• Title/Summary/Keyword: red Sea

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Genetic Species Identification by Sequencing Analysis of Nuclear and Mitochondrial Genes for Albino Misgurnus Species from Korea (우리나라 미꾸리속(genus Misgurnus) 알비노 개체의 미토콘드리아 및 핵 유전자 염기서열 분석에 의한 유전적 동정)

  • Song, Ha-Youn;Moon, Shin-Joo;Kim, Keun-Sik;Bang, In-Chul
    • Korean Journal of Ichthyology
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    • v.29 no.2
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    • pp.139-145
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    • 2017
  • The spontaneous color mutant, albino individuals of genus Misgurnus, are rarely discovered in Korea and there are difficult to identify morphological species due to lack melanin pigmentation. In this study, we developed a genetic identification method for the species of albino Misgurnus individuals based on phylogenetic analysis by using recombination activating gene 1 (rag1) and cytochrome b (cytb) region of mitochondrial DNA. As a result of molecular phylogenetic analysis, three clades were identified as Misgurnus mizolepis, M. anguillicaudatus and M. mohoity. The homology of the cytb sequences of M. mohoity was best match to that of M. mohoity sequences in GenBank database. As a result of species identification of 25 albino Misgurnus individuals based on the phylogenetic tree, the red-eye type was identified as 16 M. anguillicaudatus and one M. mizolepis. The remaining three individuals were identified as one M. mizolepis ♀${\times}$M. anguillicaudatus ♂, and two M. mohoity ♀${\times}$M. anguillicaudatus ♂, respectively. In addition, the five black-eye type individuals were identified as one M. anguillicaudatus, three M. mizolepis and one M. mohoity. Therefore, this genetic identification method will be an useful techniques for species or hybrid identification in genus Misgurnus.

Effect of Water Temperature on Infectivity of the Parasitoid Amoebophrya sp. Infecting the Harmful Bloom-forming Dinoflagellate Akashiwo sanguinea (유해 적조생물 Akashiwo sanguinea를 감염시키는 포식성 기생생물 Amoebophrya sp.의 감염력에 대한 수온의 영향)

  • JUNG, YOUNGGYO;KIM, SUNJU
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.23 no.1
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    • pp.20-31
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    • 2018
  • Marine parasitoid Amoebophrya infects and kills various bloom-forming dinoflagellates and strongly influences the harmful algal bloom dynamics. We investigated the effect of temperature on survival, infectivity, generation time of the parasite from the parasitoid Amoebophrya sp. and the harmful dinoflagellate host Akashiwo sanguinea system. Temperature had a significant effect on the parasite generation time and infectivity. While the lower temperature ($15^{\circ}C$) arrested parasite intracellular development and infectivity, resulting in the longer generation time ($115{\pm}0.1h$), the higher temperatures ($25^{\circ}C$ and $20^{\circ}C$) accelerated the parasite development, with the generation times of $58{\pm}0.1h$ and $83{\pm}0.1h$, respectively. Parasite prevalence (percent of host infected) was $71.5{\pm}0.30%$, $54.3{\pm}1.68%$, and $29.6{\pm}1.42%$ at $25^{\circ}C$, $20^{\circ}C$, and $15^{\circ}C$, respectively. These results suggest that biological control by parasitism on A. sanguinea bloom would not be highly effective during low water temperature season. Further, water temperature would be an important factor of bottom-up controls for the host-parasite population dynamics.

Mass Mortalities of Cultured Striped Beakperch, Oplegnathus fasciatus by Iridoviral Infection (이리도 바이러스 감염에 의한 양식 돌돔, Oplegnathus fasciatus의 대량폐사)

  • Sohn, Sang-Gyu;Choi, Dong-Lim;Do, Jeung-Wan;Hwang, Jee-Youn;Park, Jeong-Woo
    • Journal of fish pathology
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    • v.13 no.2
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    • pp.121-127
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    • 2000
  • From August to October 1998, over 60% mortality of cultured striped beakperch Oplegnathus fasciatus was occurred in net cages along the southern coast of Korea. Moribund fish showed some clinical signs of lethargic behavior, dark coloration or decoloration, severe gill anemia and enlargement of spleen. Also enlarged basophilic cells showing Feulgen -positive reaction were observed in the tissue section of spleen, kidney, liver and heart of the diseased fish. GF cells inoculated with spleen homogenate of diseased fish produced cytopathic effect of enlarged and rounded cells, therefore the causative virus was isolated from diseased fish. Striped beakperch fingerlings intraperitoneally inoculated with the causative virus ($10^4TCID_{50}$/0.1 ml) revealed symptoms similar to those of naturally infected fish and died from 7 to 14 days post injection. Transmission electron microscopy revealed that the causative virus was enveloped icosahedral particle with 120~130 nm in diameter. PCR products of the expected size (500 bp) were amplified with a primer set based on the ATPase gene of RSIV(red sea bream iridovirus) using template DNAs which were extracted from the spleen of diseased fish and GF cells inoculated with the causative virus. According to the analysis of nucleotide sequence of these PCR products, the sequence from ATPase cDNA gene of the causative virus showed 95% homology with that of RSIV. These results indicate that the mass mortality in the cultured striped beakperch was caused by the infection of iridovirus similar to RSIV.

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Statistical data on fish virus of cultured olive flounder, Paralichthys olivaceus from 2005 to 2007 (2005년부터 2007년 사이 양식 넙치, Paralichthys olivaceus를 대상으로 한 어류바이러스 검출에 대한 통계 자료)

  • Cho, Mi-Young;Park, Gyeong-Hyun;Ji, Bo-Young;Kim, Jin-Woo
    • Journal of fish pathology
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    • v.23 no.2
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    • pp.155-163
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    • 2010
  • The epidemiological study was performed to survey the prevalence of fish pathogens in cultured olive flounder, Paralichthys olivaceus from 2005 to 2007. In this study, the fish pathogens were detected from 1,528 among 2,238 fish samples collected yearly in 5 sites from February, May, August and November. Annual incidences for three years show a yearly increase and there were 60.6% in 2005, 66.7% in 2006 and 72.3% in 2007, respectively. Seasonal prevalence was 63.5% in February, 67.4% in May, 75.1% in August and 64.4% in November for three years. The detection rates of 6 viral pathogens were 35.6% in 2005, 44.6% in 2006 and 24.4% in 2007 and the peak rate was 55.4% at adult size group (above 41cm). Viral nervous necrosis virus (24.7%) has been the most predominant virus in this investigation, while much lower rates were noted in viral haemorrhagic septicemia virus (10.6%) and red sea bream iridovirus (0.9%).

Distribution and Molecular Phylogeny of the Toxic Benthic Dinoflagellate Ostreopsis sp. in the Coastal Waters off Jeju Island, Korea (춘계 제주 연안에서 유독 저서성 와편모류 Ostreopsis sp.의 분포와 분자계통학적 위치)

  • KIM, SUNJU;SEO, HYOJEONG
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.24 no.2
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    • pp.236-248
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    • 2019
  • We investigated occurrence and molecular phylogeny of the toxic epiphytic dinoflagellate Ostreopsis at seven sampling sites in the coastal waters off Jeju Island of Korea in April, 2017. During the sampling period, surface water temperature ranged from 15.7 to $18.3^{\circ}C$ and salinity was relatively constant, ranging from 33.4 to 34.9. Of a total of 13 macroalgal species collected from all sampling sites, Ostreopsis cells were observed from 8 macroalgal species and the highest cell abundance ($157.5cells\;g^{-1}$) was recorded on the red alga Grateloupia filicina at St. 6. LSU rDNA D8/D10 sequences of all Korean Ostreopsis strains isolated from the 4 sampling sites were 100% identical. Molecular phylogentic analyses (BI and ML) inferred from LSU rDNA alignment showed that the Korean Ostreopsis strains placed into the previously described the Ostreopsis sp. 1 clade, which contained strains isolated from the temperate coastal waters of Japan. The Korean Ostreopsis sp. 1 strain grew in a wide range of temperature ($10-30^{\circ}C$) and salinity (25-30), with its maximum growth rate of $0.49d^{-1}$ at $25^{\circ}C$ and salinity of 30, indicating that they can be tolerated in temperate areas.

Effects of Breed, Laying Age, and Egg Storage Period on the Vitality of Hatched Chicks in Korean Native Chickens (한국토종닭의 품종, 산란 연령 및 종란의 보관 기간이 병아리의 강건성에 미치는 영향)

  • Choi, Eun Sik;Sohn, Sea Hwan
    • Korean Journal of Poultry Science
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    • v.48 no.1
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    • pp.1-12
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    • 2021
  • We investigated the effects of breed, laying age, and egg storage period on the vitality of chicks using the Hwanggalsaek Jaeraejong, Korean Rhode Island Red, and Korean White Leghorn chicken breeds. Their eggs were collected during the early laying period (27~29 weeks) and late laying period (50~52 weeks) and were stored for 3 days, 7 days and 14 days. After the eggs hatched, the hatching time, production performance, and organ weight of chicks were investigated. IL-6 gene expression level and relative length of telomeres were analyzed to determine the physiological activity of the chicks. HSP gene expression level and heterophil to lymphocytes ratio were also analyzed to examine the degree of stress response in the chicks. The results showed that breed and laying age influenced the vitality of chicks, but the egg storage period did not. Korean Leghorn chicks were considered the weakest breed in terms of vitality owing to their low survival rate, small heart size, low physiological activity, and high stress response level. Although the survival rate of chicks produced in the early laying period was low, their high physiological activity and low stress response indicated that they had a high vitality than the chicks produced in the late laying period. In conclusion, to obtain chicks with high vitality, it would be desirable to select a high vitality breed and avoid the use of chicks produced in the late laying period.

Comparison of Telomere Length and Vitality among Korean Native Chicken Breeds (토종닭 품종 간 텔로미어 길이 및 생존율 비교 분석)

  • Cho, Eun Jung;Kim, Bo Gyeong;Sohn, Sea Hwan
    • Korean Journal of Poultry Science
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    • v.49 no.1
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    • pp.15-23
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    • 2022
  • We compared the degrees of vitality of 12 Korean native chicken breeds, such as Jaeraejong, Korean Rhode Island Red (Rhode), Korean White Leghorn, Korean Cornish (Cornish), and Korean Ogye breeds. The survival rate and telomere length were measured as vital markers. Telomere length was analyzed via quantitative fluorescence in situ hybridization method using the lymphocytes of 466 chickens. We found that the telomere length decreased linearly with increasing chronological age in all chicken breeds. Telomere length and telomere shortening rates (TSR) were significantly different among the chicken breeds after 20 weeks of age (P<0.01). Rhode had the longest telomere length and the lowest TSR, whereas Cornish had the shortest telomere length and the highest TSR. In terms of TSR, the telomere length of 50-week-old chickens was half of that of 8-week-old chickens. There was also a significant difference in survival rates among the breeds. Both Rhode and Korean Ogye had the highest survival rates, while Cornish had the lowest. There was a significant positive correlation between survival rate and telomere length, and telomere length in old age showed a higher correlation with survival rate than that in young age. Therefore, it is considered that TSR is more closely related to survival rate than the telomere length. Based on the telomere dynamics and survival rates of 12 Korean native chicken breeds, it was concluded that the Rhode breed and Cornish breed had the highest and lowest vitality, respectively.

The Water Quality in the Soho Coastal Seawaters of Gamak Bay Before and After a Typhoon (가막만 소호해역에서 태풍 전후 수질 변동특성)

  • Lee Young-Sik;Moon Seong-Yong
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.11 no.3
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    • pp.117-123
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    • 2006
  • The water quality before and after a typhoon was investigated as a part of a study on the increase of organic matter and on the fundamental measures to counter chemical oxygen demand (COD) in the eutrophic Soho coastal seawaters of Gamak Bay. The dissolved oxygen (DO) saturations were <54% when water column was stratified. The DO saturation was similar at surface and in the bottom layer after a typhoon $(78\sim88%)$, and a very high DO saturation (234%) was observed in the surface water after mass phytoplankton growth. The highest values of $NH_4-N,\;NO_3-N,\;PO_4-P$, and $SiO_2-Si$ were 18.22, 38.90, 1.58, and $52.10{\mu}M$, respectively, when freshwater entered after heavy rainfall events. In addition, high concentrations of $NH_4-N,\;PO_4-P$, and $SiO_2-Si$ were detected with low DO saturations in bottom water (>5m). A maximum chlorophyll (Chl.) concentration of $311.0{\mu}gl^{-1}$ was observed after typhoon, when a high-density Scrippsiella trochoidea red tide occurred with cell density of 42,000 cells $ml^{-1}$. The algal growth potential (AGP) was high after the typhoon. Nitrogen was always a limiting nutrient for phytoplankton growth. The highest COD level was $10.55mgl^{-1}$, and the main reason of the variation in COD was likely to be phytoplankton growth $(r^2=0.612,\;p=0.000)$. Organic matter, which entered the water column when the typhoon stirred the sediments, seems to have little effects on COD increase.

Alkaline Phosphatase Activity and Utilization of Dissolved Organic Phosphorus by Phytoplankton Isolated from Korean Coastal Waters (한국 연안역에서 분리한 식물플랑크톤의 alkaline phosphatase 활성과 용존태 유기인의 이용)

  • Oh, Seok-Jin;Kwon, Hyeong-Kyu;Yang, Han-Soeb
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.15 no.1
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    • pp.16-24
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    • 2010
  • Utilization of dissolved organic phosphorus (DOP) and alkaline phosphatase (APase) activity by Skeletonema costatum, Chaetoceros didymus, Alexandrium tamarense and Heterosigma akashiwo under the phosphorus deficient condition were examined in the laboratory. S. costatum, C. didymus, A. tamarense and H. akashiwo could make use of phosphomonoester and nucleotide compounds for the growth of them as a phosphorus source. APase activity of S. costatum, C. didymus, A. tamarense and H. akashiwo began to be activated at dissolved inorganic phosphorus (DIP) concentrations less than $0.30\;{\mu}M$, $0.33\;{\mu}M$, $2.04\;{\mu}M$ and $0.63\;{\mu}M$ respectively, and their maximum APase activity were $0.01\;pmol\;cell^{-1}\;hr^{-1}$, $0.11\;pmol\;cell^{-1}\;hr^{-1}$, $1.63\;pmol\;cell^{-1}\;hr^{-1}$ and $0.19\;pmol\;cell^{-1}\;hr^{-1}$, respectively. Although each phytoplankton species displayed different APase activity for DOP utilization, their maximum APase activities were higher than maximum phosphorus uptake rates, inferring that these species might be able to keep growing under DIP-limited conditions thought utilizing effectively the hydrolized product of DOP. This result also implies that utilization of DOP might contribute to not only the growth of red tide forming phytoplankton but also the interspecific competition among phytoplankton species in coastal environments.

Marine Algal Flora and Community Structure in Kijang on the Southern East Coast of Korea (부산시 기장군 연안의 해조상 및 군집 특성)

  • Choi, Chang-Geun;Chowdhury, M.T.H.;Choi, In-Young;Hong, Yong-Ki
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.15 no.3
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    • pp.133-139
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    • 2010
  • Marine algal flora and community structure were investigated at four sites in Kijang area on the southern east coast of Korea in August 2006 and August 2009, respectively. A total of 54 seaweeds including 6 green, 10 brown, 38 red were collected and identified. Of 54 seaweeds, 35 species were found throughout the survey period. Mean biomass in wet weight was from $616.0\;g\;m^{-2}$ to $1,462.4\;g\;m^{-2}$2 in 2006, and $354.8\;g\;m^{-2}$ to $965.6\;g\;m^{-2}$ in 2009. Maximum biomass was recorded at Mundong site, and minimum was recorded at Seoam (2006) and Dongbaek (2009) sites. The flora investigated (2006, 2009) could be classified into six functional groups such as coarsely branched form (58.7%, 58.1%), thick leathery form (10.9%, 11.6%), filamentous form (13.0%, 9.3%), crustose form (6.5%, 9.3%), sheet form (6.5%, 7.0%) and jointed calcareous form (4.3%, 4.7%) during survey period. The R/P, C/P and (R+C)/P values reflecting flora characteristics were 4.00, 0.75 and 4.75 at 2006, and 5.17, 1.00 and 6.17 at 2009, respectively. Therefore, the number of marine algae species and biomass in Kijang area were similar when they were comparing with the previous data. It suggest that any changes of seaweed diversity have not been observed in Kijang coastal area before and after the anthropogenic construction between 2006 and 2009.