxide-induced apoptosis is mediated by up-regulation of heme oxygenase-2

  • Kim, Young-Myeong;Choi, Byung-Min;Kim, Yong-Seok;Kwon, Young-Guen;Kibbe, Melina R.;Billiar, Timothy R.;Tzeng, Edith
    • BMB Reports
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    • 제41권2호
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    • pp.164-169
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    • 2008
  • The tumor suppressor gene p53 regulates apoptotic cell death and the cell cycle. In this study, we investigated the role of p53 in nitric oxide (NO)-induced apoptosis in vascular smooth muscle cells (VSMCs). We found that the NO donor S-nitroso-N-acetyl-penicillamine (SNAP) increased apoptotic cell death in p53-deficient VSMCs compared with wild-type cells. The heme oxygen-ase (HO) inhibitor tin protoporphyrin IX reduced the resistance of wild-type VSMCs to SNAP-induced cell death. SNAP promoted HO-1 expression in both cell types. HO-2 protein was increased only in wild-type VSMCs following SNAP treatment; however, similar levels of HO-2 mRNA were detected in both cell types. SNAP significantly increased the levels of non-heme-iron and dinitrosyl iron-sulfur clusters in wild-type VSMCs compared with p53-deficient VSMCs. Moreover, pretreatment with FeSO4 and the carbon monoxide donor CORM-2, but not biliverdin, significantly protected p53-deficient cells from SNAP-induced cell death compared with normal cells. These results suggest that wild-type VSMCs are more resistant to NO-mediated apoptosis than p53-deficient VSMCs through p53-dependent up-regulation of HO-2.

노루궁뎅이버섯 야생 수집균주의 배양적 특성과 항산화 활성 (Cultural characteristics and antioxidant activity of wild-type collections of Hericium erinaceus)

  • 박순애;김선주;김하람;강희완
    • 한국버섯학회지
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    • 제16권1호
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    • pp.9-15
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    • 2018
  • 노루궁뎅이버섯의 국내 야생수집 18 균주와 재배종 '노루1호', '노루2호' 품종의 PDA배지에서 균사체 배양적 특성은 갈색색소생산, 기중균사형, 분지균사형으로 분류되었으며 KFRI 509, KFRI 1091, KFRI 1093, KFRI 1623의 균사생장율이 '노루1호', '노루2호'보다 20% 이상 높았다. Ethanol 60%추출물이 페놀함량과 DPPH와 ABTS 라디칼 소거능이 농도 의존적으로 가장 높았다. 노루궁뎅이버섯 수집 균주의 항산화활성은 KFRI 507, KFRI 508, KFRI 842, KFRI 1623균주가 재배종 '노루1호', '노루2호'와 비교하여 DPPH라디칼 소거능은 농도 의존적으로 10%에서 40% 이상 높았으며 ABTS라디칼 소거능은 추출물 0.125 mg/ml를 기준으로 '노루1호', '노루2호'보다 30%에서 60% 이상 높은 활성을 보였다.

Functional Abnormalities of HERG Mutations in Long QT Syndrome 2 (LQT2)

  • Hiraoka, Masayasu
    • The Korean Journal of Physiology and Pharmacology
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    • 제5권5호
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    • pp.367-371
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    • 2001
  • The chromosome 7-linked long QT syndrome (LQT2) is caused by mutations in the human ether-a- go-go-related gene (HERG) that encodes the rapidly activating delayed rectifier $K^+$ current, $I_{Kr},$ in cardiac myocytes. Different types of mutations have been identified in various locations of HERG channel. One of the mechanisms for the loss of normal channel function is due to membrane trafficking of channel protein. The decreased channel function in some deletion mutants appears to be due to loss of coupling with wild type HERG to form the functional channel as the tetramer. Most of missense mutants with few exceptions could interact with wild type HERG to form functional tetramer and caused dominant negative suppression with co-injection with wild type HERG showing variable effects on current amplitude, voltage dependence, and kinetics of activation and inactivation. Two missense mutants at pore regions of HERG found in Japanese LQT2 (A614V and V630L) showed accentuated inward rectification due to a negative shift in steady-state inactivation and fast inactivation. One mutation in S4 region (R534C) produced a negative shift in current activation, indicating the S4 serving as the voltage sensor and accelerated deactivation. The C-terminus mutation, S818L, could not express the current by mutant alone and did not show dominant negative suppression with co-injection of equal amount of wild type cRNA. Co-injection of excess amount of mutant with wild type produced dominant negative suppression with a shift in voltage dependent activation. Therefore, multiple mechanisms are involved in different mutations and functional abnormality in LQT2. Further characterization with the interactions between various mutants in HERG and the regulatory subunits of the channels (MiRP1 and minK) is to be clarified.

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Vibrio parahaemolyticus collagenase 불활성화 돌연변이체의 제조 및 특성 (Construction and Characterization of the Vibrio parahaemolyticus Collagenase Inactivated Mutant)

  • 이재원;전인준;강호영;차재호
    • 생명과학회지
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    • 제14권2호
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    • pp.362-367
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    • 2004
  • 장염비브리오균의 숙주 내 감염을 일으키는 기작을 이해하기 위하여 세포외 효소 중의 하나인 콜라겐분해효소의 유전자가 불활성화된 돌연변이체를 제작하였다. 콜라겐분해효소의 유전자인 vppC 유전자에 항생제 내성 유전자인 nptII를 삽입하여 제작된 재조합 DNA를 suicide vector인 pDMS197에 클로닝하여 pVCM03이라 명명하였다. 재조합 suicide 플라스미드 pVCM03을 E. coli 7213에 형질전환하여 접합을 통하여 원 균주인 V. varahaemolyticus 04에 전달하였다. 전달된 pVCM03 유래의 재조합 vvpC::npfII DNA는 homologous recombination에 의해 wild-type allele와 교환되어 돌연변이체를 형성하게 되고, 돌연변이체는 10% sucrose가 함유된 TCBS 배지에서 선별되었다. Allele exchange는 PCR에 의한 증폭된 DNA의 크기 비교로 확인하였다. 돌연변이체인 V. parahaemolyticus CM은 원 균주와 비교하였을 때 약 4배정도 낮은 콜라겐 분해 활성을 나타내었고, vero cell을 이용한 MTT assay에서도 원 균주에 비하여 낮은 세포독성을 보였다.

$\lambdaP_{R}$ 프로모터 열린복합체 형성에 미치는 DNA melting 부위 염기서열의 영향 (Effect of sequence variations within DNA melting region on the rate of formation of open complexes at $\lambdaP_{R}$ promoter)

  • 정현채;노정혜
    • 미생물학회지
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    • 제28권1호
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    • pp.19-26
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    • 1990
  • To examine the effects of sequence variations near the transcriptional start site on the rate of formation of the open complexes at bacteriophage $\lambda P_{R}$ promoter, two mutant promoters were created by site-specific mutagenesis using synthetic oligonucleotides. Mutant I coatains changes at positions -3 and -4 from TT to CC, thus having a 6-bp long G/C stretch between -10 region and transciptional start site (+1). Mutant II has changes at positions -5 and -6 from GG to AA, thereby having a 9-bp long A/T stretch between positions -11 and -3. Selective filter binding assays were performed to measure the rate of formation of the open complexes between the wild-type or two mutant $P_{R}$ promoters on 664 bp fragments and E. coli RNA polymerase at two temperatures. At 37.deg.C, the wild-type and two mutants showed similar rates for the formation of open complex. The second order rate constant $k_{a}$ and $\tau _{int}$, as determined from the .tau.-plot analysis, were $(6.0\pm0.4)\times10^{6}M^{-1}sec^{-1}$ and $11\pm5$sec, respectively. At 18.deg.C, however, the wild-type and two mutant promoters showed differences in the kinetic parameters. k for the wild-type promoter was (2.2$\pm$0.1)\times 10^{6}M^{-1}sec^{-1}$ and $\tau _{int}$ was 76$\pm$sec. Mutant I and II exhibited differences mainly in the rate of isomerization ($\tau_{int,I}=91\pm$10 sec, int,II=34$\pm$ sec), whereas the second order rate constant $k_{a}$ was similar to the wild type value. This result implies that at $18^{\circ}C$, the isomerization rate is determined by both protein conformational change and DNA melting, which are separable kinetically according to the 3-step mechanism of Roe et al.(1984,1985), and that the base changes affected mainly the rate of DNA melting as predicted.lting as predicted.

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Trichoderma reesei QM 9414의 섬유소 분해 호소 생산을 위한 조절변이주의 분리 및 특성에 관한 연구 (Isolation and Characterization of Regulatory Mutant for Cellulase Production from Trichoderma reesei QM 9414)

  • 최건호;구윤모;소재성
    • 한국균학회지
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    • 제26권1호통권84호
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    • pp.127-133
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    • 1998
  • Trichoderma reesei QM 9414를 N-methyl-N'-nitro-N-nitrosoguanidine으로 처리하여 얻은 돌연변이주들을 여러 탄소원에서 배양했을 때 carboxymethylcellulose(CMC), fiter paper 등의 기질에 대한 활성측정결과 다음과 같은 결과를 얻었다. 모균주가 catabolite repression을 받는 반면에 돌연변이주들의 cellulase 활성은 glucose를 탄소원으로 사용한 배지에서 모균주에 비해 CMCase 8.4배, FPase가 $5.4{\sim}5.7$배 증가함으로써 glucose-derepression성질을 갖는 돌연변이주들을 얻었으며 glucose를 탄소원으로 사용하고 lactose로 효소의 생산을 유도시켜본 결과 모균주에 비해 효소의 생산에 안정성을 갖는 것으로 나타났으며 돌연변이주 1이 상대적으로 더 우수한 돌연변이주로 나타났다. 돌연변이주들에 의해 생산된 효소는 모균주와 마찬가지로 pH 4.8, $60^{\circ}C$에서 최적활성을 나타내었다.

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