• Title/Summary/Keyword: pH-mapping

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Linkage Map and Quantitative Trait Loci(QTL) on Pig Chromosome 6 (돼지 염색체 6번의 연관지도 및 양적형질 유전자좌위 탐색)

  • Lee, H.Y.;Choi, B.H.;Kim, T.H.;Park, E.W.;Yoon, D.H.;Lee, H.K.;Jeon, G.J.;Cheong, I.C.;Hong, K.C.
    • Journal of Animal Science and Technology
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    • v.45 no.6
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    • pp.939-948
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    • 2003
  • The objective of this study was to identify the quantitative traits loci(QTL) for economically important traits such as growth, carcass and meat quality on pig chromosome 6. A three generation resource population was constructed from cross between Korean native boars and Landrace sows. A total of 240 F$_2$ animals were produced using intercross between 10 boars and 31 sows of F$_1$ animals. Phenotypic data including body weight at 3 weeks, backfat thickness, muscle pH, shear force and crude protein level were collected from F$_2$ animals. Animals including grandparents(F$_0$), parents(F$_1$) and offspring(F$_2$) were genotyped for 29 microsatellite markers and PCR-RFLP marker on chromosome 6. The linkage analysis was performed using CRI-MAP software version 2.4(Green et al., 1990) with FIXED option to obtain the map distances. The total length of SSC6 linkage map estimated in this study was 169.3cM. The average distance between adjacent markers was 6.05cM. For mapping of QTL, we used F$_2$ QTL Analysis Servlet of QTL express, a web-based QTL mapping tool(http://qtl.cap.ed.ac.uk). Five QTLs were detected at 5% chromosome-wide level for body weight of 3 weeks of age, shear force, meat pH at 24 hours after slaughtering, backfat thickness and crude protein level on SSC6.

PROJECTIONS OF ALGEBRAIC VARIETIES WITH ALMOST LINEAR PRESENTATION I

  • Ahn, Jeaman
    • Journal of the Chungcheong Mathematical Society
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    • v.32 no.1
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    • pp.15-21
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    • 2019
  • Let X be a reduced closed subscheme in ${\mathbb{P}}^n$ and $${\pi}_q:X{\rightarrow}Y={\pi}_q(X){\subset}{\mathbb{P}}^{n-1}$$ be an isomorphic projection from the center $q{\in}{\mathbb{P}}^n{\backslash}X$. Suppose that the minimal free presentation of $I_X$ is of the following form $$R(-3)^{{\beta}2,1}{\oplus}R(-4){\rightarrow}R(-2)^{{\beta}1,1}{\rightarrow}I_X{\rightarrow}0$$. In this paper, we prove that $H^1(I_X(k))=H^1(I_Y(k))$ for all $k{\geq}3$. This implies that Y is k-normal if and only if X is k-normal for $k{\geq}3$. Moreover, we also prove that reg(Y) ${\leq}$ max{reg(X), 4} and that $I_Y$ is generated by homogeneous polynomials of degree ${\leq}4$.

Diurnal Variation in Hydration of the Cervical Intervertebral Disc Assessed Using T2 Mapping of Magnetic Resonance Imaging

  • Chanyuan Liu;Jingyi Wang;Bowen Hou;Yitong Li;John N. Morelli;Peisen Zhang;Jun Ran;Xiaoming Li
    • Korean Journal of Radiology
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    • v.23 no.6
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    • pp.638-648
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    • 2022
  • Objective: The study aimed to investigate the diurnal variation in cervical disc hydration and its relationship with cervical degeneration. Materials and Methods: C3-C7 discs of 86 prospectively enrolled participants (37 males, 49 females; mean age ± standard deviation, 23.5 ± 2.5 years) were assessed using T2 mapping in the morning and evening. All discs were stratified by Miyazaki grade or C2-C7 Cobb angle and T2 values (T2). The degree of diurnal T2 variation (T2-DDV), defined as (morning T2 - evening T2)/morning T2 x 100%, was measured for the entire disc, annulus fibrosus (AF), nucleus pulposus (NP), and endplate zones. Results: T2 of the entire disc decreased significantly after the daytime load (p < 0.001), with a T2-DDV of 13.3% for all discs and 16.0%, 12.2%, and 13.0% for healthy (grade I), mild degenerative (grade II), and advanced degenerative (grade III/IV) discs, respectively. T2 of regional NPs and AFs decreased significantly from morning to evening (p ≤ 0.049) except in the healthy anterior inner AF (p = 0.092). Compared with healthy discs, mild degenerative discs displayed lower T2 and T2-DDV in regional NPs (p < 0.001). Advanced degenerative discs showed higher T2-DDV in the anterior inner AF compared with healthy discs (p = 0.050). Significant diurnal T2 changes in the endplate zones were observed only in healthy discs (p = 0.013). Cervical discs in the low Cobb angle group showed higher T2-DDV in the anterior AFs and anterior NP and lower T2-DDV in the posterior AF than those in the high Cobb angle group (p ≤ 0.041). Conclusion: This study characterized the diurnal variation in hydration of the cervical discs as assessed using T2 mapping and revealed early chemo-mechanical coupling dysfunction in degenerating discs. Cervical sagittal alignment on MRI can affect the diurnal stress patterns of the cervical discs. T2 mapping is sensitive to disc biomechanical dysfunction and offers translational potential from biomechanical research to clinical application.

Geophysical Surveys for Mapping of the AMD Contaminant Channels at an Abandoned Mine (폐광산의 AMD 오염영역탐지를 위한 지구물리탐사)

  • 김지수;최상훈;한수형
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2000.11a
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    • pp.258-261
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    • 2000
  • Geophysical surveys (electrical resistivity, self-potential, and magnetic methods) and streamwater sample analysis have been carried out at a site of tailings of waste deposits in an abandoned mine, Jangpoong, which is situated in Kowesan-Gun, Chungbuk-Do. The research was aimed at investigating the suitability of the various geophysical methods for detection of AMD (acid mine drainage) paths, and ultimately mapping of preferred AMD flow channels by incorporating the water sample analysis. Electrical resistivity section from the dipole-dipole line represents the low-resistivity zone trending northwest toward the stream nearby. The positions of the resistivity anomalies for AMD channels are well correlated to the ones from the various geophysical surveys. In addition they correspond to the sites of the higher peaks for the pH, EC, heavy metal content for the water sample data.

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RELAXED PROXIMAL POINT ALGORITHMS BASED ON A-AXIMAL RELAXED MONOTONICITY FRAMEWORKS WITH APPLICATIONS

  • Agarwal, Ravi P.;Verma, Ram U.
    • East Asian mathematical journal
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    • v.27 no.5
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    • pp.545-555
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    • 2011
  • Based on the A-maximal(m)-relaxed monotonicity frameworks, the approximation solvability of a general class of variational inclusion problems using the relaxed proximal point algorithm is explored, while generalizing most of the investigations, especially of Xu (2002) on strong convergence of modified version of the relaxed proximal point algorithm, Eckstein and Bertsekas (1992) on weak convergence using the relaxed proximal point algorithm to the context of the Douglas-Rachford splitting method, and Rockafellar (1976) on weak as well as strong convergence results on proximal point algorithms in real Hilbert space settings. Furthermore, the main result has been applied to the context of the H-maximal monotonicity frameworks for solving a general class of variational inclusion problems. It seems the obtained results can be used to generalize the Yosida approximation that, in turn, can be applied to first- order evolution inclusions, and can also be applied to Douglas-Rachford splitting methods for finding the zero of the sum of two A-maximal (m)-relaxed monotone mappings.

Petro-mineralogical and Solubility Characterization in Soluble Rocks (용해성 암석의 용식 진전에 대한 암석-광물학적 특성 연구)

  • 정의진;윤운상;여상진;김정환;이근병;노영욱
    • Proceedings of the Korean Geotechical Society Conference
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    • 2002.03a
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    • pp.253-260
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    • 2002
  • Chemical weathering processes related with mineralogical characters and ground water condition are very essential engineering problems in soluble rock masses. Detailed geological mapping were performed and 8 samples were collected from the 2 formations including various rock faces to deduce the possibility of the limestone cavity formation and their mechanism. Petrological descriptions and various petro-mineralogical experiments such as XRD analysis, clay mineral analysis, absorptivity test, impurity analysis were conducted to evaluate the cavity making processes. Laboratory solubility test for rock specimen were also carried out under the strong acid (pH=1) condition. From the experimental data and geological mapping data, it is found that the formation of limestone cavities in limestones are strongly related with geological structures such as beddings, cleavages and the contents of impurities rather than CaCO$_3$contents. In case of dolomites, rock textures, grain size, amounts and types of clay minerals as well as geological structures are major controlling factors of cavity forming processes

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The New Mass Estimator of Black Hole in Active Galaxies with Near Infrared Hydrogen Line

  • Kim, Do-Hyeong;Im, Myeong-Sin;Kim, Min-Jin
    • The Bulletin of The Korean Astronomical Society
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    • v.35 no.1
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    • pp.80-80
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    • 2010
  • About 50% of Active Galactic Nuclei(AGNs) are found to be red and dust-obscured. They are believed to be in an early dusty stage of AGNs evolution or affected by dust torus in the direction of line of sight. However, optical spectrum is affected by dust extinction, making it difficult to study their properties, such as FWHM and luminosity. In order to reveal the mass of central Black Hole(BH) in red AGN, we establish a new BH mass estimator for typical type1 AGNs using Near InfraRed(NIR) hydrogen line($P_{\alpha}$ and $P_{\beta}$), since these lines are at longer wavelength, less affected by dust extinction than optical hydrogen lines, such as $H_{\alpha}$ and $H_{\alpha}$. To derive the new empirical formula, we use a sample of well-known 36 AGN with a wide BH mass range of $10^6-10^9\;M_{\odot}$, where $M_{BH}s$ are estimated by reverberation mapping method and single epoch method. The $P_{\alpha}/P_{\beta}$ luminosities and FWHMs are derived by analyzing IRTF NIR spectra or taken from literature values. We show that luminosities and FWHMs of these lines correlate well with those of Balmer lines. Suggesting that Paschen and Balmer broad lines are originated from same region. Finally, we present the new $M_{BH}$ formula that are based on $P_{\alpha}/P_{\beta}$ luminosity and FWHM. We hope that our result will be used for investigating red AGNs.

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Dynamic Cardiac Magnetic Resonance Fingerprinting During Vasoactive Breathing Maneuvers: First Results

  • Luuk H.G.A. Hopman;Elizabeth Hillier;Yuchi Liu;Jesse Hamilton;Kady Fischer;Nicole Seiberlich;Matthias G. Friedrich
    • Journal of Cardiovascular Imaging
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    • v.31 no.2
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    • pp.71-82
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    • 2023
  • BACKGROUND: Cardiac magnetic resonance fingerprinting (cMRF) enables simultaneous mapping of myocardial T1 and T2 with very short acquisition times. Breathing maneuvers have been utilized as a vasoactive stress test to dynamically characterize myocardial tissue in vivo. We tested the feasibility of sequential, rapid cMRF acquisitions during breathing maneuvers to quantify myocardial T1 and T2 changes. METHODS: We measured T1 and T2 values using conventional T1 and T2-mapping techniques (modified look locker inversion [MOLLI] and T2-prepared balanced-steady state free precession), and a 15 heartbeat (15-hb) and rapid 5-hb cMRF sequence in a phantom and in 9 healthy volunteers. The cMRF5-hb sequence was also used to dynamically assess T1 and T2 changes over the course of a vasoactive combined breathing maneuver. RESULTS: In healthy volunteers, the mean myocardial T1 of the different mapping methodologies were: MOLLI 1,224 ± 81 ms, cMRF15-hb 1,359 ± 97 ms, and cMRF5-hb 1,357 ± 76 ms. The mean myocardial T2 measured with the conventional mapping technique was 41.7 ± 6.7 ms, while for cMRF15-hb 29.6 ± 5.8 ms and cMRF5-hb 30.5 ± 5.8 ms. T2 was reduced with vasoconstriction (post-hyperventilation compared to a baseline resting state) (30.15 ± 1.53 ms vs. 27.99 ± 2.07 ms, p = 0.02), while T1 did not change with hyperventilation. During the vasodilatory breath-hold, no significant change of myocardial T1 and T2 was observed. CONCLUSIONS: cMRF5-hb enables simultaneous mapping of myocardial T1 and T2, and may be used to track dynamic changes of myocardial T1 and T2 during vasoactive combined breathing maneuvers.

Purification and Characterization of Chitinase from a New Species Strain, Pseudomonas sp. TKU008

  • Wang, San-Lang;Lin, Bo-Shyun;Liang, Tzu-Wen;Wang, Chuan-Lu;Wu, Pei-Chen;Liu, Je-Ruei
    • Journal of Microbiology and Biotechnology
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    • v.20 no.6
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    • pp.1001-1005
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    • 2010
  • The chitinase-producing strain TKU008 was isolated from soil in Taiwan, and it was identified as a new species of Pseudomonas. The culture condition suitable for production of chitinase was found to be shaking at $30^{\circ}C$ for 4 days in 100 ml of medium containing 1% shrimp and crab shell powder, 0.1% $K_2HPO_4$, and 0.05% $MgSO_4{\cdot}7H_2O$ (pH 7). The TKU008 chitinase was suppressed by the simultaneously existing protease, which also showed the maximum activity at the fourth day of incubation. The molecular mass of the chitinase was estimated to be 40 kDa by SDS-PAGE. The optimum pH, optimum temperature, pH stability, and thermal stability of the chitinase were pH 7, $50^{\circ}C$, pH 6-7, and <$50^{\circ}C$, respectively. The chitinase was completely inhibited by $Mn^{2+}$ and $Cu^{2+}$. The results of peptide mass mapping showed that 11 tryptic peptides of the chitinase were identical to the chitinase CW from Bacillus cereus (GenBank Accession No. gi 45827175) with a 32% sequence coverage.

Mapping Quantitative Trait Loci for Meat Quality on Pig Chromosome 3, 4 and 7

  • Zuo, Bo;Xiong, YuanZhu;Su, YuHong;Deng, ChangYan;Zheng, Rong;Jiang, Siwen
    • Asian-Australasian Journal of Animal Sciences
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    • v.16 no.3
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    • pp.320-324
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    • 2003
  • The objective of this study was to localize QTL affecting meat quality in a pig family of three generations. All animals were genotyped for twenty-four microsatellites on SSC3 (Sus scrofa chromosome 3), SSC4 and SSC7. One hundred and forty $F_2$ offsprings were scored for eleven meat quality traits. Least square regression interval mapping revealed quantitative trait loci (QTL) effect for meat pH (m. Semipinalis Capitis, SC) on SSC4 and SSC7; for moisture (m. Longissimus Dorsi, LD) on SSC3. Furthermore, there was suggestive evidence for a QTL on SSC4 affecting intramuscular fat (IMF) content that nearly approached the chromosomewise (p=0.05) significance threshold.