• Title/Summary/Keyword: small organisms

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Analysis of Housekeeping Gene Expression in Mice Administered to GM and non-GM Cabbage (유전자변형 배추를 섭취한 마우스 장기에서의 Housekeeping Gene의 발현 분석)

  • Lee, Dong-Youb;Heo, Jin-Chul;Kim, Kyung-Hae;Han, Song-Yi;Cho, Hyun-Seok;Lee, Sang-Han
    • Food Science and Preservation
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    • v.15 no.1
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    • pp.84-87
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    • 2008
  • We used RT-PCR to measure housekeeping gene expression in mice fed GM and non-GM cabbage, in an effort to evaluate the risk of GM food to humans. After normalization of housekeeping gene levels, highly uniform expression may be seen in many organisms during various stages of development and under different environmental conditions. We assessed the expression of four genes in Chinese cabbage; these were Profilin, Tubulin-alpha (Tub-1), Heat-shock protein (Bchsp 17.6), and Ubiquitin conjugating enzyme (UBE). We measured the expression of four well-known housekeeping genes in mice: ${\beta}$-actin, (${\beta}$-act), ${\beta}$-2-microglobulin(B2m), Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and ${\beta}$-glucuronidase (Gus). Gene expression was measured in liver, stomach, small intestine, large intestine, kidney, and spleen of mice fed GM or non-GM cabbage. No significant expression differences were found.

Numerical Simulation of Ballast Water Exchange

  • Kamada, Koichi;Minami, Kiyokazu;Shiotani, Shigeaki;Shoji, Kuniaki
    • Proceedings of the Korean Institute of Navigation and Port Research Conference
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    • 2006.10a
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    • pp.157-165
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    • 2006
  • In February,2004, at International Maritime Organization (IMO), LONDON, a new international convention 'International Convention fur the Control and Management of Ship's Ballast Water and Sediment 2004' was adopted. It is called 'Ballast Water Management Convention (BWM)'. Ballast water means charged seawater or fresh water in ship's special tanks (ballast tank) to keep safety navigation and ship's maneuverability. However, from 1980, it was point out the serious problem for marine ecosystem and human life that ballast water includes harmful marine species (and small organisms) and these species are also discharged along with ballast water. These species were released with discharged ballast water in water areas, where species are different from discharged ballast water. The problem is that released species increase when released species are more powerful than native species and consequently, marine ecological system is destroyed in released water area. Authors have inspected the validity of the ballast water exchange using pumping-through method that is one of the methods of ballast water management. In this paper, the numerical simulation of the motion and density of the fluid at the time of exchange of the fluid in a 2-dimensional tank using the pumping-through method was carried out by using two different type numerical methods. One method is MPS method that is one of the particle methods. Other one is Finite Different Method (FDM). Authors were compared with result of two numerical method calculations and experiment result and reported some knowledge from these results.

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Analysis of the Causes of Flow Stagnation and Water Pollution in Yeouido Saetgang River (여의도 샛강 흐름 정체와 수질악화 원인 분석)

  • Kang, Hyeongsik
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.39 no.1
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    • pp.25-32
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    • 2019
  • The urban river has played an important role in biodiversity by providing various waterside areas in urban areas that are difficult for organisms to live in. The river is also used as a resting place and experience space for citizens. In particular, Yeouido Saetgang is the first ecological park in Korea, and it is located in the heart of downtown Seoul, making it highly valuable for its location and ecological value. However, water quality issues have continuously been raised since the construction project of Yeouido Saetgang river. So it is necessary to investigate the environment state and analyze the causes of the environment deterioration. In this study, the causes of the river stagnation and water quality deterioration in Yeouido Saetgang river were analyzed. For this, river surveys and aerial photo analysis were used to analyze the causes of difficulties in natural water circulation. Also, the results of monitoring water quality showed that the averaged level of BOD and T-P in dry season is III and IV, respectively, while that of BOD and T-P are V~VI in rainy season. In addition, through the drainage analysis of sewer network, small drainages that affect the water quality in Saetgang river was selected and discussed.

Production of transgenic cattle by somatic cell nuclear transfer (SCNT) with the human granulocyte colony-stimulation factor (hG-CSF)

  • Carvalho, Bruno P.;Cunha, Andrielle T.M.;Silva, Bianca D.M.;Sousa, Regivaldo V.;Leme, Ligiane O.;Dode, Margot A.N.;Melo, Eduardo O.
    • Journal of Animal Science and Technology
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    • v.61 no.2
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    • pp.61-68
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    • 2019
  • The hG-CSF (human Granulocyte Colony-Stimulating Factor) is a growth and stimulation factor capable of inducing the proliferation of bone marrow cells, several types of leukocytes, among other hematopoietic tissue cells. hG-CSF is used in used to treat anomalies that reder a small number of circulating white blood cells, which may compromise the immune defenses of the affected person. For these reasons, the production of hG-CSF in a bioreactor system using the mammary gland of genetic modified animals is a possibility of adding value to the bovine genetic material and reducing the costs of hG-CSF production in pharmaceutical industry. In this study, we aimed the production of transgenic hG-CSF bovine through the lipofection of bovine primary fibroblasts with an hG-CSF expression cassette and cloning these fibroblasts by the somatic cell nuclear transfer (SCNT) technique. The bovine fibroblasts transfected with the hG-CSF cassette presented a stable insertion of this construct into their genome and were efficiently synchronized to G0/G1 cell cycle stage. The transgenic fibroblasts were cloned by SCNT and produced 103 transferred embryos and 2 pregnancies, one of which reached 7 months of gestation.

Comparative Study on the Effect of Diving Apparatus Fishing Performance Index and Marine Environment in Yeosu, Korea (여수 잠수기어업의 어구 종류별 어획성능 및 해양환경 영향 비교 검토 연구)

  • Kang, Da-Young;Cha, Bong-Jin;Bea, Bong-Seong;Koo, Myung-Sung;Seo, Tae-Ho
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.6
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    • pp.1030-1035
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    • 2021
  • Diving fishermen are demanding permission to use an inspirator that can efficiently catch Manila clam; however, coastal fishermenargue that the use of inspirator devastates the seabed and depletes fishery resources. Therefore, the aim of this study was to evaluate the fishing power of diving gears and its effect on coastal fishing grounds. The average time taken to fish in the seabed (4 m2) with a rake, water gun, and an inspirator was 11.17 min, 13.33 min and 7.81 min, respectivelyThe values of catch per unit time with a rake, water gun, and an inspirator were 3.35 kg/min, 2.26 kg/min, and 3.83 kg/min, respectively. Suspended sediments were observed the most in the water gun fishing area, and were observed more in April when fishing was not carried out than in February when fishing was carried out. However, the difference in the amount of sediment deposited in the fishing area using the three-fishing gears was very small. For an accurate analysis of the impact of the fishing gears on the seabed, supplementary tests such as grain size analysis and changes in benthic organisms need to be conducted.

Mollusk Species Associated with the Scleractinian Coral Alveopora japonica Eguchi, 1968 Forming a Coral Carpet in Northwestern Jeju Island

  • Ronald G., Noseworthy;Hyun-Ki, Hong;Se-Jong, Ju;Hyun-Sung, Yang;Kwang-Sik, Choi
    • Ocean and Polar Research
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    • v.44 no.4
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    • pp.331-338
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    • 2022
  • The high latitude scleractinian coral Alveopora japonica Eguchi, 1965 occurs in high density in the shallow rocky subtidal in Jeju Island, forming coral carpets. Despite its ecological role providing a unique habitat for other benthic organisms, the benthic fauna associated with the A. japonica coral carpet is poorly known. To identify fauna associated with the coral carpet, we explored three sites dominated by A. japonica and one control site on northwestern Jeju Island in May 2013. Using SCUBA, we collected A. japonica and the epibenthic mega-fauna associated with the colonies in 1×1 m2 and identified them to the species level. At a depth of 10 to 15 m, A. japonica colonies heavily covered the seafloor, forming a layer called a coral carpet, with a density of 94 (Keumneung-ri), 133 (Biyangdo), and 155 (Gwidok-ri) colonies/m2. Thirty-four molluscan species were identified from the four sites, including 20 bivalves and 14 gastropods. The coral carpets were enriched with sessile bivalves compared to the control site, as we identified twenty bivalve and eight gastropod species from the coral carpets. Most bivalve species associated with the coral carpets had tropical-subtropical affinities, while gastropods were mainly subtropical and subtropical-low boreal species. Leiosolenus lischkei M. Huber, 2010, in the family Mytilidae and Barbatia steamsi (Pilsbry, 1895), in the family Arcidae, were the two most abundant bivalve species in the coral carpet, L. lischkei being a borer, and B. stearnsi a nestler. The tropical to subtropical Pacific star shell Astralium haematragum (Menke, 1829)was the most abundant gastropod at the study sites. The bivalves and gastropods associated with the coral carpet were small-sized juveniles or sub-adults, suggesting that the coral carpet provides a micro-habitat for the bivalves and gastropods.

The Application of Zooplankton Assemblage for the Evaluation of Aquatic Environments in Lentic Ecosystems (호소 생태계에서의 수환경 평가를 위한 동물플랑크톤 적용 연구)

  • Hyun-Woo Kim;Yu-Ji Heo;Kyung-Lak Lee
    • Korean Journal of Ecology and Environment
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    • v.56 no.1
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    • pp.83-93
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    • 2023
  • This study compares the abundance and community structure of zooplankton organisms from pelagic regions, and considers particularly the trophic levels vs. zooplankton abundances and biomass. Zooplankton samples were collected three times from May to November 2022, at 30 temperate lakes and reservoirs, which belong to four different river basins. The total zooplankton abundance, biomass and species index were showed considerable spatial variation. The spatial pattern of rotifer abundance was similar to that of total zooplankton abundance, while there were not showed similar patterns of zooplankton biomass (㎍ L-1) in lentic ecosystems. The rotifer strongly dominated the zooplankton assemblage in smaller lentic system than that of larger. A total of 130 species of zooplankton were identified (83 rotifers, 34 cladocerans and 13 copepods). The total average of zooplankton abundance and biomass were 213.7±342.3 Ind. L-1 (n=129) and 1382.8±1850.4 ㎍ L-1, respectively. Total and average of zooplankton abundance were usually dominated by the rotifers (>56.9%), while those of zooplankton biomass were dominated by the cladocerans and copepods (>73.6%) in lentic ecosystems. Considering the Trophic State Index (TSI), the factors of zooplankton abundance and biomass were included in between meso- and eutrophic states(27 lakes, 90% of all). The mean abundance and biomass of zooplankton in eutrophic systems were higher than that of meso- and hypertrophic systems. From this result, we suggest that management strategy for the lentic ecosystem water environment has to be focused more on small-sized lakes and reservoirs, in terms of zooplankton assemblages.

Feeding Habits of the Shotted Halibut, Eopsetta grigorjewi in the West Sea from Korea (한국 서해에 출현하는 물가자미, Eopsetta grigorjewi의 식성)

  • Dong Hyuk Choi;Byoung Il Youn;Soo Jeong Lee;Kyeong Ho Han;Dae Hyeon Kwon
    • Korean Journal of Ichthyology
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    • v.36 no.1
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    • pp.77-83
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    • 2024
  • The feeding habits of shotted halibut, Eopsetta grigorjewi, were studied by examining the stomach contents of 419 individuals. We collected E. grigorjewi samples using offshore gill net and bottom trawl in West Sea of Korea from January to December 2019. The specimens ranged in total length (TL) from 22.5 to 50.3 cm. The main prey organisms were Macrura and Pisces, while Brachyura, Ophiuroidea, Littorinimorpha and Paguridea were found small amounts. E. grigorjewi fed on Macrura in summer and autumn, and mainly fed on Pisces in winter and spring. Smaller individuals (<30 cm TL) consumed Macrura such as Crangon hakodatei. The proportion of these prey items decreased with increasing Pisces such as Ammodytes personatus and Engraulis japonicus. The feeding strategy of E. grigorjewi is estimated to maintain prey individual as they grow, but increase their prey weight.

Antifouling Activity towards Mussel by Small-Molecule Compounds from a Strain of Vibrio alginolyticus Bacterium Associated with Sea Anemone Haliplanella sp.

  • Wang, Xiang;Huang, Yanqiu;Sheng, Yanqing;Su, Pei;Qiu, Yan;Ke, Caihuan;Feng, Danqing
    • Journal of Microbiology and Biotechnology
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    • v.27 no.3
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    • pp.460-470
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    • 2017
  • Mussels are major fouling organisms causing serious technical and economic problems. In this study, antifouling activity towards mussel was found in three compounds isolated from a marine bacterium associated with the sea anemone Haliplanella sp. This bacterial strain, called PE2, was identified as Vibrio alginolyticus using morphology, biochemical tests, and phylogenetic analysis based on sequences of 16S rRNA and four housekeeping genes (rpoD, gyrB, rctB, and toxR). Three small-molecule compounds (indole, 3-formylindole, and cyclo (Pro-Leu)) were purified from the ethyl acetate extract of V. alginolyticus PE2 using column chromatography techniques. They all significantly inhibited byssal thread production of the green mussel Perna viridis, with $EC_{50}$ values of $24.45{\mu}g/ml$ for indole, $50.07{\mu}g/ml$ for 3-formylindole, and $49.24{\mu}g/ml$ for cyclo (Pro-Leu). Previous research on the antifouling activity of metabolites from marine bacteria towards mussels is scarce. Indole, 3-formylindole and cyclo (Pro-Leu) also exhibited antifouling activity against settlement of the barnacle Balanus albicostatus ($EC_{50}$ values of 8.84, 0.43, and $11.35{\mu}g/ml$, respectively) and the marine bacterium Pseudomonas sp. ($EC_{50}$ values of 42.68, 69.68, and $39.05{\mu}g/ml$, respectively). These results suggested that the three compounds are potentially useful for environmentally friendly mussel control and/or the development of new antifouling additives that are effective against several biofoulers.

Ecological Studies of Epizoic Algae Attached on the Freshwater Fishes in a Small Stream (lan Stream), South Korea (소하천에서 담수어류 표피에 부착된 미세조류의 생태학적 연구)

  • Shin, Jae-Ki;Seo, Jin-Won;Yi, Hye-Suk;Jeong, Seon-A;Hwang, Soon-Jin
    • Korean Journal of Ecology and Environment
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    • v.37 no.4 s.109
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    • pp.462-468
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    • 2004
  • Most of the surveys of periphyton carried out for environmental and ecosystem health assessment of streams have considered the impact made on their fixative substrates (stones, rocks, sand, silt, clay and other abiotic matters), but there has been virtually no research that considered moving substrates. This study attempted to make an analysis and assessment of the habitat environments of the microalgae attached to the skin surfaces of fish living in small streams, with a focus on their species composition and community structure. The dominant fish in the this survey were Zacco temmincki and Zacco platypus, which are usually found in the streams, and rivers, and they accounted for 62% and 19%, respectively, in relative abundance. Substrates of fish, a representative organism with the trait of moving a long distance, show a marked contrast with those of organisms fixed at a certain place. Characteristics of both the upstream and the downstream reach well reflected in the microalgae attached to the skin surface of fishes, of which diatoms took the major composition. The result of this observation is considered to be useful to provide basic data in assessment of stream health. Also it may be suggested as a biological tool for the assessment of aquatic environment in the future.