• Title/Summary/Keyword: structural relaxation

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A simple guide to the structural study on membrane proteins in detergents using solution NMR

  • Sim, Dae-Won;Lee, Yoo-sup;Seo, Min-Duk;Won, Hyung-Sik;Kim, Ji-hun
    • Journal of the Korean Magnetic Resonance Society
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    • v.19 no.3
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    • pp.137-142
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    • 2015
  • NMR-based structural studies on membrane proteins are appreciated quite challenging due to various reasons, generally including the narrow dispersion of NMR spectra, the severe peak broadening, and the lack of long range NOEs. In spite of the poor biophysical properties, structural studies on membrane proteins have got to go on, considering their functional importance in biological systems. In this review, we provide a simple overview of the techniques generally used in structural studies of membrane proteins by solution NMR, with experimental examples of a helical membrane protein, caveolin 3. Detergent screening is usually employed as the first step and the selection of appropriate detergent is the most important for successful approach to membrane proteins. Various tools can then be applied as specialized NMR techniques in solution that include sample deteuration, amino-acid selective isotope labeling, residual dipolar coupling, and paramagnetic relaxation enhancement.

Effect of slip system transition on the deformation behavior of Mg-Al alloy: internal variable based approach (비탄성 변형 이론을 바탕으로 한 Mg-Al 합금의 슬립기구 천이 현상 해석)

  • Lee H. S.;Bang W.;Chang Y. W.
    • Proceedings of the Korean Society for Technology of Plasticity Conference
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    • 2004.05a
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    • pp.186-189
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    • 2004
  • Although magnesium has high potential for structural material due to the lightweight and high specific strength, the structural application has been limited by the low ductility at room temperature. The reason of the poor ductility is few activated slip systems of magnesium (HCP structure) during deformation. As temperature increases, however, additional non-basal slip systems are incorporated to exhibit higher ductility comparable to aluminum. In the present study, a series of tensile tests of Mg-Al alloy has been carried out to study deformation behavior with temperature variation. Analysis of load relaxation test results based on internal variable approach gave information about relationship between the micromechanical character and corresponding deformation behavior of magnesium. Especially, the material parameter, p representing dislocation permeability through barriers was altered from 0.1 to 0.15 as the non-basal slip systems were activated at high temperature.

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Molecular Dynamics of Carbon Nanotubes Deposited on a Silicon Surface via Collision: Temperature Dependence

  • Saha, Leton C.;Mian, Shabeer A.;Kim, Hyo-Jeong;Saha, Joyanta K.;Matin, Mohammad A.;Jang, Joon-Kyung
    • Bulletin of the Korean Chemical Society
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    • v.32 no.2
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    • pp.515-518
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    • 2011
  • We investigated how temperature influences the structural and energetic dynamics of carbon nanotubes (CNTs) undergoing a high-speed impact with a Si (110) surface. By performing molecular dynamics simulations in the temperature range of 100 - 300 K, we found that a low temperature CNT ends up with a higher vibrational energy after collision than a high temperature CNT. The vibrational temperature of CNT increases by increasing the surface temperature. Overall, the structural and energy relaxation of low temperature CNTs are faster than those of high temperature CNTs.

Shape Finding of Cable-Net Structures by Using Modified Dynamic Relaxation Method (변형된 동적이완법을 이용한 케이블-네트 구조물의 형상해석)

  • 하창우;김재열;권택진
    • Proceedings of the Computational Structural Engineering Institute Conference
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    • 2000.10a
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    • pp.51-58
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    • 2000
  • Dynamic relaxation method is a shape finding analysis method for flexible structures by introducing the dynamic equilibrium equation. However, it is difficult for shape finding to estimate the most appropriate values for the mass and damping on each shape because the values are random one. In this study, the unit mass, the unit damping and the principal direction stiffness are utilized to avoid the random values, and the Newmarks assumption is introduced during the dynamic analysis. By introducing variant time increment method presented, the convergence time is reduced, that is, it can be reduced the total times for analysis.

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Effect of Slip System Transition on the Deformation Behavior of Mg-Al Alloy: Internal Variable Based Approach (비탄성 변형 이론을 바탕으로 한 Mg-Al 합금의 슬립기구 천이 현상 해석)

  • Lee H.S.;Chang Y. W.;Bang W.
    • Transactions of Materials Processing
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    • v.13 no.6 s.70
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    • pp.535-539
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    • 2004
  • Although magnesium has high potential for structural material due to the lightweight and high specific strength, the structural application has been limited by the low ductility at room temperature. The reason of the poor ductility is few activated slip systems of magnesium (HCP structure) during deformation. As temperature increases, however, additional non-basal slip systems are incorporated to exhibit higher ductility comparable to aluminum. In the present study, a series of tensile tests of Mg-Al alloy has been carried out to study deformation behavior with temperature variation. Analysis of load relaxation test results based on internal variable approach gave information about relationship between the micromechanical character and corresponding deformation behavior of magnesium. Especially, the material parameter, p representing dislocation permeability through barriers was altered from 0.1 to 0.15 as the non-basal slip systems were activated at high temperature.

Phase Transition and Relaxation Properties of Nonlinear-Optical KTP Single Crystal (비선형광학 단결정 KTP의 상전이 및 완화특성에 관한 연구)

  • Choi, Byung-Chun
    • Journal of Sensor Science and Technology
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    • v.7 no.6
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    • pp.386-393
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    • 1998
  • We have carried out the measurements of complex dielectric constants with impedance/gain-phase analyzer using capacitor method and the experiments of high temperature X-ray powder diffraction with X-ray diffractometer using ${\theta}-2{\theta}$ scan method for the KTP single crystal which has the premium nonlinear optical properties. From the results of high temperature X-ray powder diffraction experiments, we have found that KTP does not undergo structural phase transition below $900^{\circ}C$. It is clear that KTP undergoes structural phase transition around $900^{\circ}C$ and belongs to orthorhombic above $900^{\circ}C$ still. However, we have applied phenomenological relation of dielectric relaxation to the results of complex dielectric measurement and have found that relaxation mechanism of KTP well satisfies the Cole-Cole relation over the temperature range from $-78^{\circ}C$ to $200^{\circ}C$. And also the relaxation time well satisfies the Vogel-Fulcher relation. It is regarded that the hopping and thermally activated diffusion mechanism may control the conduction behavior of KTP above $200^{\circ}C$.

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Thermomechanical deformation in porous generalized thermoelastic body with variable material properties

  • Kumar, Rajneesh;Devi, Savita
    • Structural Engineering and Mechanics
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    • v.34 no.3
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    • pp.285-300
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    • 2010
  • The two-dimensional deformation of a homogeneous, isotropic thermoelastic half-space with voids with variable modulus of elasticity and thermal conductivity subjected to thermomechanical boundary conditions has been investigated. The formulation is applied to the coupled theory(CT) as well as generalized theories: Lord and Shulman theory with one relaxation time(LS), Green and Lindsay theory with two relaxation times(GL) Chandrasekharaiah and Tzou theory with dual phase lag(C-T) of thermoelasticity. The Laplace and Fourier transforms techniques are used to solve the problem. As an application, concentrated/uniformly distributed mechanical or thermal sources have been considered to illustrate the utility of the approach. The integral transforms have been inverted by using a numerical inversion technique to obtain the components of displacement, stress, changes in volume fraction field and temperature distribution in the physical domain. The effect of dependence of modulus of elasticity on the components of stress, changes in volume fraction field and temperature distribution are illustrated graphically for a specific model. Different special cases are also deduced.

Nonlinear dynamic analysis by Dynamic Relaxation method

  • Rezaiee-Pajand, M.;Alamatian, J.
    • Structural Engineering and Mechanics
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    • v.28 no.5
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    • pp.549-570
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    • 2008
  • Numerical integration is an efficient approach for nonlinear dynamic analysis. In this paper, general category of the implicit integration errors will be discussed. In order to decrease the errors, Dynamic Relaxation method with modified time step (MFT) will be used. This procedure leads to an alternative algorithm which is very general and can be utilized with any implicit integration scheme. For numerical verification of the proposed technique, some single and multi degrees of freedom nonlinear dynamic systems will be analyzed. Moreover, results are compared with both exact and other available solutions. Suitable accuracy, high efficiency, simplicity, vector operations and automatic procedures are the main merits of the new algorithm in solving nonlinear dynamic problems.

Sound Dispersion in Simple Fluids

  • Chung, Chang-Hyun
    • Nuclear Engineering and Technology
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    • v.6 no.3
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    • pp.171-182
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    • 1974
  • Sound dispersion in simple fluids is analyzed applying a generalized hydrodynamic ethod for time correlation functions. The effects of shear relaxation on the sound dispersion are examined for liquid argon and a dilute hard-sphere gas. In the case of liquid argon, the dispersion predicted by the theory over quite a wide range of wavenumbers exhibits the combined effects of shear relaxation and structural correlations. The results for a dilute gas indicate that that the inclusion of shear relaxation gives a qualitative improvement of Wavier-Stokes theory.

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