• Title/Summary/Keyword: pncA

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Performance of active PNC Handover and PNC Heart Beat based Beacon Alignment Schemes for Wireless PAN Systems (WPAN에서의 신속한 망 복구를 위한 능동적인 PNC 핸드오버방법 및 PNC Heart Beat 의 비컨 프레임 정렬 방식의 성능분석)

  • Nam Hye-Jin;Kim Jae-Young;Jeon Young-Ae;Lee Hyung-Soo;Kim Se-Han;Yoon Chong-Ho
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.31 no.2B
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    • pp.117-128
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    • 2006
  • For the legacy IEEE 802.15.3 WPAN protocol, an unpredictable piconet coordinator(PNC) leaving from a piconet without a proper handoff procedure causes an absence of PNC, and thus the piconet gets collapsed. In addition, several beacons from PNCs in adjacent piconets may be collided on a device(DEV) located between those piconets. This beacon collision eventually makes the DEV leave from the piconet. To remedy these two problems, we here propose an Active Seamless Coordinator Switching(ASCS) scheme and a PNC HB based Beacon Alignment(PHBA) one. In the ASCS scheme, a PNC assigns a number of DEVs as next possible PNCs in sequence for provisioning against the abrupt breakdown of the current active PNC. Each nominated DEV proactively sends a probe frame to confirm the operation status of the active PNC. For the case of no response from the PNC, the nominated DEV tries to become a new PNC immediately. In the second PHBA scheme, each PNC is allow to broadcast a special Heart Beat(HB) frame randomly during a superframe period. When a DEV receives a HB frame from other PNC, it promptly sends the related PNCs a special Hiccup Beat(HCB) frame with the superframe information of its associated PNC. As a result, the HCB frame makes both PNCs align their superframe beginning time in order to yield no more beacon collisions. For these two proposed schemes, we show the performance by simulations. We can confirm the enhancement of throughput for each superframe and average frame transfer delay, since each scheme can reduce the duration of piconet collapse. Finally, it is worth while to note that the proposed schemes can be operated with frames those are permitted in the legacy WPAN standard.

Distributed PNC Election Scheme with Guaranteeing QoS in WPANs (WPAN에서 QoS를 보장하는 분산적인 PNC 선출 방법)

  • Jeong, Soon-Gyu;Yoo, Sang-Jo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.32 no.2B
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    • pp.133-142
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    • 2007
  • WPANs are formed in relatively small area and a PNC that serves as a central control device plays an important role in the operation and organization of a piconet. Typical applications of WPANs are security system and health monitoring system. In these type of systems, guaranteeing realtime service is very important, and communications cannot take place when the PNC malfunctions. Thus, in this situation, it is necessary to elect a new PNC as soon as possible. For this reason, we propose distributed PNC election scheme that considers not only QoS support but also network connectivity to avoid possible network partition. Simulation results show proposed mechanism can select PNC with guaranteeing QoS and connectivity for a limited period.

Accessibility Information Element & a PNC Selection Method in the High Rate WPAN (WPAN에서 통신가능성 정보 요소와 PNC 선택 방법)

  • Jeong, Heon-Ju;Cho, Moo-Ho
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.30 no.10B
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    • pp.639-647
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    • 2005
  • When a DEV associates with an existing WPAN, the PNC checks the capabilities of the new DEV to see if it is more capable to be the PNC of the piconet based on the criteria defined in the IEEE Std 802.15. If the new DEV is more capable and the current security policies allow it, then the PNC has the option of handing over control of the piconet to the DEV that has just joined. And, If the PNC is shutting down or wants to leave the WPAN, it also uses the handover process to give control to another DEV in the piconet. However, IEEE 802.15.3 checks only DEV capability information for more PNC capable. For PNC selection, it should consider the radio coverage of new PNC capable DEVs. So, we propose the method of PNC selection with accessibility check. This method manages PNC candidate list in the current piconet. In this paper, we analyze accessibility problems for PNC selection in section 2. In section 3, we explain CI(Configuration Inquiry) process which is proposed by Sony Corporation and propose PCI(PNC Candidate Inquiry) process. Also, we perform numerical analysis to compare PCI process with CI process in section 4. Finally, we conclude in section 5.

Identification of Enzymatic Catalysis of PncA using 1H-NMR

  • Yi, Jong-Jae;Kim, Won-Je;Rhee, Jin-Kyu;Lim, Jongsoo;Lee, Bong-Jin;Son, Woo Sung
    • Journal of the Korean Magnetic Resonance Society
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    • v.21 no.3
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    • pp.85-89
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    • 2017
  • Pyrazinamidase (PncA) from Mycobacterium tuberculosis is the hydrolytic enzyme (hydrolase) that can hydrolyze substrate PZA to active form pyrazoic acid (POA). To investigate hydrolytic reaction of M. tuberculosis PncA, 1D NMR spectra were monitored at various molar ratios of PncA and PZA. The line-width of PZA was changed as PncA was added into PZA with different molar ratios. These results suggested that determination of PncA enzymatic activity could potentially serve as an indirect measure of PZA susceptibility.

Detection of Pyrazinamide Resistance in Mycobacterium Tuberculosis by Sequencing of pncA Gene (pncA 유전자의 염기 서열 결정에 의한 결핵균의 Pyrazinamide 내성 진단)

  • Hwang, Jee-Yoon;Kwak, Kyung-Rok;Park, Hye-Kyung;Lee, Ji-Seok;Park, Sam-Seok;Kim, Yun-Seong;Lee, Jung-Yoo;Chang, Chul-Hun;Lee, Min-Ki;Park, Soon-Kew
    • Tuberculosis and Respiratory Diseases
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    • v.50 no.1
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    • pp.94-105
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    • 2001
  • Background : Examining the biological susceptibility of Mycobacterium tuberculosis to pyrazinamide (PZA) in vitro is very difficult as PZA is inactive under normal culture conditions. The biological susceptibility test, an enzyme assay for Pzase activity, and a genetic test for pncA gene mutations, were performed in order to predict PZA resistance. Methods : 28 cultured clinical isolates of Mycobacterium tuberculosis were tested. The biological susceptibility was performed by the absolute concentration method using Lowenstein-Jensen media. The PZase activity was tested by means of Wayne's method. A 710-bp region includes the entire open reading frame of pncA was amplified and sequenced. Results : All six strains with positive PZase activity exhibited no pncA mutations with one strain showing a false resistance in the biological susceptibility test. Among the 22 strains with no PZase activity, 21 exhibited showed pncA mutations. In the biological susceptibility test, 20 strains were resistant, and one was susceptible, and the other flied to test. The mutation types varied with ten missense, one silent and one nonsense mutation 1 slipped-strand mispairing, and 6 frameshift mutations. Three strains had an adenine to guanine mutation at position -11 upstream of the start codon. Conclusion : The mutation at the pncA promotor region is frequent at -11 upstream position. Automatic sequencing of pncA is a useful tool for rapid and accurate detection of PZA resistant M. tuberculosis, and for demonstrating the epidemiological relatedness of the PZA resistant M. tuberculosis strains.

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Purification, crystallization and X-ray crystallographic analysis of nicotinamidase Pnc1 from Kluyveromyces lactis

  • Kim, Shinae;Chang, Jeong Ho
    • Biodesign
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    • v.7 no.1
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    • pp.24-27
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    • 2019
  • Pnc1 converts nicotinamide to nicotinic acid to generate NAD+ through the Preiss-Handler pathway that is one of the NAD+-salvage pathway. By reducing levels of nicotinamide, an inhibitor of the NAD+-dependent histone deacetylase Sir2, yeast Pnc1 contributes gene silencing. In this study, to understand the structural features and molecular mechanism of nicotinamidase Pnc1, we overexpressed, purified, and crystallized the N-terminally His6-tagged Pnc1 protein from Kluyveromyces lactis and obtained X-ray diffraction data at a resolution of 2.2 Å. The crystals of the K. lactis Pnc1 (KlPnc1) belonged to space group P212121 with unit cell parameters a=38.5, b=77.3, c=83.3, and α=β=γ= 90°. There is one molecule in the asymmetric unit.

pncA Mutations in the Specimens from Extrapulmonary Tuberculosis

  • Lee, Jae-Chun;Yun, Yeo-Jun;Kqueen, Cheah-Yoke;Lee, Jong-Hoo;Kim, Hee-Youn;Kim, Young-Ree;Kook, Yoon-Hoh;Lee, Keun-Hwa
    • Tuberculosis and Respiratory Diseases
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    • v.72 no.6
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    • pp.475-480
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    • 2012
  • Background: Pyrazinamide (PZA) is an effective antitubercular drug that becomes toxic to Mycobacterium tuberculosis when converted to pyrazinoic acid by pyrazinamidase (PZase), encoded by mycobacterial pncA. A strong association was noted between the loss of PZase activity and PZA resistance. The causative organisms in extrapulmonary tuberculosis are rarely cultured and isolated. To detect pncA mutations in specimens from extrapulmonary tuberculosis as confirmative diagnosis of mycobacterial infection and alternative susceptibility test to PZA. Methods: Specimens were collected from clinically proven extrapulmonary tuberculosis. pncA was sequenced and compared with wild-type pncA. Results: pncA from 30 specimens from 23 donors were successfully amplified (56.6% in specimens, 59% in donors). Six mutations in pncA were detected (20.0% in amplified specimens, 26.1% in specimen donors) at nucleotide positions of 169, 248 and 419. The mutation at position 169 results in substitution of aspartic acid for histidine, a possible allelic variation of M. bovis that have intrinsic PZA resistance. The mutation at position 248 changes proline into arginine and that at position 419, arginine into histidine. Conclusion: DNA-based diagnosis using pncA may be simultaneously useful for the early diagnosis of mycobacterial infection and the rapid susceptibility to PZA in extrapulmonary tuberculosis. A potential implication of pncA allelic variation at 169 might be suggested as a rapid diagnostic test for M. bovis infection or Bacille Calmette-Gu$\acute{e}$rin (BCG) reactivation.

A Study on Electro-optical Characteristics of the Photoaligned VA-LCD on the Polynobornene Derivative Surface (Polynobornene 유도체 표면을 이용한 광배향 VA-LCD의 전기광학특성에 관한 연구)

  • 황정연;서대식;박경선;서동학;남상희
    • Journal of the Korean Institute of Electrical and Electronic Material Engineers
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    • v.15 no.3
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    • pp.253-257
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    • 2002
  • A new photoalignment material PNC, pole norbornene-2,3-dicarboxyolyl cholesterol, was synthesized and the electro-optical (EO) characteristics of the vortical-alignment (VA) liquid crystal display (LCD) photoaligned with UV exposure on the PNC surface were studied. EO characteristics of the photoaligned VA-LCD using a UV filter-less method was better than that of the UV filter method on the PNC surface for short UV exposure time. The response time of the photoaligned VA-LCD on the PNC surface without UV filter on the PNC surface is almost the same compared with the rubbing aligned VA-LCD.

A Practical Physical-Layer Network Coding for Fading Channels

  • Jung, Bang-Chul
    • Journal of information and communication convergence engineering
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    • v.8 no.6
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    • pp.655-659
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    • 2010
  • In the conventional PNC scheme, the relay node requires simultaneous transmission of two source nodes with strict power control and carrier-phase matching between two received symbols. However, this pre-equalization process at source nodes is not practical in fading channels. In this letter, we propose a novel physical-layer network coding (PNC) scheme with log-likelihood ratio (LLR) conversion for fading channels, which utilizes not pre-equalizer at transmitters (source nodes) but joint detector at receiver (relay node). The proposed PNC requires only channel side information at the receiver (CSIR), which is far more practical assumption in fading channels. In addition, the proposed PNC scheme can use the conventional modulation scheme like M-QAM regardless of modulation order, while the conventional PNC scheme requires reconfiguration of modulation scheme at the source nodes for detection of the received signal at relay node. We consider the combination of the proposed PNC and channel coding, and find that the proposed PNC scheme is easily combined the linear channel codes such as turbo codes, LDPC, and convolutional codes.

A Study on the Chemical Compsition and Hypocholesterolaemic Effect of Nostoc commune (돌해파리의 성분 및 혈청 콜레스테롤 저하작용에 관한 연구)

  • 강문선;임상선;이종호
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.26 no.3
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    • pp.468-474
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    • 1997
  • The chemical composition and hypocholoesterolaemic effect of Nostoc commune were studied. Proximate analysis data, composition of dietary fiber and oxalic acid-ammonium oxalate soluble substance of Nostoc commune were presented. Thirty rats were fed with the one of the following diet for three weeks: The control diet contained 0.75% cholesterol, 0.25% sodium cholate and 5% cellulose powder, CF was cholesterol free, PNC, ONC and RNC diet contained 7.2% powder, 2.2% extracts and 5% residue of Nostoc commune respectively. The lipid components of serum were assayed. The concentration of the total cholesterol was significantly lower in PNC, ONC than the control. The concentration of the total cholesterol was significantly lower in PNC, ONC than the control. The concentration of HDL-choloesterol was significantly higher in PNC than the control. The concentration of LDL, VLDL and chylomicron were comparatively lower in CF and PNC. The concentration of seum triglyceride and phospholipid was lower in PNC group than in the other group.

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