• Title/Summary/Keyword: unrecorded Species

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A report of 20 unrecorded bacterial species isolated from island and coastal ecosystems in 2023

  • Da Som Kim;Seung Yeol Shin;Heeyoung Kang;Jae Ho Song;Song-Ih Han
    • Journal of Species Research
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    • v.13 no.3
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    • pp.310-317
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    • 2024
  • Various samples from island and coastal ecosystems in South Korea were investigated to discover unrecorded bacterial species. Soils from these areas, along with seawater samples, were plated on marine agar and R2A agar (containing 3% sea salt). From these samples, approximately 1,070 bacterial strains were isolated as single colonies and identified using 16S rRNA gene sequences. A total of 20 strains, which exhibited at least 98.7% similarity in their 16S rRNA gene sequences to those of validly published bacterial species not yet reported in Korea, were identified as unrecorded bacterial species. These strains belonged to three phyla, six classes, 10 orders, 14 families, and 16 genera. These were assigned as follows: Thioclava, Breoghania, Acidovorax, Erythrobacter, Paracoccus, Jiella, Aurantimonas, and Qipengyuania within the class Alphaproteobacteria; Pseudomonas, Cobetia, and Rheinheimera within the class Gammaproteobacteria; Aequorivita, Leeuwenhoekiella, and Polaribacter within the class Flavobacteriia; Algoriphagus within the class Cytophagia; and Microbacterium within the class Actinobacteria. The unreported species underwent further taxonomic characterization, which included assessments of Gram reaction, colony and cell morphology, biochemical and phylogenetic characteristics.

New Records of Dinoflagellates in Five Genera of Peridiniales (Dinophyceae) from Korean Waters

  • Lee, Joon-Baek;Kang, Su-Min
    • Korean Journal of Environmental Biology
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    • v.35 no.3
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    • pp.251-264
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    • 2017
  • A study searching for unrecorded and taxonomically undescribed indigenous species has been conducted since 2006. Samples were collected from many sites in coastal waters and offshore in Korea as well as around Jeju Island. Since 2008 we have found 13 unrecorded species belonging to family Diplopsaliaceae, Heterocapsaceae, Kolkwitziellaceae, Protoperidiniaceae and Thoracosphaeraceae. The species are as follows, Preperidinium meunieri (2014), Heterocapsa ovata (2015), H. pseudotriquetra (2015), Diplopsalis lenticula (2008), Protoperidinium abei (2009), P. diabolus var. longipes (2010), P. depressum (synonym: P. parallelum (2008)), P. latispinum (2016), P. punctulatum (2010), P. solidicorne (synonym: P. spinosum (2010)), P. subpyriforme (2010), P. pacificum (2013), Scrippsiella hexapraecingula (2009) (note; The numbers in parenthesis refer to the year that the species was reported as unrecorded indigenous species by National Institute of Biological Resources, NIBR hereafter). Among these, 5 species were described as newly recorded species in Korean waters, and 8 were re-described in this study.

Four Unrecorded Aspergillus Species from the Rhizosphere Soil in South Korea

  • Lee, Jun Won;Kim, Sung Hyun;You, Young-Hyun;Lim, Young Woon;Park, Myung Soo
    • Mycobiology
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    • v.49 no.4
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    • pp.346-354
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    • 2021
  • The genus Aspergillus is commonly isolated from various marine and terrestrial environments; however, only a few species have been studied in rhizosphere soil. As part of the Korean indigenous fungal excavation project, we investigated fungal diversity from rhizosphere soil, focusing on Aspergillus species. A total of 13 strains were isolated from the rhizosphere soil of three different plants. Based on phylogenetic analysis of β-tubulin and calmodulin and morphological characteristics, we identified five Aspergillus species. A. calidoustus and A. pseudodeflectus were commonly isolated from the rhizosphere soil. Four species were confirmed as unrecorded species in Korea: A. calidoustus, A. dimorphicus, A. germanicus, and A. pseudodeflecuts. The detailed morphological descriptions of these unrecorded species are provided.

Isolation and characterization of unrecorded yeast species from Korea in the families Debaryomycetaceae and Piskurozymaceae

  • Lee, Sang Eun;Oh, Hye Jin;Kim, Myung Kyum
    • Journal of Species Research
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    • v.10 no.4
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    • pp.344-349
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    • 2021
  • The purpose of this study was to isolate and identify wild yeasts from soil of Gyeongju city, and Haemadipsa rjukjuana of Gageodo Island, characterizing unrecorded yeast strains from Korea. The molecular analysis of the D1/D2 domain of 26S rDNA of yeast was performed using the Basic Local Alignment Search Tool (BLAST). No official report exists describing these three species: one species in the genus Candida, one species in the genus Debaryomyces, and one species in the genus Solicoccozyma. Candida saitoana YL9, Debaryomyces fabryi YL1, and Solicoccozyma terrea 20g9-1 are recorded for the first time from Korea. All three strains were oval shaped and polar binding, while positive for glucose, ᴅ-xylose, and ᴅ-cellobiose. Morphological, physiological, and biochemical properties are described in the species descriptions.

Four Unrecorded Species of Crabs from the Island Quelpart (제주도산 '게'류중 4 미기록종에 관하여)

  • 김훈주
    • The Korean Journal of Zoology
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    • v.1 no.1
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    • pp.9-16
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    • 1958
  • In this paper the author reports on 4 species of crabs qhich were collected during August 20th-26th 1957 in the Island Quelpart. Among them Philyra kanckoi Sakai, Charybdis japonica A. Milne Edwards, Macrophthalmus dilatatus de Haan are unrecorded species on the Island Quelpart and phynchoplax messor Stimpson is unrecored one in Korea.

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Report of 39 unrecorded bacterial species in Korea belonging to Gammaproteobacteria

  • Kim, Min-Kyeong;Park, Jisun;Yun, Bo-Ram;Bae, Jin-Woo;Cha, Chang-Jun;Cho, Jang-Cheon;Im, Wan-Taek;Jahng, Kwang Yeop;Jeon, Che Ok;Joh, Kiseong;Kim, Wonyong;Lee, Soon Dong;Seong, Chi Nam;Yi, Hana;Kim, Seung-Bum
    • Journal of Species Research
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    • v.7 no.1
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    • pp.24-35
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    • 2018
  • During a series of extensive surveys of prokaryotic species diversity in Korea, bacterial strains belonging to Gammaproteobacteria were isolated from various sources of aquatic and terrestrial environments. A total of 39 isolates were obtained, which represented 39 unrecorded species in Korea belonging to 20 genera in 12 families. Enterobacteriaceae was the largest family, as eight species were assigned, which was followed by Moraxellaceae (6 species) and Pseudomonadaceae (5 species). At the genus level, Marinobacter (6 species), and Pseudomonas (5 species) were the main genera, and at least two species were obtained for Acinetobacter (3 species), Psychrobacter (3 species), Shewanella (2 species), Dickeya (2 species), Salinivibrio (2 species), Vibrio (2 species) and Rhodanobacter(2 species). The detailed description of each unrecorded species is provided.

Description of ten unrecorded bacterial species isolated from Ostrea denselamellosa and Eriocheir japonica from the Seomjin River

  • Choi, Ahyoung;Han, Ji-Hey;Kim, Eui-Jin;Cho, Ja Young;Hwang, Sun-I
    • Korean Journal of Environmental Biology
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    • v.37 no.4
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    • pp.592-599
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    • 2019
  • Ostrea denselamellosa and Eriocheir japonica samples were collected from the Seomjin River in 2019 as part of the "Research of Host-Associated Bacteria" research program. Almost 200 bacterial strains were isolated from the O. denselamellosa and E. japonica samples and subsequently identified by 16S rRNA gene sequencing. Among the bacterial isolates, ten strains possessed greater than 98.7% sequence similarity with published bacterial species that had not previously been recorded in Korea. These species were phylogenetically diverse, belonging to three phyla, four classes, seven orders, and eight genera. At the genus and class level, the previously unrecorded species belonged to Pseudoalteromonas, Aliivibrio, Rheinheimera, Leucothrix, and Shewanella of the class Gamma-proteobacteria, Olleya of the class Flavobacteriia, Algoriphagus of the class Cytophagia, and Lactococcus of the class Bacilli. The previously unrecorded species were further characterized by examining their Gram staining, colony and cell morphology, biochemical properties, and phylogenetic positions.