• 제목/요약/키워드: single cell MS

검색결과 62건 처리시간 0.025초

혈장 시료 풀링을 통한 신약 후보물질의 흡수율 고효율 검색기법의 평가 (Evaluation of a Sample-Pooling Technique in Estimating Bioavailability of a Compound for High-Throughput Lead Optimazation)

  • 이인경;구효정;정석재;이민화;심창구
    • Journal of Pharmaceutical Investigation
    • /
    • 제30권3호
    • /
    • pp.191-199
    • /
    • 2000
  • Genomics is providing targets faster than we can validate them and combinatorial chemistry is providing new chemical entities faster than we can screen them. Historically, the drug discovery cascade has been established as a sequential process initiated with a potency screening against a selected biological target. In this sequential process, pharmacokinetics was often regarded as a low-throughput activity. Typically, limited pharmacokinetics studies would be conducted prior to acceptance of a compound for safety evaluation and, as a result, compounds often failed to reach a clinical testing due to unfavorable pharmacokinetic characteristics. A new paradigm in drug discovery has emerged in which the entire sample collection is rapidly screened using robotized high-throughput assays at the outset of the program. Higher-throughput pharmacokinetics (HTPK) is being achieved through introduction of new techniques, including automation for sample preparation and new experimental approaches. A number of in vitro and in vivo methods are being developed for the HTPK. In vitro studies, in which many cell lines are used to screen absorption and metabolism, are generally faster than in vivo screening, and, in this sense, in vitro screening is often considered as a real HTPK. Despite the elegance of the in vitro models, however, in vivo screenings are always essential for the final confirmation. Among these in vivo methods, cassette dosing technique, is believed the methods that is applicable in the screening of pharmacokinetics of many compounds at a time. The widespread use of liquid chromatography (LC) interfaced to mass spectrometry (MS) or tandem mass spectrometry (MS/MS) allowed the feasibility of the cassette dosing technique. Another approach to increase the throughput of in vivo screening of pharmacokinetics is to reduce the number of sample analysis. Two common approaches are used for this purpose. First, samples from identical study designs but that contain different drug candidate can be pooled to produce single set of samples, thus, reducing sample to be analyzed. Second, for a single test compound, serial plasma samples can be pooled to produce a single composite sample for analysis. In this review, we validated the issue whether the second method can be applied to practical screening of in vivo pharmacokinetics using data from seven of our previous bioequivalence studies. For a given drug, equally spaced serial plasma samples were pooled to achieve a 'Pooled Concentration' for the drug. An area under the plasma drug concentration-time curve (AUC) was then calculated theoretically using the pooled concentration and the predicted AUC value was statistically compared with the traditionally calculated AUC value. The comparison revealed that the sample pooling method generated reasonably accurate AUC values when compared with those obtained by the traditional approach. It is especially noteworthy that the accuracy was obtained by the analysis of only one sample instead of analyses of a number of samples that necessitates a significant man-power and time. Thus, we propose the sample pooling method as an alternative to in vivo pharmacokinetic approach in the selection potential lead(s) from combinatorial libraries.

  • PDF

흉터 치료 촉진 효과를 갖는 치아 케어용 LED 모듈 개발과 광학적특성 분석 (Development of LED Module for Tooth Care with Effect of Promoting Scar Treatment and Analysis of Optical Properties)

  • 유균만;손정현;조현민;강소희;강성수;박성준
    • 한국산업융합학회 논문집
    • /
    • 제23권4_2호
    • /
    • pp.701-708
    • /
    • 2020
  • In this paper, we analyzed the optical properties of the LED module for dental care, which has the effect of promoting cell regeneration and scar treatment. The LED module is a U-shaped module suitable for the shape of teeth. It is manufactured with an LED module (632 nm) and an LED module (632 nm + 870 nm), analyzes the results of optical properties, sets the irradiation distance, irradiation time, and is effective in healing skin wounds. Evaluation was conducted. It was tested in 6 test groups according to the light irradiation conditions, and light was irradiated to the scar site every other day for 7 days, 1 day and 3 days. As a result, it was confirmed that the effect of scar treatment was the highest when the combined wavelength of 632 nm + 870 nm was irradiated in pulse mode than when the single wavelength was irradiated and the composite wavelength was continuously irradiated. In group C group irradiated with PW Mode: pulse mode (period 36 ms, pulse width 35 ms) using a composite wavelength with LED module (632 nm + 870 nm) than group A without light irradiation, the length of scar reduction was 19 %, the area of the scar was further reduced by 10%, and it was confirmed that it is effective in treating scars in the wound area.

홍경천 (Rhodiola sachalinensis A. Bor) 잎절편으로부터 식물체 재분화에 미치는 Cytokinin과 Putresine의 영향 (Effect of Cytokinin and Putrescine on Plant Regeneration from Leaf Explant of Rhodiola sachalinesis A. Bor)

  • 배기화;임순;윤의수;신차균;김윤영;김윤수
    • Journal of Plant Biotechnology
    • /
    • 제32권3호
    • /
    • pp.195-199
    • /
    • 2005
  • 홍경천(Rhodilola sachalinensis A. Bor)의 잎절편로부터 부정아를 유도하고자 BA와 kinetin을 처리한 결과, BA의 처리가 kinetin의 처리보다 부정아 유도와 신초의 생장에 양호한 것으로 나타났으며, 특히 BA 1 mg/L처리에서 부정아 유도빈도와 신초길이는 각각 71%와 3.0 mm로 가장 높게 나타났다. 또한 고빈도의 부정아를 유도하고자 다양한 농도의 putrescine를 처리한 결과, putrescine 100 mM 처리에서 부정아 유도빈도가 BA 1 mg/L 단용처리보다 약 20%가 증가되었고 신초길이 역시 약 10 mm가 증가된 것으로 나타났다. 이상의 결과에서 유도된 부정아는 생장조절물질이 포함되지 않은 1/2MS배지에서 발근과 신장이 정상적으로 이루어졌으며 약 7 cm 정도 생장한 유식물체는 peatmoss:sand가 1:1로 혼합된 상토에서 약 95%이상 정상적으로 순화되었다.

Observation of bubble dynamics under water in high-magnetic fields using a high-speed video camera

  • Lee, Seung-Hwan;Minoru Takeda
    • 한국항해항만학회:학술대회논문집
    • /
    • 한국항해항만학회 2004년도 춘계학술대회 논문집
    • /
    • pp.291-298
    • /
    • 2004
  • The observations of rapid motion of bubbles under water for approximately 50 ms or less in high-magnetic fields of 10 T have been carried out successfully for the first time. The observation system constructed is composed of a high-speed video camera, a telescope, a cryostat with a split-type superconducting magnet, a light source, a mirror and a transparent sample cell. Using this system, the influence of magnetic field on the path and shape of single bubbles of O$_2$ (paramagnetism) and N$_2$ (diamagnetism) has been examined carefully. Experimental values describing the path are in good agreement with theoretical values calculated on the basis of the magneto-Archimedes effect, despite the effect of magnetism on the bubble. However, no effect of magnetism on the shape of the bubble is observed. In addition, the influence of magnetic field on drag coefficient of the bubble is discussed.

  • PDF

Observation of bubble dynamics under water in high-magnetic fields using a high-speed video camera

  • Lee, Seung-Hwan;Takeda, Minoru
    • 한국항해항만학회지
    • /
    • 제28권2호
    • /
    • pp.141-148
    • /
    • 2004
  • The observations of rapid motion of bubbles under water for approximately 50ms or less in high . magnetic fields of 10 T have been carried out successfully for the first time. The observation system constructed is composed of a high-speed video camera, a telescope, a cryostat with a split-type superconducting magnet, a light source, a mirror and a transparent sample cell. Using this system, the influence of magnetic field on the path and shape of single bubbles of $O_2$(paramagnetism) and $N_2$ (diamagnetism) has been examined carefully. Experimental values describing the path are in good agreement with theoretical values calculated on the basis of the magneto-Archimedes effect, despite the effect of magnetism on the bubble. However, no effect of magnetism on the shape of the bubble is observed In addition, the influence of magnetic field on drag coefficient of the bubble is discussed.

High-yield Expression and Characterization of Syndecan-4 Extracellular, Transmembrane and Cytoplasmic Domains

  • Choi, Sung-Sub;Kim, Ji-Sun;Song, Jooyoung;Kim, Yongae
    • Bulletin of the Korean Chemical Society
    • /
    • 제34권4호
    • /
    • pp.1120-1126
    • /
    • 2013
  • The syndecan family consists of four transmembrane heparan sulfate proteoglycans present in most cell types and each syndecan shares a common structure containing a heparan sulfate modified extracellular domain, a single transmembrane domain and a C-terminal cytoplasmic domain. To get a better understanding of the mechanism and function of syndecan-4 which is one of the syndecan family, it is crucial to investigate its three-dimensional structure. Unfortunately, it is difficult to prepare the peptide because it is membrane-bound protein that transverses the lipid bilayer of the cell membrane. Here, we optimize the expression, purification, and characterization of transmembrane, cytoplasmic and short extracellular domains of syndecan4 (syndecan-4 eTC). Syndecan-4 eTC was successfully obtained with high purity and yield from the M9 medium. The structural information of syndecan-4 eTC was investigated by MALDI-TOF mass (MS) spectrometry, circular dichroism (CD) spectroscopy, and nuclear magnetic resonance (NMR) spectroscopy. It was confirmed that syndecan-4 eTC had an ${\alpha}$-helical multimeric structure like transmembrane domain of syndecan-4 (syndecan-4 TM) in membrane environments.

다채널기록법을 이용한 토끼 망막 신경절세포의 특성 분석 (Characterization of Rabbit Retinal Ganglion Cells with Multichannel Recording)

  • 조현숙;진계환;구용숙
    • 한국의학물리학회지:의학물리
    • /
    • 제15권4호
    • /
    • pp.228-236
    • /
    • 2004
  • 망막의 신경절세포는 눈에 가해진 시각 정보를 흥분파의 형태로 변환하여 시신경을 통하여 대뇌의 시각피질까지 전달한다. 과거에 사용하여 왔던 방법은 단일 전극을 단일 뉴론의 세포내, 외에 삽입함으로써 특정 시간대에 특정 뉴론만을 기록하는 방법이었으므로 신경망 전체를 통하여 처리되어 나오는 정보를 알아보기에는 적합하지 않다. 다행히 최근에 다채널 전극을 사용하여 여러 신경세포에서 나오는 신호를 동시에 기록할 수 있는 다채널기록법(multichannel recording) 이 개발되었으므로 본 연구에서는 8행 ${\times}$ 8열의 다채널전극을 사용한 다채널기록법을 이용하여 망막신경절세포 군집의 흥분파를 기록, 분석함으로써 단일 신경세포가 아닌 망막 신경망을 거쳐 최종적으로 나오는 신호에 대해서 연구하였다. 전극에 부착된 망막 절편에 2초 동안 빛을 가하고 5초 동안 빛이 차단되는 자극을 반복적으로 인가한 후, PSTH 분석방법으로 망막 신경절세포를 ON 세포, OFF세포, ON/OFF세포의 세가지 유형으로 분류할 수 있었으며, ON 세포: 35.0$\pm$4.4%, OFF 세포: 30.4$\pm$1.9%, ON/OFF 세포: 34.6$\pm$5.3% (전체 망막절편수=8)로 분포되어 있음을 확인하였다. 또한 상호상관(Cross-Correlation) 분석방법을 통해서 인접한 세포들끼리 매우 짧은 시간대에(<1 ms) 동기화된 흥분을 발사함을 확인할 수 있었고, 동기화된 흥분은 6~8개의 세포로 구성된 세포 클러스터에서 일어남을 확인하였다. 즉 개개의 신경절세포들이 빛 자극을 처리함에 있어 독립적으로 작용한다는 기존의 가정과는 달리 인접한 세포끼리는 동기화된 흥분을 보이는 것을 확인하였으며, 이러한 방식은 시세포 수와 신경절세포 수의 불균형으로 인해 초래되는 병목현상을 완화할 수 있는 효과적인 기전으로 생각된다.

  • PDF

인체 암세포주에서 방사선감수성의 지표간의 상호관계 (Correlation Between the Parameters of Radiosensitivity in Human Cancer Cell Lines)

  • 박우윤;김원동;민경수
    • Radiation Oncology Journal
    • /
    • 제16권2호
    • /
    • pp.99-106
    • /
    • 1998
  • 목적 : 임상에서 발생빈도가 높은 위선암, 폐선암, 망막세포종, 자궁경부 편평상피암의 4가지 인 체암세포주(MKN-45, PC-14, Y-79, HeL)를 이용하여 방사선조사후 세포생존분획 및 세포생존곡선의 모양을 결정하는 지표를 구하고 방사선조사후 손상 회복정도를 측정하여 이들 여러 지표간의 상관관계 여부를 구명하기 위하여 본실험을 시행하였다. 대상 및 방법 :각 세포주의 방사선감수성을 보기 위하여 1, 2, 3, 5, 7 및 10Gy의 방사선을 1 회 조사하였고 방사선조사후 준치사손상 회복정도를 보기 위하여 5Gy씩 2회의 방사선조사를 0, 1, 2, 3, 4, 6 및 24시간 간격으로 시행하였다. 세포의 생존분획은 $Sperman-K\"{a}rbor$ 방법으로 세포집락형성능력을 측정하여 산출하였으며 생존곡선의 수학적 분석은 linear-quadratic(LQ), multitarget-single hit(MS) 모형과 mean inactivation $dose(\v{D})$를 이용하였다. 결과 : 방사선조사후의 세포생존 실험결과 2Gy에서의 세포생존분획(SF2)은 0.174에서 0.85까지 다양하게 나타났으며 Y-79는 유의하게 낮은 SF2를, PC-14는 높은 SF2를 나타내었다(p<0.05, t-test). LQ model로 분석한 방사선 세포생존곡선의 분석결과 Y-79, MKN-45, HeLa, PC-14에서 ${\alpha}$가 각각 0.603, 0.355, 0.275, 0.102이었고 ${\beta}$는 각각 0.005, 0.016, 0.025, 0.027이었다. MS model로 분석한 결과는 Y-79, MKN-45, HeLa, PC-14에서 Do가 각각 1.59, 1.84, 1.88, 2.52였고 n은 0.97, 1.46, 1.52, 1.69를 보였다. 한편 Gauss-Laguerre방법으로 계산한 $\v{D}$는 Y-79, MKN-45, HeLa, PC-14에서 각각 1.62, 2.37, 2.61, 3.95였다. SF2가 감소함에 따라 ${\alpha}$값은 증가하였고 Do, $\v{D}$값은 감소하였으며 이들간의 Pearson 상관계수는 각각 0.953, 0.993, 0.999였다. (p<0.05). 분할조사에 의한 준치사손상 회복정도는 약 4시간 내외에 포화상태에 도달하였으며 포화상태의 recovery ratio(RR)는 2에서 3.79 사이였다. RR은 방사선감수성의 지표인 SF2, ${\alpha}$, ${\beta}$, Do, $\v{D}$과 통계학적으로 유의한 상관관계를 나타내지 않았다. 결론 : 본 연구의 결과 네가지 인체상피암세포주의 내재적 발사선감수성은 서로 상이하였으며 Y-79가 가장 민감하였고, MKN-45와 HeLa는 각각 중등도의 방사선감수성을 나타냈으며 PC-14는 방사선감수성이 가장 낮았다. 이와같은 감수성의 차이는 SF2, ${\alpha}$, Do와 $\v{D}$의 차이로 나타났으며 띠들간에는 밀접한 상관관계를 나타내었다. 방사선에 의한 준치사손상 회복력은 MKN-45와 HeLa에서 높게 나타났고 회복력과 방사선감수성과는 무관하였다. 각 암세포주에 따르는 이와같은 지표들은 향후 방사선치료 효과를 높이기 위한 방사선생물학 실험의 기초 자료로서 이용되어 질 수 있을 것이다.

  • PDF

Prostate Stem Cell Antigen Single Nucleotide Polymorphisms Influence Risk of Estrogen Receptor Negative Breast Cancer in Korean Females

  • Kim, Sook-Young;Yoo, Jae-Young;Shin, Ae-Sun;Kim, Yeon-Ju;Lee, Eun-Sook;Lee, Yeon-Su
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제13권1호
    • /
    • pp.41-48
    • /
    • 2012
  • Introduction: Breast cancer is the second leading cancer in Korean women. To assess potential genetic associations between the prostate stem cell antigen (PSCA) gene in the chromosome 8q24 locus and breast cancer risk in Korean women, 13 SNPs were selected and associations with breast cancer risk were analyzed with reference to hormone receptor (HR) and menopausal status. Methods:We analyzed DNA extracted from buffy coat from 456 patients and 461 control samples, using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) based upon region-specific PCR followed by allelespecific single base primer extension reactions. Risks associated with PSCA genotypes and haplotypes were estimated with chi-square test (${\chi}^2$-test), and polytomous logistic regression models using odds ratios (OR) and 95% confidence intervals (CIs), by HR and menopausal status. Results: In case-control analysis, odds ratios (OR) of rs2294009, rs2294008, rs2978981, rs2920298, rs2976395, and rs2976396 were statistically significant only among women with estrogen receptor (ER) negative cancers, and those of rs2294008, rs2978981, rs2294010, rs2920298, rs2976394, rs10216533, and rs2976396 were statistically significant only in pre-menopausal women, and not in postmenopausal women. Risk with the TTGGCAA haplotype was significantly elevated in ER (-) status (OR= 1.48, 95% CI= 1.03~2.12, p<0.05). Especially risk of allele T of rs2294008 is significantly low in pre-menopausal breast cancer patients and AA genotype of rs2976395 in ER (-) status represents the increase of OR value. Conclusion: This report indicated for the first time that associations exist between PSCA SNPs and breast cancer susceptibility in Korean women, particularly those who are pre-menopausal with an estrogen receptor negative tumor status.

Hot Wall Epitaxy(HWE)법에 의한 MnAl2S4 단결정 박막 성장과 광전도 특성 (Growth and optical conductivity properties for MnAl2S4 single crystal thin film by hot wall epitaxy method)

  • 유상하;이기정;홍광준;문종대
    • 한국결정성장학회지
    • /
    • 제24권6호
    • /
    • pp.229-236
    • /
    • 2014
  • 수평 전기로에서 $MnAl_2S_4$ 다결정을 합성하여 HWE(Hot Wall Epitaxy)방법으로 $MnAl_2S_4$ 단결정 박막을 반절연성 GaAs(100)기판에 성장시켰다. $MnAl_2S_4$ 단결정 박막의 성장 조건은 증발원의 온도 $630^{\circ}C$, 기판의 온도 $410^{\circ}C$였고 성장 속도는 $0.5{\mu}m/hr$였다. 이때 $MnAl_2S_4$ 단결정 박막의 결정성의 조사에서 이중결정 X-선 요동곡선(DCRC)의 반폭치(FWHM)도 132 arcsec로 가장 작아 최적 성장 조건임을 알 수 있었다. $MnAl_2S_4$/SI(Semi-Insulated) GaAs(100) 단결정 박막의 광흡수를 293 K에서 10 K까지 측정하였다. 광흡수 스펙트럼으로부터 band gap $E_g(T)$는 Varshni 공식에 따라 계산한 결과 $E_g(T)=3.7920eV-(5.2729{\times}10^{-4}eV/K)T^2/(T+786K)$였다. $MnAl_2S_4$ 단결정 박막의 응용소자인 photocell로 사용할 수 있는 pc/dc 값이 가장 큰 광전도셀은 S 증기분위기에서 열처리한 셀로 $1.10{\times}10^7$이었으며, 광전도 셀의 감도(sensitivity)도 S 증기분위기에서 열처리한 셀이 0.93로 가장 좋았다. 또한 최대 허용소비전력(MAPD)값도 S 증기분위기에서 열처리한 셀이 316 mW로 가장 좋았으며, S 증기분위기에서 열처리한 셀의 응답시간은 오름시간 14.8 ms, 내림시간 12.1 ms로 가장 빠르게 나타나, $MnAl_2S_4$ 단결정 박막을 S 분위기에서 $290^{\circ}C$로 30분 열처리한 photocell이 상용화가 가능할 것으로 여겨진다.