• Title/Summary/Keyword: virus control

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Phylogenetic Analysis of Viral Haemorrhagic Septicaemia Virus (VHSV) Isolates from Asia (아시아에서 분리된 viral haemorrhagic septicaemia virus (VHSV) isolates의 계통분석학적 비교)

  • Ahn, Sang Jung;Cho, Mi Young;Jee, Bo-Young;Park, Myoung Ae
    • Journal of fish pathology
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    • v.26 no.3
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    • pp.149-161
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    • 2013
  • Viral haemorrhagic septicaemia virus (VHSV), the causative agent of viral haemorrhagic septicaemia (VHS), is an epidemic virus of cultured olive flounder Paralichthys olivaceus in Korea. In the present study, the entire glycoprotein (G) gene including several hypervariable regions from 36 isolates of diverse geographic and host origin and 8 Korean VHSV isolates from cultured olive flounder were analyzed. Phylogenetic analysis indicated that most of Asian VHSV belong to the genotype IVa group, suggesting that they originated from a common ancestral virus. Comparative sequence analysis of the complete G protein from Korean VHSV isolates revealed 3 Korean strain-specific nucleotide residues (nucleotide number of G-region: A755, T834 and T1221). These results suggest that Korean VHSV originated from a common ancestor, but these regional specific nucleotide sequences suggest that genetic differences of VHSV are more related to geographic areas than to host fish species.

Quantitative analysis of viral hemorrhagic septicemia virus in tissues of infected olive flounder(Paralichthys olivaceus) (바이러스성 출혈성 패혈증 바이러스(Viral Hemorrhagic Septicemia Virus) 감염 넙치(Paralichthys olivaceus)의 조직별 바이러스 정량분석)

  • Jang, Jin Hyeon;Hwang, Seong Don;Jung, Ji Min;Kwon, Mun-Gyoung;Hwang, Jee Youn
    • Korean Journal of Environmental Biology
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    • v.39 no.3
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    • pp.259-265
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    • 2021
  • A diagnostic test for viral hemorrhagic septicemia virus (VHSV), which infects more than 80 species of freshwater and marine fish at home and abroad, causing mass mortality, was conducted to provide quantitative data on the amount of virus expression in various tissues of flounder in chronological order. The tissues were collected in chronological order after the intraperitoneal injection of 3.0E+07 tissue culture infective dose50 (TCID50) per 0.1mL per fish of VHSV to randomly selected flounder. As a result of relative quantification through real-time PCR, the highest levels of virus expression were found in the spleen, kidney, gill, and liver on day 5. This study proved that the spleen was an appropriate site for the final diagnosis of VHSV in the early stages of infection and will provide important information for the diagnosis of legal infectious diseases in Korea.

The development of Inspection Machine for a blood virus infection (바이러스 감염 판별용 혈액 검사기 개발)

  • Jun, Jae-Min;Seo, Kyu-Tae;Lee, Bo-Hee;Lee, In-Koo;Min, Seung-Ki;Kim, Hak-Jun
    • Proceedings of the KIEE Conference
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    • 2004.11c
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    • pp.465-467
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    • 2004
  • This paper deals with the design and analysis of automatic virus infection machine, which can be used in blood testing at veterinary hospital. It consists of the mechanical positioning parts and electrical control parts. Two of driving motor and ball screws are used to move the liquid container into the test position and mix the blood on litmus paper. In addition, a thermal controller is installed to keep the container temperature on constant level. The user interface using with a LCD and some keys are supplied with a 8-bit single chip controller. All of the designs issue related with the mechanism and controllers are discussed in detail. Finally the proposed machine is tested in real experiment with the formal processing to judge the virus infection, and also the usefulness of designed algorithm is verified through the experiments.

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Development of a PCR Diagnostic System for Iris yellow spot tospovirus in Quarantine

  • Shin, Yong-Gil;Rho, Jae-Young
    • The Plant Pathology Journal
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    • v.30 no.4
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    • pp.440-444
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    • 2014
  • Iris yellow spot virus (IYSV) is a plant pathogenic virus which has been reported to continuously occur in onion bulbs, allium field crops, seed crops, lisianthus, and irises. In South Korea, IYSV is a "controlled" virus that has not been reported, and inspection is performed when crops of the genus Iris are imported into South Korea. In this study, reverse-transcription polymerase chain reaction (RT-PCR) and nested PCR inspection methods, which can detect IYSV, from imported crops of the genus Iris at quarantine sites, were developed. In addition, a modified positive plasmid, which can be used as a positive control during inspection, was developed. This modified plasmid can facilitate a more accurate inspection by enabling the examination of a laboratory contamination in an inspection system. The inspection methods that were developed in this study are expected to contribute, through the prompt and accurate inspection of IYSV at quarantine sites to the plant quarantine in South Korea.

Newcastle disease virus: the past and current situation in Indonesia

  • NLP Indi Dharmayanti;Diana Nurjanah;Harimurti Nuradji;Teguh Suyatno;Risa Indriani
    • Journal of Veterinary Science
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    • v.25 no.1
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    • pp.3.1-3.20
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    • 2024
  • The Newcastle disease virus (NDV) outbreak was first reported in Java Island, Indonesia, in 1926, which was then reported further in Newcastle-upon-Tyne, England. Nevertheless, the NDV is still endemic in Indonesia, with outbreaks occurring in free-range and commercial chicken farms. The dynamic evolution of the NDV has led to the further development of vaccines and diagnostic tools for more effective control of this virus. This paper discusses the history of the NDV occurrence, vaccines, the development of diagnostic tools, and the epidemiological condition of the NDV in Indonesia. Indonesia, which has the largest poultry population in the world after China, has challenges in preventing and controlling this virus that causes economic losses to the farmers and has an impact on the welfare of the poultry farming community in Indonesia.

Comparison of Recombinant Baculovirus Vector Systems and Control Vector System (재조합 베큘로바이러스벡터와 대조 벡터의 비교)

  • Kim, Ji-Young;Hong, Seong-Karp
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2015.05a
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    • pp.954-957
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    • 2015
  • A recombinant baculovirus vector systems were composed of genes of polyhedron promoter, vesicular stomatitis virus G (VSVG), polyA, cytomegalovirus (CMV) promoter, enhanced green fluorescent protein (EGFP), and protein transduction domain (PTD). These recombinant baculovirus vector system were transfected into various cell lines and tissues and confirmed gene transfer and expression of these vector systems with only control vector system. From the result, gene transfer and gene expression of recombinant baculovirus vector systems were superior in terms of efficacy and safety than in the control vector system.

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Biological Control of n Severe Viral Strain Using a Benign Viral Satellite RNA Associated with Cucumber mosaic virus

  • Montasser Magdy Shaban;Bader Al-Hamar;Bhardwai Radhika Guleri
    • The Plant Pathology Journal
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    • v.22 no.2
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    • pp.131-138
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    • 2006
  • Two strains of Cucumber mosaic virus (CMV) isolated in Kuwait were confirmed their infectivity based on symptomatology and host range on different cultivars of tomato (Lycopersicon esculentum), tobacco(Nicotiana tabacum L.) and squash (Cucurbita pepo). The pattern of symptoms differed for the two CMV strains in tomato and tobacco, showing severe stunting and mosaic symptoms with one strain designated KU2, and almost symptomless with the other strain designated KU1. A satellite RNA 5 (sat-RNA) was found to be associated with the KU1 strain and was characterized as a benign viral satellite RNA. Using reverse transcription and polymerase chain reaction (RT-PCR) with sat-RNA specific primers, an amplified PCR product of about 160bp was determined and analyzed by gel electrophoresis. This naturally occurring benign viral satellite RNA was successfully used as a biological control agent to protect tomato plants against the severe KU2 strain. Tomato plants grown in plant-growth chambers, were preinoculated with KU1 containing the benign viral satellite and then challenge inoculated with the severe KU2 strain at different time intervals. All plants challenged three weeks after preinoculation showed nearly complete protection from subsequent infection by the severe strain. This biological control technology using plant viruses was found protective and could be successfully established sooner after the preinoculation.

Design of Fuzzy Controller Using Parasitic Co-evolutionary Algorithm (기생적 공진화 알고리즘을 이용한 퍼지 제어기 설계)

  • 심귀보;변광섭
    • Journal of Institute of Control, Robotics and Systems
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    • v.10 no.11
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    • pp.1071-1076
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    • 2004
  • It is a fuzzy controller that it is the most used method in the control of non-linear system. The most important part in the fuzzy controller is a design of fuzzy rules. Many algorithm that design fuzzy rules have proposed. And attention to the evolutionary computation is increasing in the recent days. Among them, the co-evolutionary algorithm is used in the design of optimal fuzzy rule. This paper takes advantage of a schema co-evolutionary algorithm. In order to verify the efficiency of the schema co-evolutionary algorithm, a fuzzy controller for the mobile robot control is designed by the schema co-evolutionary algorithm and it is compared with other parasitic co-evolutionary algorithm such as a virus-evolutionary genetic algorithm and a co-evolutionary method of Handa.

Incidence and Distribution of Virus Diseases on Paprika (Capsicum annuum var. grossum) in Jeonnam Province of Korea

  • Ryu, Jae-Gee;Ko, Sug-Ju;Lee, Yong-Hwan;Kim, Mi-Kyeong;Kim, Kook-Hyung;Kim, Heung-Tae;Choi, Hong-Soo
    • The Plant Pathology Journal
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    • v.25 no.1
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    • pp.95-98
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    • 2009
  • The incidence and occurrence of virus infecting paprika (Capsicum annuum var. grossum) in Jeonnam province, the main areas of cultivation in Korea is undetermined. In this study, a total of 1,020 samples with virus-like symptoms were collected in Jeonnam province during summer season for 3 consecutive years (2002-2005) and were tested using enzyme linked immunosorbent assay (ELISA). Results showed that Pepper mottle virus (PepMoV), Broad bean wilt virus (BBWV), and Cucumber mosaic virus (CMV) were found to be the most prevalent viruses with a 3-year average percent incidence of 41.3, 19.8, and 4.4 respectively. Mixed infection with more than two viruses was also found with 3.5%, 17.0%, and 8.3%, respectively. Symptoms of these virus diseases were not evident at the seedling stage but slowly appeared at the transplanting stage and increased to the middle stage (4-5 months after transplanting) during the 3-year cultivation periods. Symptom appearance of infected plants however varied largely with transplanting time. Those plants transplanted from November to January were found to be infected with viruses in June, whereas symptoms appeared with in a month those plants transplanted from June to August. There were differences in the virus incidence from primary factor such as district, type of green house and variety, but these were not statistically significant (data not shown). Recommended control measures of paprika against these viruses is also discussed in this paper.

Three Different Viruses Isolated from Typical Weed Plants that Grown Adjacent to Common Crop Fields

  • Kwon, Sun-Jung;Choi, Hong-Soo;Han, Jung-Heon;La, Yong-Joon;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • v.16 no.6
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    • pp.297-305
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    • 2000
  • Weeds are widely grown in the field and are infected by many viruses. A survey was conducted to identify viruses infecting weeds in Korea. Virus-infected weed samples including Rorippa indica (L.) Hiern, R. islandica (Oed.) Bord, Crepidiastrum denticulatum (Houtt.) Pak & Kawanno, Achyranthes japonica (Miq.) Nakai, and Chrysanthemum boreale (Makino) Makino were collected in Kyonggi Province. These weeds were grown in the greenhouse and were isolated on 10 test plants. Several virus isolates were isolated fron infected tissues and were further studied by host range assay, serological test, electron microscopy (EM), reverse transcription-polymerase chain reaction (RT-PCR) and sequencing. Each isolated virus strain was mechanically transmitted to weeds and various hosts including Nicotiana spp., Brassica spp., Vigna unguiculata, Capsicum annuum, and Cucumis sativus and showed systemic mosaic, vein clearing, necrosis, mottle, malformation, chlorosis, and/or death of host plants in some cases. Each virus was then purified using infected leaves and observed by EM. From these results three viruses were isolated and identified as Turnip mosaic virus (TuMV), Broad bean wilt virus (BBWV), and Cucumber mosaic virus (CMV). RT-PCR using virus-specific oligonucleotide primers and the cloning were conducted to determine the nucleotide sequences of coat proteins of the three viruses their amino acid sequence were deduced. The amino acid sequence homologies were about 92.7 to 99.7%, 96.2 to 97.7%, and 93.9 to 98.6% to other reported TuMV, BBWV, and CMV strains, respectively. These results suggest that many weeds may serve as primary inoculum source of diseases caused by TuMV, BBWV, CMV and that the management of these viral diseases can be achieved through weed control.

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