• Title/Summary/Keyword: sequences

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Exploring the Limit of Natural Number Sequences Using Spreadsheet (스프레드시트에 기초한 자연수 수열의 극한 연구)

  • Kim, Jin-Hwan
    • Communications of Mathematical Education
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    • v.26 no.2
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    • pp.205-220
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    • 2012
  • In this article convergent sequences with natural number terms are investigated and the behaviors of tails and limits of these natural number sequences are explored. Firstly this study showed how the pre-service teachers response to the intuitive limit definition using "getting closer" for constant sequences. As a case of convergent natural sequences, the sequences in which the latter term is determined by the sum of digit squares of the former term are considered. To exploring these sequences the computational and charting capabilities of spreadsheets are utilized and some mathematical findings are obtained. Spreadsheet can be instrumentalized by teachers or students to provide a laboratory-like environment to explore a mathematical problem.

Complete Genome Sequences of the Genomic RNA of Soybean mosaic virus Strains G7B and G5

  • Kim, Kook-Hyung;Lim, Won-Seok;Kim, Yul-Ho
    • The Plant Pathology Journal
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    • v.19 no.3
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    • pp.171-176
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    • 2003
  • The complete nucleotide sequences of the genomic RNAs of Soybean mosaic virus strains GS (SMV-G5) and G7H (SMV-G7H) were determined and compared with sequences of other SMV strains. Each viral RNA was determined to be 9588 nucleotides in length excluding the poly (A) tail and contained an open reading frame to encode a polyprotein subsequently processed into up to ten proteins by proteolytic cleavage. Com-parison of the amino acid sequences with those of other SMV strains showed high percentage of amino acid sequence homology with the same genome organization. The nucleotide and the deduced amino acid sequences between SMV-G5 and SMV-G7H were greater than 99% identity. When compared with those of other SMV strains in a phylogenetic analysis of the nucleotide and deduced amino acid sequences, they formed a distinct virus clade showing over 97% amino acid identity, but were more distantly related to the other potyvirus (44.1-69.6% identity). Interestingly, SMV G7H strain caused a severe mosaic or necrosis symptom in soybean cultivars including Jinpum-1, Jinpum-2, and Sodam, whereas, no symptom was observed in SMV-G5 inoculation. Complete nucleotide sequences of these strains will give clues for determining symptom determinant(s) in future research.

Design and Analysis of Linear Span of A New Family of Non-linear Binary Sequences with 5-Valued Cross-Correlation Functions (5-값 상호상관관계를 갖는 새로운 비선형 이진수열군의 설계와 선형스팬 분석)

  • Choi, Un-Sook;Cho, Sung-Jin;Kim, Han-Doo
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.17 no.3
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    • pp.619-626
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    • 2013
  • The design of PN(Pseudo Noise) sequences with good cross-correlation properties is important for many research areas in communication systems. In this paper we propose new family of binary sequences $S^r=\{Tr_1^m\{[Tr_m^n(a{\alpha}^t+{\alpha}^{dt})]^r\}{\mid}a{\in}GF(2^n),\;0{\leq}t<2^n-1\}$ composed of Gold-like sequences and find the value of cross-correlation function when $d=2^{n-1}(3{\cdot}2^m-1)$, where n=2k, gcd(r, $2^m-1$)=1. Also we analyze the linear span of $S^r$ for some special r. Proposed sequences are extension of Gold-like sequences and GMW-sequences.

A Study on Generation of Free Stereo Mosaic Image Using Video Sequences (비디오 프레임 영상을 이용한 자유 입체 모자이크 영상 제작에 관한 연구)

  • Noh, Myoung-Jong;Cho, Woo-Sug;Park, June-Ku
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.27 no.4
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    • pp.453-460
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    • 2009
  • For constructing 3D information using aerial photograph or video sequences, left and right stereo images having different viewing angle should be prepared in overlapping area. In video sequences, left and right stereo images would be generated by mosaicing left and right slice images extracted in consecutive video sequences. Therefore, this paper is focused on generating left and right stereo mosaic images that are able to construct 3D information and video sequences could be made for the best use. In the stereo mosaic generation, motion parameters between video sequences should be firstly determined. In this paper, to determine motion parameters, free mosaic method using geometric relationship, such as relative orientation parameters, between consecutive frame images without GPS/INS geo-data have applied. After determining the motion parameters, the mosaic image have generated by 4 step processes: image registration, image slicing, determining on stitching line, and 3D image mosaicking. As the result of experiment, generated stereo mosaic image and analyzed result of x, y-parallax have showed.

Linear Complexities of Sequences over Unknown Symbol Sets and Constructions of Sequences over CF($p^k$) whose Characteristic Polynomials are over GF($p^{k}$ ) (임의의 심볼 집합 상의 수열의 선형복잡도와 GF(p)상의 특성다항식을 갖는 GF($p^k$)상의 수열 생성에 관한 연구)

  • Hong, Yun-Pyo;Eun, Yu-Chang;Kim, Jeong-Heon;Song, Hong-Yeop
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.28 no.5C
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    • pp.443-451
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    • 2003
  • We propose an appropriate approach of defining the linear complexities (LC) of sequences over unknown symbol set. We are able to characterize those p-ary sequences whose R-tuple versions now eve. GF($p^{R}$ ) have the same characteristic polynomial as the original with respect to any basis. This leads to a construction of $p^{R}$ -ary sequences whose characteristic polynomial is essentially over GF(p). In addition, we can characterize those $p^{R}$ -ary sequences whose characteristic polynomials are uniquely determined when symbols are represented as R-tuples over GF(p) with respect to any basis.

Sturcture of the Rice Glutelin Multigene Family and Its Expression (쌀 Glutelin 유전자군의 구조 및 발현조절)

  • 황영수
    • Proceedings of the Botanical Society of Korea Conference
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    • 1987.07a
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    • pp.261-282
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    • 1987
  • Plants store a significant amount of their nitrogen, sulfur and carbon reserves as storage proteins in seed tissues. The major proteins present in rice seeds are the glutelins. Glutelins are initially synthesized at 4-6 days postanthesis and deposited into protein bodies via Golgi apparatus. Based on nucleic acid sequences and Southern blot analysis, the three isolated glutelin genomic clones were representative members of three gene subfamilies each containing 5 to 8 copies. A comparison of DNA sequences displayed by relevant regions of these genomic clones showed that two subfamilies, represented by clones, Gt1 and Gt2, were closely, related and probably evolved by more recent gene duplication events. The 5' flanking and coding sequences of Gt1 and Gt2 displayed at least 87% homolgy. In contrast, Gt3 showed little or no homolgy in the 5' flanking sequences upstream of the putative CAAT boxes and exhibited significant divergence in all other portions of the gene. Conserved sequences in the 5' flanking regions of these genes were identified and discussed in light of their potential regulatory role. The derived primary sequences of all three glutelin genomic clones showed significant homology to the legume 11S storage proteins indicating a common gene origin. A comparison of the derived glutelin primary sequences showed that mutations were clustered in three peptide regions. One peptide region corresponded to the highly rautable hypervariable region of legume peptide region of legume 11S storage proteins, a potential target area for protein modification. Expression studies indicated that glutelin mRNA transcripts are differentially accumulated during endosperm development. Promoterss of Gt2 and Gt3 were functional as they direct transient expression of chloramphenicol acetyltransferase in cultured plant cell.

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Heterogeneity Analysis of the 16S rRNA Gene Sequences of the Genus Vibrio (Vibrio 속 16S rRNA 유전자 염기서열의 이질성 분석)

  • Ki, Jang-Seu
    • Korean Journal of Microbiology
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    • v.45 no.4
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    • pp.430-434
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    • 2009
  • Bacterial 16S rRNA gene sequences have been widely used for the studies on molecular phylogeny, evolutional history, and molecular detections. Bacterial genomes have multiple rRNA operons, of which gene sequences sometimes are variable. In the present study, heterogeneity of the Vibrio 16S rRNA gene sequences were investigated. Vibrio 16S rRNA sequences were obtained from GenBank databases, considering the completion of gene annotation of Vibrio genome sequences. These included V. cholerae, V. harveyi, V. parahaemolyticus, V. splendidus, and V. vulnificus. Chromosome 1 of the studied Vibrio had 7~10 copies of the 16S rRNA gene, and their intragenomic variations were less than 0.9% dissimilarity (more than 99.1% DNA similarity). Chromosome 2 had none or single 16S rRNA gene. Intragenomic 16S rRNA genotypes were detected at least 5 types (V. vulnificus #CMCP6) to 8 types (V. parahaemolyticus #RIMD 2210633, V. harveyi #ATCC BAA-1116). These suggest that Vibrio has high heterogeneity of the 16S rRNA gene sequences.

Implementation of an Information Management System for Nucleotide Sequences based on BSML using Active Trigger Rules (BSML 기반 능동 트리거 규칙을 이용한 염기서열정보관리시스템의 구현)

  • Park Sung Hee;Jung Kwang Su;Ryu Keun Ho
    • Journal of KIISE:Databases
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    • v.32 no.1
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    • pp.24-42
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    • 2005
  • Characteristics of biological data including genome sequences are heterogeneous and various. Although the need of management systems for genome sequencing which should reflect biological characteristics has been raised, most current biological databases provide restricted function as repositories for biological data. Therefore, this paper describes a management system of nucleotide sequences at the level of biological laboratories. It includes format transformation, editing, storing and retrieval for collected nucleotide sequences from public databases, and handles sequence produced by experiments. It uses BSML based on XML as a common format in order to extract data fields and transfer heterogeneous sequence formats. To manage sequences and their changes, version management system for originated DNA is required so as to detect transformed new sequencing appearance and trigger database update. Our experimental results show that applying active trigger rules to manage changes of sequences can automatically store changes of sequences into databases.

Poverty Profiles and Job Sequences of the Working Poor (근로빈곤층의 빈곤이력과 노동경력)

  • Lee, Juhwan;Kim, Kyo-seong
    • Korean Journal of Social Welfare Studies
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    • v.44 no.3
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    • pp.323-346
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    • 2013
  • The main purpose of this study is to analyze job sequences according to poverty profiles that the working poor have had. For the stated purpose, this study examines characteristics and patterns of job sequences by diving the subgroups, using the 10 year data of KLIPS and the sequence analysis. Major findings are as follows. The working-transient poor have different characteristics, such as longer working term, less job change, less number of gap and length, and relatively higher monthly income, from the working-recurrent poor and the working-persistent poor. However, there are no different characteristics between the working-recurrent poor and working-persistent poor, except for monthly income. Job sequences are divided into 5 clusters and job sequences types according to the working poor subgroups are quite different. Such analysis results would contribute to planning poverty policies based on job sequences differently seen in subgroups and finding specific policy alternatives to relieve the working poor.

On the complexity of earthquake sequences: a historical seismology perspective based on the L'Aquila seismicity (Abruzzo, Central Italy), 1315-1915

  • Guidoboni, Emanuela;Valensise, Gianluca
    • Earthquakes and Structures
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    • v.8 no.1
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    • pp.153-184
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    • 2015
  • Most damaging earthquakes come as complex sequences characterized by strong aftershocks, sometimes by foreshocks and often by multiple mainshocks. Complex earthquake sequences have enormous seismic hazard, engineering and societal implications as their impact on buildings and infrastructures may be much more severe at the end of the sequence than just after the mainshock. In this paper we examine whether historical sources can help characterizing the rare earthquake sequences of pre-instrumental times in full, including fore-, main- and aftershocks. Thanks to the its huge documentary heritage, Italy relies on one of the richest parametric earthquake catalogues worldwide. Unfortunately most current methods for assessing seismic hazard require that earthquake catalogues be declustered by removing all shocks that bear some dependency with those identified as mainshocks. We maintain that this requirement has led most modern historical seismologists to focus mainly on mainshocks rather than also on the fore- and aftershocks. To shed light onto major earthquake sequences of the past, rather than onto individual mainshocks, we investigated 10 damaging earthquake sequences ($M_w$ 4.7-7.0) that hit the L'Aquila area and central Abruzzo from the 14th to the 20th century. We find that most of the results of historical research are important for modern seismology, yet their rendering by the current parametric catalogues causes most information to be lost or not easily transferred to the potential users. For this reason we advocate a change in current strategies and the creation of a more flexible standard for storing and using all the information made available by historical seismology.