• 제목/요약/키워드: reference size

검색결과 1,272건 처리시간 0.028초

Accuracy of genotype imputation based on reference population size and marker density in Hanwoo cattle

  • Lee, DooHo;Kim, Yeongkuk;Chung, Yoonji;Lee, Dongjae;Seo, Dongwon;Choi, Tae Jeong;Lim, Dajeong;Yoon, Duhak;Lee, Seung Hwan
    • Journal of Animal Science and Technology
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    • 제63권6호
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    • pp.1232-1246
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    • 2021
  • Recently, the cattle genome sequence has been completed, followed by developing a commercial single nucleotide polymorphism (SNP) chip panel in the animal genome industry. In order to increase statistical power for detecting quantitative trait locus (QTL), a number of animals should be genotyped. However, a high-density chip for many animals would be increasing the genotyping cost. Therefore, statistical inference of genotype imputation (low-density chip to high-density) will be useful in the animal industry. The purpose of this study is to investigate the effect of the reference population size and marker density on the imputation accuracy and to suggest the appropriate number of reference population sets for the imputation in Hanwoo cattle. A total of 3,821 Hanwoo cattle were divided into reference and validation populations. The reference sets consisted of 50k (38,916) marker data and different population sizes (500, 1,000, 1,500, 2,000, and 3,600). The validation sets consisted of four validation sets (Total 889) and the different marker density (5k [5,000], 10k [10,000], and 15k [15,000]). The accuracy of imputation was calculated by direct comparison of the true genotype and the imputed genotype. In conclusion, when the lowest marker density (5k) was used in the validation set, according to the reference population size, the imputation accuracy was 0.793 to 0.929. On the other hand, when the highest marker density (15k), according to the reference population size, the imputation accuracy was 0.904 to 0.967. Moreover, the reference population size should be more than 1,000 to obtain at least 88% imputation accuracy in Hanwoo cattle.

두 표본 순위 검파에서 기준 표본 크기가 검파기 성능에 미치는 영향 (Effects of the Reference Sample Size on the Performance of the Two-Sample Rank Detector)

  • 배진수
    • 한국통신학회논문지
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    • 제40권8호
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    • pp.1515-1517
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    • 2015
  • 이 논문에서는 두 표본을 쓰는 순위 검파기의 성능과 기준 표본 크기의 상관 관계를 모의실험을 통해 밝힌다. 기준 표본의 크기가 클수록 검파기의 성능은 더 우수하다. 다만 기준 표본 크기가 커질수록 성능향상은 포화된다.

Comparison of prediction accuracy for genomic estimated breeding value using the reference pig population of single-breed and admixed-breed

  • Lee, Soo Hyun;Seo, Dongwon;Lee, Doo Ho;Kang, Ji Min;Kim, Yeong Kuk;Lee, Kyung Tai;Kim, Tae Hun;Choi, Bong Hwan;Lee, Seung Hwan
    • Journal of Animal Science and Technology
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    • 제62권4호
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    • pp.438-448
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    • 2020
  • This study was performed to increase the accuracy of genomic estimated breeding value (GEBV) predictions for domestic pigs using single-breed and admixed reference populations (single-breed of Berkshire pigs [BS] with cross breed of Korean native pigs and Landrace pigs [CB]). The principal component analysis (PCA), linkage disequilibrium (LD), and genome-wide association study (GWAS) were performed to analyze the population structure prior to genomic prediction. Reference and test population data sets were randomly sampled 10 times each and precision accuracy was analyzed according to the size of the reference population (100, 200, 300, or 400 animals). For the BS population, prediction accuracy was higher for all economically important traits with larger reference population size. Prediction accuracy was ranged from -0.05 to 0.003, for all traits except carcass weight (CWT), when CB was used as the reference population and BS as the test. The accuracy of CB for backfat thickness (BF) and shear force (SF) using admixed population as reference increased with reference population size, while the results for CWT and muscle pH at 24 hours after slaughter (pH) were equivocal with respect to the relationship between accuracy and reference population size, although overall accuracy was similar to that using the BS as the reference.

다중참조 및 가변블록 움직임 추정을 위한 고속 참조영상 선택 방법 (Fast Frame Selection Method for Multi-Reference and Variable Block Motion Estimation)

  • 김성대;선우명훈
    • 대한전자공학회논문지SP
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    • 제45권6호
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    • pp.1-8
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    • 2008
  • 이 논문은 다중참조 및 가변블록 움직임 추정의 연산량을 효율적으로 줄이기 위해 세 가지 참조영상 선택 방법들을 소개한다. 제안된 RSP (Reference Selection Pass) 방법은 참조영상 선택의 부가적인 연산을 최소화 할 수 있고 MFS (Modified Frame Selection) 방법은 참조영상 선택 과정 중 영상의 움직임을 고려하여 참조영상 선택 시 연산 횟수를 기존 방식에 비해 17% 감소시킨다. 또한 TPRFS (Two Pass Reference frame Selection) 방법은 H.264/AVC에서 요구하는 가변블록 움직임 추정을 지원하기 위한 부가적인 연산을 블록 크기에 따라 선택되는 참조영상의 특성을 이용하여 최소화 한다. 실험 결과 제안한 방식은 기존의 방식에 비해 화질의 열화 없이 50% 이상의 움직임 추정의 연산량을 감소시킬 수 있다. 또한 제안한 참조영상 선택 방법은 움직임 추정의 주된 연산인 블록정합 단계와 별개로 수행이 되기 때문에 기존의 어떠한 단일참조 고속 움직임 탐색 방법과도 같이 사용되어 효율적으로 다중참조 및 가변블록 움직임 추정 연산을 지원 할 수 있다.

동영상 부호화의 움직임 추정 및 보상을 위한 고속 다중 참조 프레임 선택 기법 (Fast Multiple Reference Frame Selection Method for Motion Estimation and Compensation in Video Coding)

  • 김재훈;김명진;홍민철
    • 한국통신학회논문지
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    • 제32권11C호
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    • pp.1066-1072
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    • 2007
  • 본 논문에서는 동영상 부호화 방식의 움직임 추정을 위한 고속 다중 참조 프레임 선택 기법에 대해 제안한다. 움직임 추정을 위해 다중 프레임을 참조하는 H.264 동영상 부호화 방식의 경우, 블록별로 선택된 최적의 참조 프레임들은 일정한 상관관계를 유지하는 특성이 존재한다. 제안 방식은 이러한 통계적 특성을 이용하여, 임의의 블록 크기의 움직임 추정 모드에서 선택된 최적의 참조 프레임 정보를 이용하여 하위 블록 크기의 움직임 추정 모드에서 사용할 참조 프레임을 예측한다. 실험 결과를 통해 5개의 참조 프레임 사용을 기준으로 제안하는 기법을 사용하였을 때, 움직임 추정에 소요되는 시간은 가용한 모든 참조 프레임에 대해 움직임 추정을 수행하는 방식 대비 평균 60% 감소되었으며, PSNR 및 발생 비트율 측면에서 거의 동일한 성능을 유지함을 확인할 수 있었다.

A Web Cache Replacement Technique of the Divided Scope Base that Considered a Size Reference Characteristics of Web Object

  • Seok, Ko-Il
    • 한국콘텐츠학회:학술대회논문집
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    • 한국콘텐츠학회 2003년도 춘계종합학술대회논문집
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    • pp.335-339
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    • 2003
  • We proposed a Web cache replacement technique of a divided scope base that considered a size reference characteristics of a Web object for efficient operation of a Web base system and, in this study, analyzed performance of the replacement technique that proposed it though an experiment. We analyzed a reference characteristics of size to occur by a user reference characteristics through log analysis of a Web Base system in an experiment. And we divide storage scope of a cache server as its analysis result and tested this replacement technique based n divided scope. The proposed technique has a flexibility about a change of a reference characteristics of a user. Also, experiment result, we compared it with LRU and the LRUMIN which were an existing replacement technique and confirmed an elevation of an object hit ratio.

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Fast Reference Region Adjustment Using Sizing Factor Generation in Correlation-Based Image Tracking

  • Sung, Si-Hun;Chien, Sung-Il
    • Journal of Electrical Engineering and information Science
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    • 제3권2호
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    • pp.230-238
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    • 1998
  • When size and shape of moving object have been changed, a correlator often accumulates walk-off error. A success of correlation-based tracking largely depends on choosing suitable window size and position and thus transferring the proper reference image to the next frame. For this, we propose the Adaptive Window Algorithm with Four-Direction Sizing Factors (AWA-FSF) for fast adjusting a reference region to enhance reliability of correlation-based image tracking in complex cluttered environments. Since the AWA-FSF is capable of adjusting a reference image size more rapidly and properly, we can minimize the influence of complex background and clutter. In addition, we can finely tune the center point of the reference image repeatedly after main tracking process. Thus we have increased stability and reliability of correlation-based image tracking. We tested performance of the AWA-FSF using 45 real image sequences made of over 3400 images and had the satisfied results for most of them.

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초음파검사에 의한 간 크기 측정방법 및 정상 성인의 체격지수별 참조범위 (Liver Size Measurement Method by Ultrasonography and Reference Range based on Normal Adult Physique Index)

  • 김용균;한동균
    • 대한방사선기술학회지:방사선기술과학
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    • 제41권1호
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    • pp.13-24
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    • 2018
  • Liver size is an important component in the diagnosis and follow-up of diffuse liver disease when testing for liver disease using ultrasonography. However, difficulties lies in determining the presence of hepatomegaly and liver atrophy because the method used for measuring liver size differs from one examiner to another and there is no relevant standard based on body build. The present study aims to propose a more objective method for liver size measurement and a reference range based on body build. A total of 260 normal adults (130 males, 130 females) participated in the study. Ultrasonography was performed in all participants to measure the size of the right lobe, left lobe, quadrate lobe, and caudate lobe of liver. Based on Physique Index(PI), a value derived from multiplying weight(kg) by height($m^2$), size of physique was divided into three groups including Group I with PI<150, Group II with $150{\leq}PI{\leq}250$, and Group III with PI>250. Thus, mean liver size by PI and a reference range with 95% reliability were suggested. The superoinferior diameter of right lobe was $12.34{\pm}1.18cm$ in males and $11.07{\pm}0.93cm$ in females, and its reference range was 10.64~11.0cm for Group I, 11.78~12.12cm for Group II, and 13.02~13.84cm for Group III. The anteroposterior diameter(T) of left lobe was $5.93{\pm}1.09cm$ in males and $5.18{\pm}0.99cm$ in females, and its reference range was 4.77~5.17cm for Group I, 5.49~5.79cm for Group II, and 6.68~7.44cm for Group III. The transverse diameter was $3.51{\pm}0.60cm$ in male participants and $3.42{\pm}0.49cm$ in female participants and its reference range was 3.29~3.51cm for Group I, 3.36~3.55cm for Group II, and 3.52~4.0cm for Group III. The caudate lobe index was $11.65{\pm}2.88cm^2$ in males and $9.62{\pm}2.18cm^2$ in females and its reference range was $8.83{\sim}9.75cm^2$ for Group I, $10.62{\sim}11.47cm^2$ for Group II, and $11.89{\sim}14.26cm^2$ for Group III. As a basic measurement method of liver size, the present study suggests measuring the superoinferior diameter for right liver lobe, the anteroposterior diameter for left liver lobe, the transverse diameter for quadrate lobe, and the caudate lobe index for caudate lobe. It is expected that this method along with its relevant reference range can be used as useful indicators in determining hepatomegaly and liver atrophy upon the diagnosis and follow-up testing of diffuse liver disease.

Dynamic Reference Scheme with Improved Read Voltage Margin for Compensating Cell-position and Background-pattern Dependencies in Pure Memristor Array

  • Shin, SangHak;Byeon, Sang-Don;Song, Jeasang;Truong, Son Ngoc;Mo, Hyun-Sun;Kim, Deajeong;Min, Kyeong-Sik
    • JSTS:Journal of Semiconductor Technology and Science
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    • 제15권6호
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    • pp.685-694
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    • 2015
  • In this paper, a new dynamic reference scheme is proposed to improve the read voltage margin better than the previous static reference scheme. The proposed dynamic reference scheme can be helpful in compensating not only the background pattern dependence but also the cell position dependence. The proposed dynamic reference is verified by simulating the CMOS-memristor hybrid circuit using the practical CMOS SPICE and memristor Verilog-A models. In the simulation, the percentage read voltage margin is compared between the previous static reference scheme and the new dynamic reference scheme. Assuming that the critical percentage of read voltage margin is 5%, the memristor array size with the dynamic scheme can be larger by 60%, compared to the array size with the static one. In addition, for the array size of $64{\times}64$, the interconnect resistance in the array with the dynamic scheme can be increased by 30% than the static reference one. For the array size of $128{\times}128$, the interconnect resistance with the proposed scheme can be improved by 38% than the previous static one, allowing more margin on the variation of interconnect resistance.

시판 유아동복 치수체계에 관한 연구 (A Study on the Current Status of Sizing System for Infants' & Children's Clothing)

  • 정명숙;강혜진;장인선
    • 복식
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    • 제64권2호
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    • pp.70-83
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    • 2014
  • This study was done to provide the basic data for improving the sizing system for infants and children's clothing. The 97 brands were surveyed through market research and on-line searching. Size and body measurements were analyzed according to the content of nominal size, type of market, national and foreign brands, and meaning of reference size. The results are as follows: 1. The meaning of nominal sizes was categorized as five cases: the size based on body measurements, the size based on age, the meaningless size, letter cord and combination of 2 out of 4 cases above. The nominal size based on height was most observed, and the meaningless nominal size was second. The meaningless nominal size can cause confusion when consumer buys clothing. 2. The department stores mainly used the nominal size based on body measurements, but the Internet shopping malls largely used the meaningless nominal size. 3. Both national brands and foreign brands mainly used the nominal size based on height. But national brands largely used the different nominal sizes. 4. 41 brands indicated body measurements as reference size and 26 brands indicated product measurements as reference size. Therefore consumers tended to confuse the body measurements with the product measurement.