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Molecular and Biochemical Characterization of a Novel Xylanase from Massilia sp. RBM26 Isolated from the Feces of Rhinopithecus bieti

  • Xu, Bo;Dai, Liming;Li, Junjun;Deng, Meng;Miao, Huabiao;Zhou, Junpei;Mu, Yuelin;Wu, Qian;Tang, Xianghua;Yang, Yunjuan;Ding, Junmei;Han, Nanyu;Huang, Zunxi
    • Journal of Microbiology and Biotechnology
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    • v.26 no.1
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    • pp.9-19
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    • 2016
  • Xylanases sourced from different bacteria have significantly different enzymatic properties. Therefore, studying xylanases from different bacteria is important to their applications in different fields. A potential xylanase degradation gene in Massilia was recently discovered through genomic sequencing. However, its xylanase activity remains unexplored. This paper is the first to report a xylanase (XynRBM26) belonging to the glycosyl hydrolase family (GH10) from the genus Massilia. The gene encodes a 383-residue polypeptide (XynRBM26) with the highest identity of 62% with the endoxylanase from uncultured bacterium BLR13. The XynRBM26 expressed in Escherichia coli BL21 is a monomer with a molecular mass of 45.0 kDa. According to enzymatic characteristic analysis, pH 5.5 is the most appropriate for XynRBM26, which could maintain more than 90% activity between pH 5.0 and 8.0. Moreover, XynRBM26 is stable at 37℃ and could maintain at least 96% activity after being placed at 37℃ for 1 h. This paper is the first to report that GH10 xylanase in an animal gastrointestinal tract (GIT) has salt tolerance, which could maintain 86% activity in 5 M NaCl. Under the optimum conditions, Km, Vmax, and kcat of XynRBM26 to beechwood xylan are 9.49 mg/ml, 65.79 μmol/min/mg, and 47.34 /sec, respectively. Considering that XynRBM26 comes from an animal GIT, this xylanase has potential application in feedstuff. Moreover, XynRBM26 is applicable to high-salt food and seafood processing, as well as other high-salt environmental biotechnological fields, because of its high catalytic activity in high-concentration NaCl.

Selecting probability distribution of event mean concentrations from paddy fields (논으로부터 배출되는 유량가중평균 수질농도의 적정 확률분포 선정)

  • Jung, Jaewoon;Choi, Dongho;Yoon, Kwangsik
    • Journal of Environmental Impact Assessment
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    • v.23 no.4
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    • pp.285-295
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    • 2014
  • In this study, we analyzed probability distribution of EMCs (Event Mean Concentration) of COD, TOC, T-N, T-P and SS from rice paddy fields and compared the mean values of observed EMCs and the median values of estimated EMCs ($EMC_{50}$) through probability distribution. The field monitoring was conducted during a period of four crop-years (from May 1, 2008, to September 30. 2011) in a rice cultivation area located in Emda-myun, Hampyeong gun, Jeollanam-do, Korea. Four probability distributions such as Normal, Log-normal, Gamma, and Weibull distribution were used to fit values of EMCs from rice paddy fields. Our results showed that the applicable probability distributions were Normal, Log-normal, and Gamma distribution for COD, and Normal, Log- Normal, Gamma and Weibull distribution for T-N, and Log-normal, Gamma and Weibull distribution for T-P and TOC, and Log-normal and Gamma distribution for SS. Log-normal and Gamma distributions were acceptable for EMCs of all water quality constituents(COD, TOC, T-N, T-P and SS). Meanwhile, mean value of observed COD was similar to median value estimated by the gamma distribution, and TOC, T-N, T-P, and SS were similar to median value estimated by log-normal distribution, respectively.

Effects of Water Extracts of Persimmon Leaves to Cadmium Toxicity in Rats by Inhalation Exposure (시엽 추출물이 카드뮴에 흡입폭로된 랫드의 독성에 미치는 영향)

  • Kang Sung Ho;Chun Byung Yeol;Kim Sang Duck;Song Young Son;Lee Ki Nam;Jeung Jae Yeal
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.16 no.1
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    • pp.78-88
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    • 2002
  • Experimental animals were divided into 5 groups; normal, cadmium control, and 3 experimental groups. Cadmium control and experimental groups were exposed to 1 mg/㎥ of cadmium aerosol in air by inhalation exposure for 6 hours/day, 5 days/week during 4 weeks. Dosages of 20, 40, and 80mg/kg of extracts of persimmon leaves were intraperitoneally injected to experimental groups respectively and several toxicological parameters and induction of metallothionein were measured from the rats that inhaled cadmium aerosol in air. The results of this study were as follows. Cadmium concentration that cadmium control and experimental groups were inhaled was 0.980±0.061 mg/㎥. Mass median diameter of cadmium aerosol for inhalation exposure was 4.93±0.483㎛. Cadmium content of normal group in lung was 0.088㎍/g and the highest cadmium content in lung, 55.492㎍/g was from 80mg/kg dose group. Cadmium concentration of normal group in blood was 0.348㎍/100㎖ and the highest cadmium concentration in blood, 2.642㎍/100㎖ was from cadmium control. Cadmium concentration of normal group in liver was 0.010㎍/g and the highest cadmium concentration in liver, 31.100㎍/g was from 20mg/kg dose group. Cadmium concentration of normal group in kidney was 0.030㎍/g and the highest cadmium concentration in kidney, 2.526㎍/g was from cadmium control. Cadmium concentration of normal group in intestine was O.064㎍/g and the highest cadmium concentration in intestine, 0.300㎍/g was from 80mg/kg dose group. The highest cadmium concentration in urine by week was 6.080㎍/day from 20mg/kg dose group in the fouth week and the highest cadmium concentration in feces by week was 341.731㎍/day from 20mg/kg dose group in the fouth week. Metallothionein concentration of normal group in lung was 5.769㎍/g and the highest in lung, 30.986㎍/g was from 80mg/kg dose group. Metallothionein concentration of normal group in liver was 38.856㎍/g and the highest in liver, 169.378㎍/g was from 40mg/kg dose group. Metallothionein concentration of normal group in kidney was 22.228㎍/g and the highest in kidney, 47.898㎍/g was from 80mg/kg dose group. Metallothionein concentration of normal group in intestine was 2.170㎍/g and the highest in intestine, 13.642㎍/g was from 80mg dose group.

Possible Epithelial Ovarian Cancer Association with HPV18 or HPV33 Infection

  • Zhang, Pei-Pei;Zhou, Lei;Cao, Jia-Shi;Li, Yi-Ping;Zeng, Zhi;Sun, Ni;Shen, Li;Zhu, Hao-Yue;Ruan, Yang;Zha, Wen-Ting;Wang, Xin-Yu;Zhang, Ke-Qiang;Zhang, Ran
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.6
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    • pp.2959-2964
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    • 2016
  • The present study was conducted to investigate the prevalence of HPV infection in epithelial ovarian cancer (EOC) in Hunan province. DNA samples were collected from paraffin embedded ovarian tissue from 322 patients with EOC, 99 with ovarian benign tumors and 199 normal persons. The polymerase chain reaction and direct sequencing were used to identify the HPV types in the samples. The relationship between the infection of human papillomavirus (HPV) and the epithelial ovarian carcinoma (EOC) was investigated combined with clinical data. The prevalence of HPV18 and HPV33 in EOC group and benign group was higher than in the normal group. HPV18 and HPV33 may play a role in the development of both EOC and ovarian benign tumor and may participate in the development of EOC with traditional risk factors, family history and abortion, possibly exerting synergistic effects.

Randomized, Double-Blind Study of Efficacy and Safety of Gynostemma pentaphyllum Ethanol Extract in a Normal Population (정상인에서 스트레스와 불안에 대한 돌외추출물의 효과와 안전성에 관한 무작위 배정 이중 맹검 임상시험)

  • Jeong, Seong-Hae;Lee, Myung-Koo;Park, Mi-Sook;Kim, Jae-Moon
    • Korean Journal of Clinical Pharmacy
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    • v.21 no.2
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    • pp.131-137
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    • 2011
  • The purpose of this study was to evaluate the clinical efficacy of a standardized special ethanol extract from Gynostemma pentaphyllum as a management for anxiety and stress of normal population. This is a two-arm, parallelgroup, randomized, double blind clinical trial comparing Gynostemma pentaphyllum extract 200 mg bid (GP-EX, n=48) or placebo bid (n=54). The main outcome measures were the decrease in anxiety sensitivity index (ASI), the State version (S-STAI) of the Stait-Trait Anxiety Inventory (STAI) and the Trait version (T-STAT) of the STAI from baseline over a 6 weeks treatment period. In more anxious group (S-STAI50 or ASI19), the anxiety in group with GP-EX was decreased significantly than one in normal population with placebo [S-STAI50: T-STAI = from $57.7{\pm}6.5$ ($mean{\pm}S.D.$) to $46.8{\pm}11.2$ in normal population with GP-EX, p=0.002 vs. from $54.1{\pm}9.9$ to $49.0{\pm}9.6$ in normal population with placebo, p>0.05; ASI19: T-STAI = from $47.2{\pm}12.0$ to $42.4{\pm}11.1$ in normal population with GP-EX, p=0.022 vs. from $48.7{\pm}11.5$ to $46.0{\pm}10.4$ in normal population with placebo, p>0.05]. The most frequently reported adverse reactions considered possibly related to treatment were mild gastrointestinal events. GP-EX is more effective than placebo and is well tolerated as a therapy for anxiety and stress of normal population.

Effect of Hydrocortisone on Thymus Cells (Hydrocortisone 이 흉선세포(胸線細胞)에 미치는 영향(影響))

  • Ha, Tai-You
    • The Journal of the Korean Society for Microbiology
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    • v.9 no.1
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    • pp.41-45
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    • 1974
  • On day 2 after treatment of Lewis rat with 25mg of hydrocortisone, the cell number in the thymus was reduced to less than 10% of the matched control. By day 12 after hydrocortisone treatment the thymic cell population was recovered almost its original value and on day 24 after treatment the number of thymocytes was equivalent to that of normal thymocytes. The density distribution profile of hydrocortisone treated rats as compared with normal rats showed a marked decrease in the denser fraction D while the lighter fractions. (A plus B, and C) showed a considerable proportional increase. The proportion of dead cells in thymus suspension from hydrocortisone treated rats was higher than that from their normal counterparts. On separation, the dead cells accumulated selectively in the pellet and A fraction. The response of the thymocytes from hydrocortisone treated rats to PHA was increased compared to that from normal rats. Among the subpopulations, D fraction, which was relatively unresponsive in normal rats, showed a marked increase in PHA response and C fraction showed some increase in the response.

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A ROENTGENOCEPHALOMETRIC DESCRIPTION OF CLASS I MALOCCLUSION (1급부정교합(一級不正咬合)에 관(關)한 두부방사선계측학적(頭部放射線計測學的) 연구(硏究))

  • Whang, Sun-moon
    • The korean journal of orthodontics
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    • v.9 no.1
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    • pp.105-110
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    • 1979
  • In order to define what the average Class I malocclusion looks like, 72 Class I malocclusions were compared with corresponding measurements from 90 cases of normal occlusion sample. This sample was obtained from the Department of Orthodontics, Infirmary of Seoul National University. 1. SNA, Fac(NP) to SN measurements were significantly different from the normal occlusions and smaller than the normal occlusion means. 2. 'Y' axis to SN, Mandibular plane to SN, $\underline{1}$ to Occlusal plane, $\bar{1}$ to NB(linear) measurements were significantly different from the normal occlusions and larger than the normal occlusions. 3. ANB, Occlusal plane to SN, AB to Occlusal plane, $\underline{1}$ to SN, $\bar{1}$ to SN, $\bar{1}$ to Occlusal plane measurements showed no significant difference between the means.

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Brain-stem Auditory Evoked Responses as a Diagnostic tool for Deafness in Dogs (개에서 Brain-stem Auditory Evoked Responses를 이용한 Deafness 진단)

  • 윤영심;연성찬;권오경;남치주
    • Journal of Veterinary Clinics
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    • v.15 no.2
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    • pp.410-416
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    • 1998
  • These experiments were designed to evaluate the possibility of brain-stem auditory evoked responses(BAER) as a diagnostic tool for deafness in dogs. The BAER was recorded from three different groups of dogs; the normal dogs,'dog with otitis externa and dogs with unilateral destruction of cochlear. BAER of the normal dogs was consisted of distinct five peaks(I, II, III-IV, V). Furthermore, the clear shapes of waveform were observed at 85 dB. The latency of BAER was increased with reducing the intensity of sound-stimulus. The highest threshold of BAER was measured at 2 KHz with 10-30 dB. Dog with otitis externs demonstrated unclear shapes of BAER compared to the that of normal dogs. In the dogs with unilateral destruction of cochlear, the flat and indistinct waveform of BAER was recorded from the cochlear destroyed ear while that of BAER from normal side of ears did not show any differences from the normal BAER. These results indicate that the BAER can be clinically used in order to diagnose the deafness in dogs.

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Evaluation of Offshore Seawater Qualify using Gametes and Embryos of Starfishes (Asterina pectinifera) (불가사리 알을 이용한 연안해수의 수질 평가)

  • Yu Chun Man;Lee Jong Bin;Park Jong Cheon;Joo Hyun Soo
    • Korean Journal of Environmental Biology
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    • v.22 no.3
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    • pp.376-380
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    • 2004
  • In August 2003, the water quality of offshore waters along the Incheon coast of Korea was evaluated by biological evaluation using gametes, embryos and early development systems of a starfish species (Asterina pectinifera). As the result of performing biological evaluations on seawater samples from a total thirteen sites, the formation rate of normal larva was 16-68%. At seawater sample from site 5 and 13, formation rate of normal larva averaged 16%, the most abnormal rate hindering the early embryo development of the experimental animal, while that of site 3 averaged 68%, the highest formation rate of normal larva. At seawater sample from site 2, 4, 7, 9, 10, 11, 12, formation rate of normal larva averaged 33-54%, those which damage the development of early embryos slightly. At seawater sample from site 1, 5, 6, 8, 13, formation rate of normal larva averaged 16-28%, those which damage the development of early embryos strongly.