• 제목/요약/키워드: order sequence

검색결과 2,192건 처리시간 0.043초

Converting Panax ginseng DNA and chemical fingerprints into two-dimensional barcode

  • Cai, Yong;Li, Peng;Li, Xi-Wen;Zhao, Jing;Chen, Hai;Yang, Qing;Hu, Hao
    • Journal of Ginseng Research
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    • 제41권3호
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    • pp.339-346
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    • 2017
  • Background: In this study, we investigated how to convert the Panax ginseng DNA sequence code and chemical fingerprints into a two-dimensional code. In order to improve the compression efficiency, GATC2Bytes and digital merger compression algorithms are proposed. Methods: HPLC chemical fingerprint data of 10 groups of P. ginseng from Northeast China and the internal transcribed spacer 2 (ITS2) sequence code as the DNA sequence code were ready for conversion. In order to convert such data into a two-dimensional code, the following six steps were performed: First, the chemical fingerprint characteristic data sets were obtained through the inflection filtering algorithm. Second, precompression processing of such data sets is undertaken. Third, precompression processing was undertaken with the P. ginseng DNA (ITS2) sequence codes. Fourth, the precompressed chemical fingerprint data and the DNA (ITS2) sequence code were combined in accordance with the set data format. Such combined data can be compressed by Zlib, an open source data compression algorithm. Finally, the compressed data generated a two-dimensional code called a quick response code (QR code). Results: Through the abovementioned converting process, it can be found that the number of bytes needed for storing P. ginseng chemical fingerprints and its DNA (ITS2) sequence code can be greatly reduced. After GTCA2Bytes algorithm processing, the ITS2 compression rate reaches 75% and the chemical fingerprint compression rate exceeds 99.65% via filtration and digital merger compression algorithm processing. Therefore, the overall compression ratio even exceeds 99.36%. The capacity of the formed QR code is around 0.5k, which can easily and successfully be read and identified by any smartphone. Conclusion: P. ginseng chemical fingerprints and its DNA (ITS2) sequence code can form a QR code after data processing, and therefore the QR code can be a perfect carrier of the authenticity and quality of P. ginseng information. This study provides a theoretical basis for the development of a quality traceability system of traditional Chinese medicine based on a two-dimensional code.

자기공명영상 왜곡에서 마스카라와 아이섀도의 영향 (Effects of the mascara and eye shadow on theMR image distortion)

  • 이현용;신운재;박병래
    • 대한방사선기술학회지:방사선기술과학
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    • 제28권1호
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    • pp.25-32
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    • 2005
  • 목 적 : 마스카라와 아이섀도가 자기공명영상 획득시 artifact를 어느 정도 일으키는가를 알아보고, pulse sequence에 따른 영상 왜곡의 차이를 비교하고자 한다. 대상 및 방법 : 실제 국내 여성들이 많이 사용 중인 3개 제조사의 제품 중 마스카라(M1, M2, M3)와 아이섀도(E1, E2, E3)를 선별하여 사용하였다. 자체 제작한 내경이 4 cm, 코일의 길이가 8 cm인 Tx/Rx 겸용의 quadrature type의 안장 코일을 사용하였다. 실험 1에서는 마스카라를 실험 2에서는 아이섀도를 실험 3에서는 마스카라에 아이섀도를 덧바른 후 영상을 획득하였다. Pulse sequence는 FSE(fast spin echo), SE(spin echo), GE(gradient echo)기법을 적용하였으며, 나타난 artifacts는 axial상에서 폭, sagittal상에서 길이를 각각 측정하였다. 각 sequence별로 측정된 영상왜곡 정도를 정량적 및 정성적으로 분석하였다. 결 과 : 마스카라와 아이섀도가 자기공명영상에서 부분적으로 artifact가 발생되어 영상왜곡을 유발하였다. Pulse sequence에 따른 artifact의 유발 정도도 다소 차이가 나타났다. 마스카라에 아이섀도를 덧바른 실험 3에서는 axial상에서 GE sequence에서 16.73 mm, SE에서 6.64 mm, FSE에서 6.19 mm의 폭으로 GE 기법에서 가장 많이 유발되었으며, SE, FSE 기법 순으로 높게 나타났다. sagittal상에서 GE sequence에서 22.84 mm, SE에서 18.15 mm, SE에서 17.81 mm의 길이로 GE 기법에서 가장 많이 유발되었으며, SE, FSE 기법 순으로 낮게 나타났다. 결 론 : 마스카라와 아이섀도로 화장한 여성의 뇌 및 안구 영상검사시 artifact가 영상진단에 영향을 미치는 것으로 판단된다. 뇌 및 안구 T2 강조영상을 얻고자 하는 경우는 pulse sequence를 GE보다 FSE 기법을 사용하는 것이 적합한 것으로 사료된다.

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Nonparametric Nonlinear Model Predictive Control

  • Kashiwagi, Hiroshi;Li, Yun
    • 제어로봇시스템학회:학술대회논문집
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    • 제어로봇시스템학회 2003년도 ICCAS
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    • pp.1443-1448
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    • 2003
  • Model Predictive Control (MPC) has recently found wide acceptance in industrial applications, but its potential has been much impounded by linear models due to the lack of a similarly accepted nonlinear modelling or data based technique. The authors have recently developed a new method for obtaining Volterra kernels of up to third order by use of pseudorandom M-sequence. By use of this method, nonparametric NMPC is derived in discrete-time using multi-dimensional convolution between plant data and Volterra kernel measurements. This approach is applied to an industrial polymerisation process using Volterra kernels of up to the third order. Results show that the nonparametric approach is very efficient and effective and considerably outperforms existing methods, while retaining the original data-based spirit and characteristics of linear MPC.

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전자내시경 순차영상을 이용한 위에서의 카메라 위치 추정 (Camera Position Estimation in Gaster Using Electroendoscopic Image Sequence)

  • 이상경;민병구
    • 대한의용생체공학회:학술대회논문집
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    • 대한의용생체공학회 1990년도 추계학술대회
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    • pp.33-37
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    • 1990
  • Endoscope system is the device that observe interior the body. It has some demerits because it use of optical fibers. The resolution of images depends on the number of optical fibers, it is impossible that several people observe at the same time and it needs special camera in order to record images. In order to overcome these demerits, electro endoscope system using CCD(Charge Coupled Device) has been developed recently. If the diameter of insertion tube is thinner, it is easier to be examined by thin endoscope system. At the present time, we develope these type of electro endoscope system in the department of SNU biomedical engineering. Moreover, we are researching an algorithm of the 3D-reconstruction of interior of the gaster. In this paper, a method for 3D information detection using electroendoscopic image sequence has been presented.

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The Complete Mitochondrial Genome of Dendronephthya gigantea (Anthozoa: Octocorallia: Nephtheidae)

  • Park, Eun-Ji;Kim, Bo-A;Won, Yong-Jin
    • Animal Systematics, Evolution and Diversity
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    • 제26권3호
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    • pp.197-201
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    • 2010
  • We sequenced the whole mitochondrial genome of Dendronephthya gigantea (Anthozoa: Octocorallia: Nephteidae), the first mitochondrial genome sequence report in the Family Nephtheidae. The mitochondrial genome of D. gigantea was 18,842 bp in length, and contained 14 protein coding genes (atp6 and 8, cox1-3, cytb, nd1-6 and 4L, and msh1), two ribosomal RNAs, and only one transfer RNA. The gene content and gene order is identical to other octocorals sequenced to date. The portion of the noncoding regions is slightly larger than the other octocorals (5.08% compared to average 3.98%). We expect that the information of gene content, gene order, codon usage, noncoding region and protein coding gene sequence could be used in the further analysis of anthozoan phylogeny.

Doubly-Selective Channel Estimation for OFDM Systems Using a Pilot-Embedded Training Scheme

  • Wang, Li-Dong;Lim, Dong-Min
    • Journal of electromagnetic engineering and science
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    • 제6권4호
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    • pp.203-208
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    • 2006
  • Channel estimation and data detection for OFDM systems over time- and frequency-selective channels are investigated. Relying on the complex exponential basis expansion channel model, a pilot-embedded channel estimation scheme with low computational complexity and spectral efficiency is proposed. A periodic pilot sequence is superimposed at a low power on information bearing sequence at the transmitter before modulation and transmission. The channel state information(CSI) can be estimated using the first-order statistics of the received data. In order to enhance the performance of channel estimation, we recover the transmitted data which can be exploited to estimate CSI iteratively. Simulation results show that the proposed method is suitable for doubly-selective channel estimation for the OFDM systems and the performance of the proposed method can be better than that of the Wiener filter method under some conditions. Through simulations, we also analyze the factors which can affect the system performances.

Isolation of Cysteine Protease Actinidin Gene from Chinese Wild Kiwifruit and its Expression in Escherichia coli

  • Lee, Nam-Keun;Hahm, Young-Tae
    • Food Science and Biotechnology
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    • 제16권2호
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    • pp.294-298
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    • 2007
  • The actinidin (EC 3.4.22. 14) found in kiwifruit is a cysteine protease. In order to obtain the actinidin gene from the Chinese wild kiwifruit, primers were designed on the basis of the actinidin gene of Actinidia deliciosa, the New Zealand kiwifruit. The 1.2 kb DNA fragment was acquired from the total RNAs of Chinese wild kiwifruit via reverse transcription polymerase chain reaction (RT-PCR), and its DNA sequence was analyzed. Its sequence was determined to share 98.4% homology with the actinidin gene of A. deliciosa. In order to verity the actinidin gene isolated from the Chinese wild kiwifruit in Escherichia coli, the mature gene was amplified via PCR and expressed in E. coli under the control of the T7lac promoter. The actinidin was expressed in E. coli as inclusion bodies, which were solubilized with urea and refolded. The protease activity of the refolded protein was approximately twice as high as that of E. coli BL2l (DE3).

Characteristics of Cow´s Voices in Time and Frequency domains for Recognition

  • Ikeda, Yoshio;Ishii, Y.
    • Agricultural and Biosystems Engineering
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    • 제2권1호
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    • pp.15-23
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    • 2001
  • On the assumption that the voices of the cows are produced by the linear prediction filter, we characterized the cows’voices. The order of this filter was determined by examining the voice characteristics both in time and frequency domains. The proposed order of the linear prediction filter is 15 for modeling voice production of the cow. The characteristics of the amplitude envelope of the voice signal was investigated by analyzing the sequence of the short time variance both in time and frequency domains, and the new parameters were defined. One of the coefficients o the linear prediction filter generating the voice signal, the fundamental frequency, the slope of the straight line regressed from the log-log spectra of the short time variance and the coefficients of the linear prediction filter generating the sequence of the short time variance of the voice signal can differentiate the two cows.

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Automated Test Generation from Specifications Based on Formal Description Techniques

  • Chin, Byoung-Moon;Choe, Young-Han;Kim, Sung-Un;Jung, Jae-Il
    • ETRI Journal
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    • 제19권4호
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    • pp.363-388
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    • 1997
  • This paper describes a research result on automatic generation of abstract test cases from formal specifications by applying many related algorithms and techniques such as the testing framework, rural Chinese postman tour and unique input output sequence concepts. In addition, an efficient algorithm for verifying the strong connectivity of the reference finite state machine and the concept of unique event sequence are explained. We made use of several techniques to from an integrated framework for abstract test case generation from LOTOS and SDL specifications. A prototype of the proposed framework has been built with special attention to real protocol in order to generate the executable test cases in an automatic way. The abstract test cases in tree and tabular combined notation (TTCN) language will be applied to the TTCN compiler in order to obtain the executable test cases which re relevant to the industrial application.

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A Novel Algorithm for Maintaining Packet Order in Two-Stage Switches

  • Zhang, Xiao Ning;Xu, Du;Li, Le Min
    • ETRI Journal
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    • 제27권4호
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    • pp.469-472
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    • 2005
  • To enhance the scalability of high performance packet switches, a two-stage load-balanced switch has recently been introduced, in which each stage uses a deterministic sequence of configurations. The switch is simple to make scalable and has been proven to provide 100% throughput. However, the load-balanced switch may mis-sequence the packets. In this paper, we propose an algorithm called full frame stuff (FFS), which maintains packet order in the two-stage load-balanced switch and has excellent switching performance. This algorithm is distributed and each port can operate independently.

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