• Title/Summary/Keyword: relative abundance

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EVALUATION OF MICROBIAL RISK IN SOIL AMENDED WITH ORGANIC FERTILIZERS FROM STABILIZED SWINE MANURE WASTE

  • Han, Il;Lee, Young-Shin;Park, Joon-Hong
    • Environmental Engineering Research
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    • v.12 no.4
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    • pp.129-135
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    • 2007
  • This study evaluated microbial risk that could develop within soil microbial communities after amended with organic fertilizers from stabilized swine manure waste. For this purpose, we assessed the occurrences and competitiveness of antibiotic resistance and pathogenicity in soil microbial communities that were amended with swine manure wastes stabilized by a traditional lagoon fermentation process and an autothermal thermophilic aerobic digestion process, respectively. According to laboratory cultivation detection analysis, soil applications of the stabilized organic fertilizers resulted in increases in absolute abundances of antibiotic resistant bacteria and of two tested pathogenic bacteria indicators. The increase in occurrences might be due to the overall growth of microbial communities by the supplement of nutrients from the fertilizers. Meanwhile, the soil applications were found to reduce competitiveness for various types of antibiotic resistant bacteria in the soil microbial communities, as indicated by the decrease in relative abundances (of total viable heterotrophic bacteria). However, competitiveness of pathogens in response to the fertilization was pathogens-specific, since the relative abundance of Staphylococcus was decreased by the soil applications, while the relative abundance of Salmonella was increased. Further testes revealed that no MAR (multiple antibiotic resistance) occurrence was detected among cultivated pathogen colonies. These findings suggest that microbial risk in the soil amended with the fertilizers may not be critical to public health. However, because of the increased occurrences of antibiotic resistance and pathogenicity resulted from the overall microbial growth by the nutrient supply from the fertilizers, potential microbial risk could not be completely ruled out in the organic-fertilized soil samples.

Effect of Ultrasonic Irradiation on On-board Fuel Analyzed Using Gas Chromatography/Mass Spectrometry (GC/MS를 이용한 선박연료유에 대한 초음파조사 효과 분석)

  • Choi, Jung-Sik
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.27 no.6
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    • pp.890-897
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    • 2021
  • Since the enforcement of strict regulations on marine fuel oil sulfur content, demand for Low Sulfur Fuel Oil (LSFO) has been increasing. However, as LSFO properties vary greatly depending on the supply timing, region, and supplier, LSFOs can experience problems with sludge formation, blending compatibility, and stability once mixed into storage tanks. This study investigates using ultrasound cavitation effects to improve the quality of LSFOs in storage tanks. For marine gas oil (MGO), the results showed that the relative ratio of high molecular weight compounds to those of low molecular weight decreased after ultrasonic irradiation, due to cavitation-induced cracking of chemical bonds. For marine diesel oil (MDO) and blended oil, a small increase in the relative abundance of low weight molecular compounds was observed after treatment. However, no correlation between time and relative abundance was observed.

Influence of Weed Management Practices on Ground-dwelling Arthropod Assemblages in Organic and Conventional Apple Orchards (유기재배와 관행재배 사과원 내 지표 배회성 절지동물 군집에 대한 잡초 관리의 영향)

  • Kim, Jiwon;Jung, Chuleui
    • Korean journal of applied entomology
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    • v.60 no.1
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    • pp.105-114
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    • 2021
  • Ground-dwelling arthropods are important components in apple orchard providing beneficial ecological services of predation and decomposition as well as herbivory. Groundcovers are managed differentially in organic and conventional apple orchards influencing ground-dwelling arthropod assemblages. We conducted 3-year studies to assess the effects of orchard management relative to weed management on the abundance and diversity of ground-dwelling arthropods using pitfall trapping. Most arthropods were classified as higher taxonomical groups and functional feeding guilds, while carabid beetles were classified into species level. Coleoptera was the dominating taxon of all ground-dwelling arthropods. Abundance of herbivores and predators was significantly higher in organic apple orchards than conventional ones. Higher abundance and diversity of carabid beetles were found in organic orchards than in conventional orchards. The abundance of Araneae, Coleoptera, or carabid beetles was negatively correlated to weed management frequency. It was found that ground-dwelling arthropods were more influenced by weed management practices than the farming systems.

THEORETICAL STUDY ON OBSERVED COLOR-MAGNITUDE DIAGRAMS

  • Lee, See-Woo
    • Journal of The Korean Astronomical Society
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    • v.12 no.1
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    • pp.41-70
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    • 1979
  • From $B\ddot{o}hm$-Vitense's atmospheric model calculations, the relations, [$T_e$, (B-V)] and [B.C, (B-V)] with respect to heavy element abundance were obtained. Using these relations and evolutionary model calculations of Rood, and Sweigart and Gross, analytic expressions for some physical parameters relating to the C-M diagrams of globular clusters were derived, and they were applied to 21 globular clusters with observed transition periods of RR Lyrae variables. More than 20 different parameters were examined for each globular cluster. The derived ranges of some basic parameters are as follows; $Y=0.21{\sim}0.33,\;Z=1.5{\times}10^{-4}{\sim}4.5{\times}10^{-3},\;age,\;t=9.5{\sim}19{\times}10^9$ years, mass for red giants, $m_{RG}=0.74m_{\odot}{\sim}0.91m_{\odot}$, mass for RR Lyrae stars, $m_{RR}=0.59m_{\odot}{\sim}0.75m_{\odot}$, the visual magnitude difference between the turnoff point and the horizontal branch (HB), ${\Delta}V_{to}=3.1{\sim}3.4(<{\Delta}V_{to}>=3.32)$, the color of the blue edge of RR Lyrae gap, $(B-V)_{BE}=0.17{\sim}0.21=(<(B-V)_{BE}>=0.18),\;[\frac{m}{L}]_{RR}=-1.7{\sim}-1.9$, mass difference of $m_{RR}$ relative to $m_{RG},(m_{RG}-m_{RR})/m_{RG}=0.0{\sim}0.39$. It was found that the ranges of derived parameters agree reasonably well with the observed ones and those estimated by others. Some important results obtained herein can be summarized as follows; (i) There are considerable variations in the initial helium abundance and in age of globular clusters. (ii) The radial gradient of heavy element abundance does exist for globular clusters as shown by Janes for field stars and open clusters. (iii) The helium abundance seems to have been increased with age by massive star evolution after a considerable amount (Y>0.2) of helium had been attained by the Big-Bang nucleosynthesis, but there is not seen a radial gradient of helium abundance. (iv) A considerable amount of heavy elements ($Z{\sim}10{-3}$) might have been formed in the inner halo ($r_{GC}$<10 kpc) from the earliest galactic co1lapse, and then the heavy element abundance has been slowly enriched towards the galactic center and disk, establishing the radial gradient of heavy element abundance. (v) The final galactic disk formation might have taken much longer by about a half of the galactic age than the halo formation, supporting a slow, inhomogeneous co1lapse model of Larson. (vi) Of the three principal parameters controlling the morphology of C-M diagrams, it was found that the first parameter is heavy clement abundance, the second age and the third helium abundance. (vii) The globular clusters can be divided into three different groups, AI, BI and CII according to Z, Y an d age as well as Dickens' HB types. BI group clusters of HB types 4 and 5 like M 3 and NGC 7006 are the oldest and have the lowest helium abundance of the three groups. And also they appear in the inner halo. On the other hand, the youngest AI clusters have the highest Z and Y, and appear in the innermost halo region and in the disk. (viii) From the result of the clean separations of the clusters into three groups, a three dimensional classification with three parameters, Z, Y and age is prsented. (ix) The anomalous C-M diagrams can be expalined in terms of the three principal parameters. That is, the anomaly of NGC 362 and NGC 7006 is accounted for by the smaller age of the order of $1{\sim}2{\times}10^9$ years rather than by the helium abundance difference, compared with M 3. (x) The difference in two Oosterhoff types I and II can be explained in terms of the mean mass difference of RR Lyrae variables rather than in terms of the helium abundance difference as suggested by Stobie. The mean mass of the variables in Oosterhoff type I clusters is smaller by $0.074m_{\odot}$ which is exactly consistent with Rood's estimate. Since it was found that the mean mass of RR Lyrae stars increases with decreasing Z, the two Oosterhoff types can be explained substantially by the metal abundance difference; the type II has Z<$3.4{\times}10^{-4}$, and the type I has higher Z than the type II.

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Essential oil mixture on rumen fermentation and microbial community - an in vitro study

  • Kim, Hanbeen;Jung, Eunsang;Lee, Hyo Gun;Kim, Byeongwoo;Cho, Seongkeun;Lee, Seyoung;Kwon, Inhyuk;Seo, Jakyeom
    • Asian-Australasian Journal of Animal Sciences
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    • v.32 no.6
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    • pp.808-814
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    • 2019
  • Objective: The objective of this study was to investigate the effects of essential oil mixture (EOM) supplementation on rumen fermentation characteristics and microbial changes in an in vitro. Methods: Three experimental treatments were used: control (CON, no additive), EOM 0.1 (supplementation of 1 g EOM/kg of substrate), and EOM 0.2 (supplementation of 2 g EOM/kg of substrate). An in vitro fermentation experiment was carried out using strained rumen fluid for 12 and 24 h incubation periods. At each time point, in vitro dry matter digestibility (IVDMD), neutral detergent fiber digestibility (IVNDFD), pH, ammonia nitrogen ($NH_3-N$), and volatile fatty acid (VFA) concentrations, and relative microbial diversity were estimated. Results: After 24 h incubation, treatments involving EOM supplementation led to significantly higher IVDMD (treatments and quadratic effect; p = 0.019 and 0.008) and IVNDFD (linear effect; p = 0.068) than did the CON treatment. The EOM 0.2 supplementation group had the highest $NH_3-N$ concentration (treatments; p = 0.032). Both EOM supplementations did not affect total VFA concentration and the proportion of individual VFAs; however, total VFA tended to increase in EOM supplementation groups, after 12 h incubation (linear; p = 0.071). Relative protozoa abundance significantly increased following EOM supplementation (treatments, p<0.001). Selenomonas ruminantium and Ruminococcus albus (treatments; p<0.001 and p = 0.005), abundance was higher in the EOM 0.1 treatment group than in CON. The abundance of Butyrivibrio fibrisolvens, fungi and Ruminococcus flavefaciens (treatments; p<0.001, p<0.001, and p = 0.005) was higher following EOM 0.2 treatment. Conclusion: The addition of newly developed EOM increased IVDMD, IVNDFD, and tended to increase total VFA indicating that it may be used as a feed additive to improve rumen fermentation by modulating rumen microbial communities. Further studies would be required to investigate the detailed metabolic mechanism underlying the effects of EOM supplementation.

Effects of a multi-strain probiotic on growth, health, and fecal bacterial flora of neonatal dairy calves

  • Guo, Yongqing;Li, Zheng;Deng, Ming;Li, Yaokun;Liu, Guangbin;Liu, Dewu;Liu, Qihong;Liu, Qingshen;Sun, Baoli
    • Animal Bioscience
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    • v.35 no.2
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    • pp.204-216
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    • 2022
  • Objective: The aim of this study was to investigate the effects of dietary supplementation with a multi-strain probiotic (MSP) product containing of Bifidobacterium animalis, Lactobacillus casei, Streptococcus faecalis, and Bacillus cerevisiae on growth, health, and fecal bacterial composition of dairy calves during the first month of life. Methods: Forty Holstein calves (24 female and 16 male) at 2 d of age were grouped by sex and date of birth then randomly assigned to 1 of 4 treatments: milk replacer supplementation with 0 g (0MSP), 2 g (2MSP), 4 g (4MSP), and 6 g (6MSP) MSP per calf per day. Results: Supplementation of MSP did not result in any significant differences in parameters of body measurements of calves during the 30 d period. As the dosage of MSP increased, the average daily gain (p = 0.025) and total dry matter intake (p = 0.020) of calves showed a linear increase. The fecal consistency index of the 2MSP, 4MSP, and 6MSP group calves were lower than that of the 0MSP group calves (p = 0.003). As the dosage of MSP increased, the concentrations of lactate dehydrogenase (p = 0.068) and aspartate aminotransferase (p = 0.081) in serum tended to decrease, whereas the concentration of total cholesterol increased quadratically (p = 0.021). The relative abundance of Dorea in feces was lower (p = 0.011) in the 2MSP, 4MSP, and 6MSP group calves than that in the 0MSP group calves. The relative abundance of Dorea (p = 0.001), Faecalibacterium (p = 0.050), and Mitsuokella (p = 0.030) decreased linearly, whereas the relative abundance of Prevotella tended to increase linearly as the dosage of MSP increased (p = 0.058). Conclusion: The MSP product can be used to reduce the diarrhea, improve the performance, and alter the composition of the fecal bacteria in neonatal dairy calves under the commercial conditions.

Effect of Soil Microbial Diversity in Paddy Wetland under Organic Rice-Fish Mixed Farming System (유기농 복합생태 논습지의 토양 미생물 다양성 증진 효과)

  • Han, Yangsoo;Park, Choongbae;Cho, Jung-Lai;Park, Sang-Gu;Kong, Min-Jae;Nam, Hong-Shik;Son, Jinkwan
    • Journal of Wetlands Research
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    • v.24 no.2
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    • pp.69-82
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    • 2022
  • In this study, we investigated the bacterial community structure in organic rice-fish mixed farming paddy soil by using high-throughput sequencing technology. The results showed that compared with the organic rice cultivated soil, the content of AP (available phosphorus) increased by 310.23 % and the content of OM (organic matter) increased by 168.83%. The most abundant phyla in paddy soils were Proteobacteria, Bacteriodetes, and Chloroflexi, whose relative abundance was above 47.83%. Among the dominant genera, the relative abundance of Limisphaera in paddy soils was observed. Alpha diversity indicated that the bacterial diversity of paddy soils was similar among each other. The bacterial community structure was affected by the relative abundance of bacteria, not the species of bacteria. Principal Coordinated Analysis (PCoA) results showed that the bacterial communities in organic rice-fish mixed farming soil and organic paddy soil were correlated to each other; the bacterial community structure was distinctively grouped by four different systems (paddy soil under organic rice-fish mixed farming system, organic rice cultivation, and conventional rice cultivation), where the first two are closely related to each other than the third one. The results provide basal support for organic agri-cultivation while improving an ecological value at the same time.

Seasonal Changes in the Microbial Communities on Lettuce (Lactuca sativa L.) in Chungcheong-do, South Korea

  • Woojung Lee;Min-Hee Kim;Juyeon Park;You Jin Kim;Eiseul Kim;Eun Jeong Heo;Seung Hwan Kim;Gyungcheon Kim;Hakdong Shin;Soon Han Kim;Hae-Yeong Kim
    • Journal of Microbiology and Biotechnology
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    • v.33 no.2
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    • pp.219-227
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    • 2023
  • Lettuce is one of the most consumed vegetables worldwide. However, it has potential risks associated with pathogenic bacterial contamination because it is usually consumed raw. In this study, we investigated the changes in the bacterial community on lettuce (Lactuca sativa L.) in Chungcheong-do, South Korea, and the prevalence of foodborne pathogens on lettuce in different seasons using 16S rRNA gene-based sequencing. Our data revealed that the Shannon diversity index showed the same tendency in term of the number of OTUs, with the index being greatest for summer samples in comparison to other seasons. Moreover, the microbial communities were significantly different between the four seasons. The relative abundance of Actinobacteriota varied according to the season. Family Micrococcaceae was most dominant in all samples except summer, and Rhizobiaceae was predominant in the microbiome of the summer sample. At the genus level, the relative abundance of Bacillus was greatest in spring samples, whereas Pseudomonas was greatest in winter samples. Potential pathogens, such as Staphylococcus and Clostridium, were detected with low relative abundance in all lettuce samples. We also performed metagenome shotgun sequencing analysis on the selected summer and winter samples, which were expected to be contaminated with foodborne pathogens, to support 16S rRNA gene-based sequencing dataset. Moreover, we could detect seasonal biomarkers and microbial association networks of microbiota on lettuce samples. Our results suggest that seasonal characteristics of lettuce microbial communities, which include diverse potential pathogens, can be used as basic data for food safety management to predict and prevent future outbreaks.

Seasonal Variations in Populations of Small Fishes Concentrated in Shoalgrass and Turtlegrass (Shoalgrass와 turtlegrass에 棲息하는 小型魚類 個體群들의 季節的 變動에 관한 硏究)

  • Huh, Sung-Hoi
    • 한국해양학회지
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    • v.19 no.1
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    • pp.44-55
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    • 1984
  • Abundances of small fishes that utilized seagrass meadows of Redfish Bay, Texas, were analyzed quantitatively to determine monthly changes of this concentrated subtropical fish community during 1982-1983. an effective quantitative sampler, a 1-㎡ thrown cage, yielded a total of 10,223 fishes that comprised 40 species in 23 families, with average total densities about 15 fishes/㎡ in shoalgrass meadow and 6 fishes/㎡ in turtlegrass meadow. The darter goby, pinfish, code goby, and Gulf pipefish were the four most abundant species, and accounted for approximately 85% of the number of fish collected. However, the two different meadows had different relative abundances of fishes. The darter goby numerically dominated shallower shoalgrass meadow, while the pinfish and code goby were the commonest fishes in deeper turtlegrass meadow. Seasonal changes in both species composition and abundances of fish populations were major characteristics in these subtropical seagrass medows. Peak abundance of total fishes occurred during spring, with a secondary peak in fall. Lowest abundance of total fishes occurred in winter. Each abundant species showed its own seasonal abundance pattern, and had a peak abundance 1-3 months separated from other species, with some overlap of increased larval recruitment. Such distinct seasonal abundance patterns with different times of peak recruitment. Such distinct seasonal abundance patterns with different times of peak recruitment among fish species seem to permit use of the seagrass habitats with reduced, seasonal competition.

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A Study on the Identification of Target Compounds From the GC/MS Data (GC/MS분석자료의 목표물질 인식에 관한 연구)

  • 민홍기;홍승홍
    • Journal of Biomedical Engineering Research
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    • v.10 no.3
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    • pp.223-228
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    • 1989
  • In this paper, the computerized interpretation of the analytical chemical data, especially GC/MS data, was performed for the purpose of prescreening of the target compounds. First, the data from the analytical instrument was analyzed to get the information about the retention time of the ISTD and the time inteval between the records. Second, the identification of the characteristic ion peaks was performed by calculating the ratio of the heights and the relative slope sensitivity of the characteristic mass abundance.

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