• Journal of Korean Society of Forest Science
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• v.109 no.1
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• pp.23-30
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• 2020

The use of increased computing power, machine learning, and deep learning techniques have dramatically increased in various sectors. In particular, image detection algorithms are broadly used in forestry and remote sensing areas to identify forest types and tree species. However, in South Korea, machine learning has rarely, if ever, been applied in forestry image detection, especially to classify tree species. This study integrates the application of machine learning and forest image detection; specifically, we compared the ability of two machine learning data collection methods, namely image data captured by forest experts (D1) and web-crawling (D2), to automate the classification of five trees species. In addition, two methods of characterization to train/test the system were investigated. The results indicated a significant difference in classification accuracy between D1 and D2: the classification accuracy of D1 was higher than that of D2. In order to increase the classification accuracy of D2, additional data filtering techniques were required to reduce the noise of uncensored image data.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.44 no.2
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• pp.126-140
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• 2011

Genetic determinants of two metallothionein isoforms (MT-A and MT-B) were isolated and characterized from the perciform species, rockbream (Oplegnathus fasciatus). Rockbream MT-A and MT-B shared a high degree of homology at amino acid levels with representative orthologs from other perciform species, especially with respect to the conserved cysteine residues. At the genomic level, both MT-A and MT-B genes represent a tripartite structure typical of vertebrate MT genes. However, rockbream MT-B showed unusually large introns (1.2 kb and 0.8 kb for intron I and II, respectively), a phenomenon that has rarely been seen in other vertebrate MT genes. MT-A and MT-B transcripts were ubiquitously detected in a wide array of tissues, wherein brain and eye showed the highest basal expression levels, and the fin exhibited the lowest expression of both isoforms. The basal expression of MT-A in most tissues was significantly higher (ranging from 4- to 10-fold) than that of MT-B. Upon heavy metal exposures to Cd, Cu or Zn at 25 ppb for 48 h, MT-A and MT-B transcripts in the liver were significantly activated by Cd and moderately by Zn. On the other hand, exposure to Cu did not result in alterations of MT-A, nor in the significant suppression of MT-B. Following bacterial challenges with Escherichia coli, Edwardsiella tarda or Streptococcus iniae, MT isoforms in the liver, kidney and spleen were highly modulated and exhibited a pattern that was dependent on the bacterial species, tissues and isoforms. These results suggest that the two MT isoforms could be taken into account as potential indicators of metal toxicity and immune perturbations of this aquaculture-relevant species.

• Mycobiology
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• v.30 no.3
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• pp.146-153
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• 2002

Two types of mycorrhizae, orchid(OM) and arbuscular mycorrhizae(AM), were observed in the cortical cells of Botrychium ternatum roots. The vesicles or arbuscules of AM fungi were examined and the fresh or digestive pelotons by other species of basidiomycetes were also observed in the roots under light microscope. These symbioses were, as the genomic DNAs extracted from roots of B. ternatum reacted with the specific primers, confirmed with PCR technique, being added to more strong evidences. These discoveries were rarely happened in the roots, especially a fern in nature. OM was observed in the roots of B. ternatum collected from the nationwide areas, whereas AM was only in the roots of B. ternatum collected from Chung-Buk areas. It is speculated that OM are associated with the nitrogen cycle in Islands and the growth of B. ternatum in the inland of Central Korea is related to both the phosphate and nitrogen cycle in the nature. The results suggest that B. ternatum is a typical species with two types of mycorrhizae under various growing conditions.

• Childhood Kidney Diseases
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• v.10 no.2
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• pp.244-248
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• 2006

Shigella infection usually produces gastrointestinal symptoms but rarely causes urinary tract infection. A 7-year-old girl was admitted for fever, chills, right flank pain, and dysuria. She had no vomiting or diarrhea. There was mild tenderness in her right lower abdomen, and right CVA tenderness was also noted. Acute pyelonephritis was diagnosed by abdominal CT. She showed improvement with intravenous administration of antibiotics. The first urine culture grew $1{\times}10^5$ CFU/mL Shigella dysenteri. Although urinary tract infections due to Shigella species are extremely rare, Shigella species should be considered as a possible cause of pediatric urinary tract infection. We report the first case of urinary tract infection caused by S. dysenteri, which presented as acute pyelonephritis without gastrointestinal symptoms in a child.

• 한국균학회소식:학술대회논문집
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• 2009.10a
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• pp.76-95
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• 2009

In the fungal genus Cordyceps, the type species Cordyceps militaris produces bioactive ingredients and exhibits medicinal effects as a Traditional Chinese Medicine (TCM), The fruiting bodies of C.militaris have now been mass-produced artificially and used as functional food and medicine in China. The unstable variation in forming fruiting body is however a key restrictive factor in industrial production. The genetic study on in vitro stromata formation of C. militaris has rarely been carried out. Here, we report the effects of genetic variation including the mating system on perithecial stromata formation of C. militaris. Monoconidial isolates which have both MAT1-1-1 and MAT1-2-1(genotype MAT1-1/2) could produce stromata. While the isolates only have either MAT1-1-1 or MAT1-2-1 (genotype MAT1-1 or MAT1-2) failed to produce stromata. Despite obvious heterothallism, homothallism was occasionally observed in a few isolates of C. militaris. High genetic variation was observed amongst the different monoconidial isolates of C. militaris. The unstable variation or lose of fruiting body formation was found to be caused by the inner-species high genetic variation of C. militaris. These results also indicated that C. militaris sexually behaved as both heterothallic and homothallic and required two mating type compatible in the same culture in order to produce regular clubshaped perithecial stromata.

• Proceedings of the Botanical Society of Korea Conference
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• 1993.07a
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• pp.1-36
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• 1993

It is possible to regenerate plants from calli, single cells and protoplasts of numerous species via organogenasis or embryogenesis in cell and tissue culture systems. Also such regeneration of plants can directly occur from cells of explants. However certain plant species has not been yet provided cultures suitable for plant regeneration from cells or tissues. For example, we have to confirm the regenerability of plant from cells before preparing transformed cells for application. Even more, it is very important to notice that regenerated plants in cell and tissue cultures often show structural abnormality. The mojority of those plants is functionally disordered and eventually cases degenerated. One of such examples is vitreous plants which are manifested mainly in the leaves and manifesteds to a lesser extent in the stems and roots. Regenerants in suspension cultures show more frequent vitrification than on gelled media so that relative humidity and water potential are the key factors involved in abnormal morphogenesis in vitro. The other is that somatic embryos formed in media containing BAP or high concentration of sucrose show frequently cotyledon aberrancy such as polycotyledon and born type cotyledon. The embryos with aberrant cotyledon of Codonopsis lanceolata could not germinate or regenerate into plants in many cases. In contrast, the polycotyledon embryos of Aralia cordata germinated in higher percentage than two cotyledonary embryos, but horn type cotyledonary embryos rarely germinated. The major cause of poor germination is the abnormal development of plumule apex meristem.

• ALGAE
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• v.20 no.1
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• pp.1-13
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• 2005

The taxonomic status of three closely related species of the genus Sphacelaria, S. rigidula Kützing, S. fusca (Hudson) C.F Gray and S. didichotoma Saunders was reassessed on the basis of morphological observations from herbarium specimens and phylogenetic analysis of RUBISCO spacer sequences. Sphacelaria rigidula was characterized by having only 2-armed propagules and somewhat slender filaments. Culture experiments revealed that its propagules commonly formed secondary arms, even though they were rarely produced in the field. It is concluded that S. divaricata Montagne characterized by dichotomously branched arms in propagules shoud be synonymized with S. rigidula, based on propagule morphology and measurements. Sphacelaria fusca clearly be separated from S. rigidula by having 2-4 armed propagules. These morphological differences were highly supported by the differences in the RUBISCO spacer sequences. S. didichotoma resembles S. rigidula in having propagules with two dichotomously branched arms. However, it commonly produces the secondary arms in the field. Additionally, this species has shorter primary arms than S. rigidula. Phylogenetic analyses supported the distinction of S. didichotoma from S. rigidula. The northwestern Pacific plants, previously recorded as S. divaricata, were recognized as S. didichotoma.

• Journal of the korean society of oceanography
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• v.33 no.1-2
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• pp.8-17
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• 1998

Paleoceanographic history of the East Sea is reconstructed based on several environmental parameters (coarse fraction content, planktonic foraminifera/benthic foraminifera ratio, fragmentation and assemblages of planktonic foraminifera, and coiling ratio of Neogloboquadrina pa-chyderma, etc,) of the late Quaternary sediments obtained from the Ulleung Basin. N. pa-chydeyma and Globigerina bulloides are dominant species (greater than 90% in abundance)among the total planktonic foraminifera assemblages in the late Quaternary sediments. The benthic foraminifera rarely occurred throughout the cores. Sinistrally-coiled specimens of N. pa-chyderma representing cold water temperature are observed more abundantly than dextrally-coil-ed ones. In addition, the sinistrally-coiled N, pachydeyma showed more the amount at the lower part of the cores than at the upper part suggesting the restriction of the Tsushima Warm Current into the East Sea during glacial period. G. bulloides, a species representative of upwelling condition, shows more abundant occurrence in the sediments of Core 941013 than those of Core 941006. This implies that Core 941013 is more influenced by upwelling than Core 941006. The upper part of the two cores contain more fragmentation of planktonic foraminifera suggesting significant dissolution by corrosive bottom wafer. Ascending CCD also played an important role for the absence of planktonic foraminifera at the upper part of the cores.

• Journal of Forest and Environmental Science
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• v.32 no.2
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• pp.113-119
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• 2016

The long lived iteroparous conifers produce male and female gametophyte for hundreds of years once they reach the reproductive stage, however, the production of seed is not frequent. This phenomenon of infrequent seed production in conifers is yet to be understood. An attempt to study this change in cone production in Cedrus deodara of Western Himalayas -a species reported to be mainly monoecious and rarely dioecious has been made. The observations recorded on selected trees of flowering/fruiting stage for four years at four different locations have shown the species to be dioecious with higher percentage of female trees during good seed year but with no definite or predictable pattern of reproduction in the trees. A decline in production of female trees was witnessed at all but one location immediately year after reaching the maximum (good seed year). The phenomenon of seed production has been observed to be cyclic and site specific. A change in the sexual behavior of the trees from male to female or vice-versa, male or female turning monoecious or vegetative and vegetative coming to reproductive was unpredictable.

• Journal of Microbiology and Biotechnology
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• v.25 no.1
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• pp.1-10
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• 2015

The bacterial diversity of 10 marine sponges belonging to the species Cliona celata, an unidentified Cliona species, Haliclona cinerea, Halichondria okadai, Hymeniacidon sinapium, Lissodendoryx isodictyalis, Penares incrustans, Spirastrella abata, and Spirastrella panis collected from Jeju Island and Chuja Island was investigated using amplicon pyrosequencing of the 16S rRNA genes. The microbial diversity of these sponges has as of yet rarely or never been investigated. All sponges, except Cliona celata, Lissodendoryx isodictyalis, and Penares incrustans, showed simple bacterial diversity, in which one or two bacterial OTUs occupied more than 50% of the pyrosequencing reads and their OTU rank abundance curves saturated quickly. Most of the predominant OTUs belonged to Alpha-, Beta-, or Gammaproteobacteria. Some of the OTUs from the sponges with low diversity were distantly (88%~89%) or moderately (93%~97%) related to known sequences in the GenBank nucleotide database. Phylogenetic analysis showed that many of the representative sequences of the OTUs were related to the sequences originating from sponges and corals, and formed sponge-specific or -related clades. The marine sponges investigated herein harbored unexplored bacterial diversity, and further studies should be done to understand the microbes present in sponges.