• Title/Summary/Keyword: soil microorganisms

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Evaluation of Bioremediation Efficiency of Crude Oil Degrading Microorganisms Depending on Temperature (온도에 따른 원유분해미생물의 생물학적 정화효율 평가)

  • Kim, Jong-Sung;Lee, In;Jeong, Tae-Yang;Oh, Seung-Taek;Kim, Guk-Jin
    • Journal of Soil and Groundwater Environment
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    • v.21 no.1
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    • pp.72-79
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    • 2016
  • Bioremediation is one of the most effective ways to remediate TPH-contaminated sites. However, under actual field conditions that are not at the optimum temperature, degradation of microorganisms is generally reduced, which is why the efficiency of biodegradation is known to be significantly affected by the soil temperature. Therefore, in this study, the labscale experiment was conducted using indigenous crude oil degrading microorganisms isolated from crude oil contaminated site to evaluate the remediation efficiency. Crude oil degrading microorganisms were isolated from crude oil contaminated soil and temperature, which is a significant factor affecting the remediation efficiency of land farming, was adjusted to evaluate the microbial crude oil degrading ability, degradation time, and remediation efficiency. In order to assess the field applicability, the remediation efficiency was evaluated using crude oil contaminated soil (average TPH concentration of 10,000 mg/kg or more) from the OO premises. Followed by the application of microorganisms at 30℃, the bioremediation process reduced its initial TPH concentration of 10,812 mg/kg down to 1,890 mg/kg in 56 days, which was about an 83% remediation efficiency. By analyzing the correlation among the total number of cells, the number of effective cells, and TPH concentration, it was found that the number of effective microorganisms drastically increased during the period from 10 to 20 days while there was a sharp decrease in TPH concentration. Therefore, we confirmed the applicability of land farming with isolated microorganisms consortium to crude oil contaminated site, which is also expected to be applicable to bioremediation of other recalcitrant materials.

Effects of Several Effective Microorganisms (EM) on the Growth of Chinese cabbage (Brassica rapa)

  • Hussein, Khalid A.;Joo, Jin-Ho
    • Korean Journal of Soil Science and Fertilizer
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    • v.44 no.4
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    • pp.565-574
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    • 2011
  • The development of satisfactory alternatives for supplying the nutrients needed by crops could decrease the problems associated with conventional NPK chemical fertilizers. In this study, the effects of bacterial and fungal effective microorganisms (EM) on the growth of Chinese cabbage (Brassica rapa) were evaluated. This investigation was carried out parrallel with conventional NPK chemical fertilizer and a commercial sold microbial fertilizer to compare between each of their effect. Sterile water and molasses were served as controls. Azotobacter chroococcum effect also was studied either alone or in combination with the effective microorganisms on the growth parameters. In contrast to the bacterial EM, the fungal EM alone without A. chroococcum had a more stimulating effect than fungal EM combined with A. chroococcum. Results showed that seedling inoculation significantly enhanced B. rapa growth. Shoot dry and fresh weight, and leaf length and width significantly were increased by both bacterial and fungal inoculation. The results indicated that the NPK chemical fertilizer deteriorates the microflora inhabiting the soil, while the effective microorganisms either fungal or bacterial ones increased the microbial density significantly. This study implies that both of fungal and bacterial EM are effective for the improvement of the Chinese cabbage growth and enhance the microorganisms in soil. The results showed antagonism occurred between A. chroococcum and each of Penicillium sp and Trichoderma sp in both agar and plant assays. The data were statistically analyzed by ANOVA and Dunnett test.

Effect of microbial product made of Bacillus stearothermophilus DL-3 on microorganisms in soil and growth of lettuce and Chinese cabbage. (Bacillus stearothermophilus DL-3 미생물 제재의 처리가 토양 미생물상 및 상추와 배추의 생장에 미치는 영향)

  • 김순희;배계선;양재균;이유정;오주성;정순재;문병주;이진우
    • Journal of Life Science
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    • v.14 no.5
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    • pp.778-787
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    • 2004
  • Effect of the microbial product made of Bacillus stearothermophilus DL-3, which was isolated from the soil and identified in this study, and rice bran on microorganisms in soil and growth of lettuce (Red skirt lettuce) and Chinese cabbage (Ga rack new No.1 Chinese cabbage) was investigated. Total numbers of microorganisms in the pot with untreated soil, treated with standard amount of microbial product and treated with double amounts of microbial product for growth of lettuce after 6 weeks were 2.78${\times}$10$^{7}$ CFU/g, 2.72${\times}$10$^{8}$ CFU/g and 3.63${\times}$10$^{8}$ CFU/g. Total numbers of microorganisms in the soil without treatment of microbial product and treated with standard amount of microbial product were 2.06${\times}$10$^{8}$ CFU/g and 5.49${\times}$10$^{8}$ CFU/g. Total numbers of microorganisms in the pot with untreated soil, treated with standard amount of microbial product and treated with double amounts of microbial product for growth of Chinse cabbage after 6 weeks were 1.43${\times}$10$^{7}$ CFU/g, 3.42${\times}$10$^{8}$ CFU/g and 7.22${\times}$10$^{8}$ CFU/g. Total numbers of microorganisms in the soil without treatment of microbial product and treated with standard amount of microbial product were 5.75${\times}$10$^{8}$ CFU/g and 7.96${\times}$10$^{8}$ CFU/g. On basis of leaf length, leaf width, leaf number, wet weight and dry weight, the growth of lettuce and Chinese cabbage on the soil treated with microbial product was faster than that on the untreated soil. The treatment of microbial product in the soil resulted in the increase of useful microorganisms, which seemed to enhance the growth of lettuce and Chinese cabbage.

Monitoring of Horizontal Gene Transfer from Agricultural Microorganisms to Soil Bacteria and Analysis of Microbial Community in Soils

  • Kim, Sung-Eun;Moon, Jae-Sun;Choi, Won-Sik;Lee, Sang-Han;Kim, Sung-Uk
    • Journal of Microbiology and Biotechnology
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    • v.22 no.4
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    • pp.563-566
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    • 2012
  • To investigate the possibility of horizontal gene transfer between agricultural microorganisms and soil microorganisms in the environment, Bacillus subtilis KB producing iturin and the PGPR recombinant strain Pseudomonas fluorescens MX1 were used as model microorganisms. The soil samples of cucumber or tomato plants cultivated in pots and the greenhouse for a six month period were investigated by PCR, real-time PCR, Southern hybridization, and terminal restriction fragment length polymorphism (T-RFLP) fingerprinting. Our data from Southern blotting and T-RFLP patterns suggest that the model bacteria do not give significant impacts on the other bacteria in the pots and greenhouse during cultivation.

Effects of a Biological Amendment on Chemical and Biological Properties and Microbial Diversity in Soils Receiving Different Organic Amendments (각기 다른 유기물이 투여된 토양에서 토양의 화학적, 미생물학적 특성과 미생물의 다양성에 미치는 생물비료의 효과)

  • Park, Kee-Choon;Kremer, Robert J.
    • Korean Journal of Soil Science and Fertilizer
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    • v.40 no.4
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    • pp.234-241
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    • 2007
  • Biological amendments consisting of suspensions of selected microorganisms are often used in conjunction with various organic materials for amending soils to improve soil quality and plant growth. The effects of the biological amendment on chemical and biological properties of soil were investigated for a biological amendmentalone and when combined with different organic materials includingmunicipal compost (MC), poultry litter (PL), and cover crops (red clover (RC) and spring oats). A liquid preparation of a biological amendment called Effective Microorganisms was sprayed on the tested plots three times over a two-year period. Effective Microorganisms alone did not influence pH, K, or organic matter content in soil. However, increases in P in PL-treated soils in fall of both years andCa in MC-treated soil in fall 2001, and decreases in Ca, Mg, and cation exchange capacity (CEC) in RC-planted soil were associated with EM. Increased dehydrogenase(DH) activitiesassociated with Effective Microorganismswere only detected in July (P=0.0222) and October (P=0.0834) for RC-planted soils in the first year. Fluorescein diacetate (FDA) hydrolysisappeared to be enhanced by Effective Microorganisms in soils untreated or treated with MC and oatsbut only sporadically during the sampling period. FDA hydrolysis in both PL- and RC-treated soils as well as DH activity in PL-treated soils decreased with Effective Microorganisms treatment. Effective Microorganisms did not influence substrate utilization patterns expressed by the BIOLOG assay. We conclude that Effective Microorganisms effects on soil chemical and biological properties varied depending on the added organic materials. Effective Microorganisms periodically increased soil DH activity and FDA hydrolysis with RC and with MC plus oats, respectively.

Development of Observation Equipment for Soil Microorganisms Using Vision System (비젼시스템을 이용한 토양미생물 관측장비 개발)

  • 김일배;홍원학;이학성;서명교;서정호
    • Journal of Environmental Health Sciences
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    • v.30 no.2
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    • pp.108-114
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    • 2004
  • Observation of microorganisms collected from contaminated soils has been mainly conducted by using microscopy. Microscopic measurement is occupied an important part of the microorganism experiment, and is used as an important tool to count microorganisms as well as to observe cellular form and mode of life in the field of soil microbe observation. In general, observation equipments for soil microbes consist of electron microscope, camera, frame grabber (image acquisition baud), and image analysis software. Because image analysis software should be linked with frame grabber most equipments have to be imported as the package form. Therefore, the observation system is very expensive and difficult to be operated. In this study, soil microbes' observation equipment with the vision system which is easy operated and cheaper than imported one was developed and tested. The efficiency of image capturing and data aquisition with developed frame grabber and software in this experiment was good enough to analyze the image of soil microorganism.

Optimization of Explosive Compounds (TNT and RDX) Biodegradation by Indigenous Microorganisms Activated by External Carbon Source (외부탄소원으로 활성화된 토착미생물에 의한 화약물질(TNT and RDX) 분해 최적화)

  • Park, Jieun;Bae, Bumhan
    • Journal of Soil and Groundwater Environment
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    • v.19 no.3
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    • pp.56-65
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    • 2014
  • Contamination of explosive compounds in the soils of military shooting range may pose risks to human and ecosystems. As shooting ranges are located at remote places, active remediation processes with hardwares and equipments are less practical to implement than natural solutions such as bioremediaton. In this study, a series of experiments was conducted to select a suitable carbon source and to optimize dosing rate for the enhanced bioremediation of explosive compounds in surface soils and sediments of shooting ranges with indigenous microorganisms activated by external carbon source. Treatability study using slurry phase reactors showed that the presence of indigenous microbial community capable of explosive compounds degradation in the shooting range soils, and starch was a more effective carbon source than glucose and acetic acid in the removal of TNT. However, at higher starch/soil ratio, i.e., 2.0, the acute toxicity of the liquid phase increased possibly due to transformation products of TNT. RDX degradation by indigenous microorganisms was also stimulated by the addition of starch but the acute toxicity of the liquid phase decreased with the increase of starch/soil ratio. Taken together, the optimum range of starch/soil ratio for the degradation of explosive compounds without significant increase in acute toxicity was found to be 0.2 of starch/soil.

Effect of Continuous Application of Organic Farming Materials on the Soil Physicochemistry Property and Plant Growth, Yield and Components of Tomato (유기농 자재의 연용이 토양의 이화학적 성질과 토마토의 생육, 수량 및 체내성분에 미치는 영향)

  • 오주성;이종성;강경희;김회태;정원복;정순재
    • Korean Journal of Organic Agriculture
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    • v.9 no.1
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    • pp.75-89
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    • 2001
  • This study the effects of the application of organic farming materials on the soil Physicochemistry property and plant growth, yield and components of Tomato were compared with conventional culture. The results obtained from the experiment are summarized as follows : 1. The effect of soil chemical properties after application organic farming materials, The amounts of pH and O.M. in N, P, K treated plot were few of change, To the contrary, fermentation compost and microorganisms fermentation compost treated plot were some increase, Amount of $P_2$$O_{5}$, Ca and K increase in comparison with the N, P, K treated plot. 2. Changes of soil microbial after application organic farming materials, The number of bacteria, actinomycetes and fungi in N, P, K treated plot were appeared definite direction. to the contrary, The number of bacteria and actimycetes in fermentation compost and microorganisms fermentation compost treated plot showed the increased tendency, The number of fungi showed the decreased tendency. 3. Effect of organic farming materials application on the growth and yield of tomato was superior in order of microorganisms fermentation compost plot〉 chemical fertilizers plot〉 fermentation compost plot. especially, chicken manure + microorganisms fermentation compost treated plot was the highest. 4. Effect of organic farming materials application on the components of tomato were not different.

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Detection of soil microorganisms of an upland or cultivated Codonopsis lanceolata and investigation of them affecting on flavor substances (산더덕과 재배더덕에 존재하는 토양미생물 및 향기 유발에 영향을 미치는 미생물 탐색)

  • 김동주;이진실;정가진;이세윤
    • Korean journal of food and cookery science
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    • v.20 no.4
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    • pp.418-422
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    • 2004
  • We investigated microbial populations of an upland and cultivated Codonopsis lanceolata. The microbial populations from both types of soils were also investigated. There were more than 10 microorganisms existed in upland than cultivated one. The total viable cell counts of C. lanceolata from upland and cultivated one, especially in the upper zone, were 9.7x10$\^$6/ CFU/g and 4.2${\times}$10$\^$6/ CFU/g, respectively. As a results, upper parts of C. lanceolata in upland were considered to harbour approximately more than 2.3 fold higher microorganisms than in cultivated one. However, the total viable cell counts between the two soil habitat, that is, 1.2${\times}$10$\^$7/ CFU/g from upland and 1.0x10$\^$7/ CFU/g from cultivated, were not significantly different. We also examined the unique flavor producing microorganisms in the soil extract broth including 25% C. lanceolata extract. One microorganism was detected in upper pars of C. lanceolata and upland soil. No. 6, microorganism causing the characteristic flavor of C. lanceolata was continued as Actinomyces by microscopy.

Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments

  • Jan, Umair;Feiwen, Rui;Masood, Jan;Chun, Se Chul
    • Mycobiology
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    • v.48 no.5
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    • pp.392-398
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    • 2020
  • This study was conducted to understand the dynamics of microbial communities of soil microorganisms, and their distribution and abundance in the indigenous microorganisms (IMOs) manipulated from humus collected from the forest near the crop field. The soil microorganisms originated from humus and artificially cultured microbial-based soil amendments were characterized by molecular and biochemical analyses. The bacterial population (2 × 106~13 × 106 CFU/g sample) was approximately 100-fold abundant than the fungal population (2 × 104~8 × 104 CFU/g sample). The 16S rDNA and ITS sequence analyses showed that the bacterial and fungal communities in humus and IMOs were mainly composed of Bacillus and Pseudomonas, and Trichoderma and Aspergillus species, respectively. Some of the bacterial isolates from the humus and IMOs showed strong inhibitory activity against soil-borne pathogenic fungi Fusarium oxysporum and Sclerotinia sclerotiorum. These bacteria also showed the siderophore production activity as well as phosphate solubilizing activity, which are requisite traits for biological control of plant pathogenic fungi. These results suggest that humus and IMOs could be a useful resource for sustainable agriculture.