• Title/Summary/Keyword: quantitative models

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3D-QSAR Analysis on the Antitrypanosomal Activity of Phenoxy, Phenylthio or Benzyloxy Group Substituted Quinolone Analogues (Phenoxy, Phenylthio 및 Benzyloxy-기가 치환된 Quinolone 유도체들의 항트리파노소마 활성에 대한 3D-QSAR 분석)

  • Myung, Pyung-Keun;Kang, Na-Na;Kim, Sang-Jin;Sung, Nack-Do
    • YAKHAK HOEJI
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    • v.54 no.4
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    • pp.288-294
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    • 2010
  • Three dimensional quantitative-structure relationships (3D-QSARs) models between structures of phenoxy, phenylthio or benzyloxy substituted quinolone analogues and their antitrypanosomal activity against Chagas disease (Trypanosoma cruzi) were derived and discussed quantitatively using comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) methods. The optimized CoMFA 1 model ($q^2$=0.528 and $r^2$=0.964) showed the best statistical results. According to the optimized CoMFA 1 model, the antitrypanosomal activities were dependent on the steric (60.0%) and electrostatic (36.2%) factors of quinolone derivatives. From the contour maps, it is predicted that the activity will be increased when sterically favored groups were located in $R_4$ and $R_5$ position and sterically disfavored groups were located in $R_2$ position. Also, the positively charged groups on $R_2$ would be able to increase the antitrypanosomal activities.

Development of Site Index Equation and Curves for Site Quality Assessment of Pinus caribea Monoculture Plantations in Southwestern Nigeria

  • Oyebade, Bukola Amoo;Osho, Johnson Sunday Ajose;Adesoye, Peter Oluremi
    • Journal of Forest and Environmental Science
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    • v.30 no.4
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    • pp.315-321
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    • 2014
  • Forest timber production potential of any site is oftentimes measured quantitatively by site index, which is defined as dominant height of a particular stand at a specified age. A site index was developed for estimating site quality of monoculture Pinus caribaea plantations in southwestern Nigeria using a base age of 25 years. Dominant height data were collected from 60 Temporary Sample Plots (TSPs) of $20{\times}20m$ in plantations of 15 to 37 years. Linear and non-linear models as been widely applied in quantitative forest measurements were fitted to dominant height-age data and the best site index equation is : $SI=Exp^{(InHd-23.495(A^{-2}-0.04)}$. The site index curves constructed for the three sites (Omo Forest Reserve - OFR (J4), Oluwa Forest Reserve - OLFR and Shasha Forest Reserve - SFR) across the southwestern Nigeria using the chosen equation revealed that a 15 year old Pinus caribaea in the study area attained average dominant heights of 25, 22 and 21 m in OFR (J4), OLFR and SFR respectively. The site index equation and curves proffer veritable insight into better silvicultural options and management practices for the future plantations suitable sites.

Experimental approach to evaluate software reliability in hardware-software integrated environment

  • Seo, Jeongil;Kang, Hyun Gook;Lee, Eun-Chan;Lee, Seung Jun
    • Nuclear Engineering and Technology
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    • v.52 no.7
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    • pp.1462-1470
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    • 2020
  • Reliability in safety-critical systems and equipment is of vital importance, so the probabilistic safety assessment (PSA) has been widely used for many years in the nuclear industry to address reliability in a quantitative manner. As many nuclear power plants (NPPs) become digitalized, evaluating the reliability of safety-critical software has become an emerging issue. Due to a lack of available methods, in many conventional PSA models only hardware reliability is addressed with the assumption that software reliability is perfect or very high compared to hardware reliability. This study focused on developing a new method of safety-critical software reliability quantification, derived from hardware-software integrated environment testing. Since the complexity of hardware and software interaction makes the possible number of test cases for exhaustive testing well beyond a practically achievable range, an importance-oriented testing method that assures the most efficient test coverage was developed. Application to the test of an actual NPP reactor protection system demonstrated the applicability of the developed method and provided insight into complex software-based system reliability.

Model development in freshwater ecology with a case study using evolutionary computation

  • Kim, Dong-Kyun;Jeong, Kwang-Seuk;McKay, Robert Ian (Bob);Chon, Tae-Soo;Kim, Hyun-Woo;Joo, Gea-Jae
    • Journal of Ecology and Environment
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    • v.33 no.4
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    • pp.275-288
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    • 2010
  • Ecological modeling faces some unique problems in dealing with complex environment-organism relationships, making it one of the toughest domains that might be encountered by a modeler. Newer technologies and ecosystem modeling paradigms have recently been proposed, all as part of a broader effort to reduce the uncertainty in models arising from qualitative and quantitative imperfections in the ecological data. In this paper, evolutionary computation modeling approaches are introduced and proposed as useful modeling tools for ecosystems. The results of our case study support the applicability of an algal predictive model constructed via genetic programming. In conclusion, we propose that evolutionary computation may constitute a powerful tool for the modeling of highly complex objects, such as river ecosystems.

Quantitative Lateral Drift Control of RC Tall Frameworks using Dynamic Displacement Sensitivity Analysis (동적 변위민감도 해석을 이용한 고층 RC 골조구조물의 정량적인 횡변위 제어 방안)

  • Lee, Han-Joo;Kim, Ho-Soo
    • Journal of Korean Association for Spatial Structures
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    • v.6 no.3 s.21
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    • pp.103-110
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    • 2006
  • This study presents a technique to control quantitatively lateral drift of RC tall frameworks subject to lateral loads. To this end, lateral drift constraints are established by introducing approximation concept that preserves the generality of the mathematical programming and can efficiently solve large scale problems. Also the relationships of sectional properties are established to reduce the number of design variables and resizing technique of member is developed under the 'constant-shape' assumption. Specifically, the methodology of dynamic displacement sensitivity analysis is developed to formulate the approximated lateral displacement constraints. Three types of 10 and 50 story RC framework models are considered to illustrate the features of dynamic stiffness-based optimal design technique proposed in this study.

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Formalizing the Design, Evaluation, and Analysis of Quality of Protection in Wireless Networks

  • Lim, Sun-Hee;Yun, Seung-Hwan;Lim, Jong-In;Yi, Ok-Yeon
    • Journal of Communications and Networks
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    • v.11 no.6
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    • pp.634-644
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    • 2009
  • A diversity of wireless networks, with rapidly evolving wireless technology, are currently in service. Due to their innate physical layer vulnerability, wireless networks require enhanced security components. WLAN, WiBro, and UMTS have defined proper security components that meet standard security requirements. Extensive research has been conducted to enhance the security of individual wireless platforms, and we now have meaningful results at hand. However, with the advent of ubiquitous service, new horizontal platform service models with vertical crosslayer security are expected to be proposed. Research on synchronized security service and interoperability in a heterogeneous environment must be conducted. In heterogeneous environments, to design the balanced security components, quantitative evaluation model of security policy in wireless networks is required. To design appropriate evaluation method of security policies in heterogeneous wireless networks, we formalize the security properties in wireless networks. As the benefit of security protocols is indicated by the quality of protection (QoP), we improve the QoP model and evaluate hybrid security policy in heterogeneous wireless networks by applying to the QoP model. Deriving relative indicators from the positive impact of security points, and using these indicators to quantify a total reward function, this paper will help to assure the appropriate benchmark for combined security components in wireless networks.

Circulating Plasma and Exosomal microRNAs as Indicators of Drug-Induced Organ Injury in Rodent Models

  • Cho, Young-Eun;Kim, Sang-Hyun;Lee, Byung-Heon;Baek, Moon-Chang
    • Biomolecules & Therapeutics
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    • v.25 no.4
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    • pp.367-373
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    • 2017
  • This study was performed to evaluate whether microRNAs (miRNAs) in circulating exosomes may serve as biomarkers of drug-induced liver, kidney, or muscle-injury. Quantitative PCR analyses were performed to measure the amounts of liver-specific miRNAs (miR-122, miR-192, and miR-155), kidney-specific miR-146a, or muscle-specific miR-206 in plasma and exosomes from mice treated with liver, kidney or muscle toxicants. The levels of liver-specific miRNAs in circulating plasma and exosomes were elevated in acetaminophen-induced liver injury and returned to basal levels by treatment with antioxidant N-acetyl-cysteine. Circulating miR-146a and miR-206 were increased in cisplatin-induced nephrotoxicity and bupivacaine-induced myotoxicity, respectively. Taken together, these results indicate that circulating plasma and exosomal miRNAs can be used as potential biomarkers specific for drug-induced liver, kidney or muscle injury.

An Optimal Restoration Method of Noncarious Cervical Lesions Using Three-Dimensional Finite Element Analysis (3차원 유한요소해석을 이용한 비우식성 치아의 수복 방법)

  • Woo, Sung-Gwan;Kim, Kwang-Hoon;Park, Jeong-Kil;Hur, Bock;Son, Kwon
    • Journal of the Korean Society for Precision Engineering
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    • v.24 no.7 s.196
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    • pp.112-119
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    • 2007
  • Cavities of Class V are caused by heavy occlusal loads due to bruxism and clenching habit. It is general to restore abfraction lesions with dental filler materials to reduce stress concentration. A material should be selected from various dental products based on long term clinical experiences or personal preference concerning filler methods. A quantitative criterion is necessary to make an evaluation of the results as dentists decide treatment methods and dental materials relying on their clinical experiences. The purpose of this study is to find an optimal restoration method and material for noncarious cervical lesions using the finite element method. An objective function was defined to minimize the sum of tensile and compressive stresses. Several models with different combinations of resins were suggested and compared in terms of the values of objective function. An optimal solution was to fill TetricFlow inside the lesion and Z100 in the remaining region with a thickness ratio of 0.125.

Hormone Replacement Therapy and Risk of Breast Cancer in Korean Women: A Quantitative Systematic Review

  • Bae, Jong-Myon;Kim, Eun Hee
    • Journal of Preventive Medicine and Public Health
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    • v.48 no.5
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    • pp.225-230
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    • 2015
  • Objectives: The epidemiological characteristics of breast cancer incidence by age group in Korean women are unique. This systematic review aimed to investigate the association between hormone replacement therapy (HRT) and breast cancer risk in Korean women. Methods: We searched electronic databases such as KoreaMed, KMbase, KISS, and RISS4U as well as PubMed for publications on Korean breast cancer patients. We also conducted manual searching based on references and citations in potential papers. All of the analytically epidemiologic studies that obtained individual data on HRT exposure and breast cancer occurrence in Korean women were selected. We restricted the inclusion of case-control studies to those that included age-matched controls. Estimates of summary odds ratio (SOR) with 95% confidence intervals (CIs) were calculated using random effect models. Results: One cohort and five case-control studies were finally selected. Based on the heterogeneity that existed among the six studies (I-squared=70.2%), a random effect model was applied. The summary effect size of HRT history from the six articles indicated no statistical significance in breast cancer risk (SOR, 0.983; 95% CI, 0.620 to 1.556). Conclusions: These facts support no significant effect of HRT history in the risk of breast cancer in Korean women. It is necessary to conduct a pooled analysis.

A Review of the Meta-Analysis in Library and Information Science (문헌정보학분야에서 메타분석 연구에 관한 고찰)

  • Ro, Jung-Soon
    • Journal of the Korean Society for Library and Information Science
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    • v.42 no.1
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    • pp.45-61
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    • 2008
  • Meta-analysis refers to the analysis of analysis. It is the statistical analysis of a large collection of analysis results from individual studies for the purpose of summarizing, integrating and interpreting the inconsistent findings. However, no meta-analysis study has been conducted in Library and Information Science in Korea. This Study introduced the characteristics, basic principles, analysis procesure, and major models of meta-analysis, reviewed meta-analysis studies in Library and Information Science, and discussed major problems in conducting meta-analysis in Library and Information Science especially in Korea.