• Title/Summary/Keyword: non-marker

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Marker-Assisted Mating Applied in In-Situ Conservation of Indigenous Animals in Small Populations : (1) Choosing Mating Schemes for Maximum Heterozygosity

  • Wu, X.L.;Liu, R.Z.;Shi, Q.S.;Liu, X.C.;Li, X.;Wu, M.S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.13 no.4
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    • pp.431-434
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    • 2000
  • Maintaining maximum genetic variability is of critical importance with in-situ conservation of animal species in small populations. Marker-assisted mating (MAM) was suggested to achieve maximum heterozygosity in offspring populations. The aims of this research was to investigate and decide the effectiveness and promising types of MAM to achieve this goal. Analysis of variance with simulation data revealed that the heterozygosity in offspring populations was significantly determined by sire heterozygosity from mating of non-inbred parent animals, and significantly by sire heterozygosity and percent parental difference in offspring reproduced by inbred parents. Seven types of marker-assisted mating schemes were examined, in which offspring exhibited heterozygosity that was -0.01 to 7.37% below or above that from random mating of non-inbred parent animals, and 0.00 to 16.39% above that from random mating of inbred parent animals. The great increase in offspring heterozygosity was observed with mating by tandem maximizing sire heterozygosity, percent parental difference, and dam heterozygosity. Random mating resulted in fluctuation of offspring heterozygosity. These results suggested that MAM was a promising method for maintaining maximum offspring variability in in-situ conservation of animal species in small populations.

Principal methods to produce marker-free GM plants (무선발표지 형질전환 식물체 제조기술)

  • Woo, Hee-Jong;Shin, Kong-Sik;Lee, Ki-Jong;Kweon, Soon-Jong;Cho, Yong-Gu;Suh, Seok-Cheol
    • Journal of Plant Biotechnology
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    • v.37 no.2
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    • pp.212-219
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    • 2010
  • Selectable marker gene systems are vital for the development of transgenic plants, but the presence of selectable marker genes encoding antibiotic or herbicide resistance in genetically modified plants poses a number of problems. A lot of research results and various techniques have been developed to produce marker-free GM plants. The aim of this review is to describe the principal methods used for eliminating selectable marker genes to generate marker-free GM plants, concentrating on the three significant methods(co-transformation, site-specific recombinase-mediated excision, non-selected transformation) in several marker-free techniques.

Feasibility of Serum Pentosidine Level as a Potential Risk Factor for Osteoporotic Vertebral Compression Fracture

  • Choi, Dong-Hyuk;Lee, Sang-Min;Lim, Sung-An;Choi, Yong-Soo
    • Asian Spine Journal
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    • v.12 no.6
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    • pp.992-997
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    • 2018
  • Study Design: Feasibility study. Purpose: To evaluate the feasibility of using serum pentosidine level as a potential marker for osteoporotic vertebral compression fracture (OVCF). Overview of Literature: A review of previous studies suggests a negative correlation between serum pentosidine concentration and bone strength. However, it is unclear whether serum pentosidine level might be a potential marker of OVCF in Koreans. Methods: Forty patients who underwent bone mineral density examination were included in this study, and their serum pentosidine levels were prospectively analyzed. Serum pentosidine level was evaluated using enzyme-linked immunosorbent assay. Among all the patients, 11 with OVCF were assigned to the vertebral fracture group and 29 who did not have vertebral fracture were included in the non-fracture group. In addition, we used the Fracture Risk Assessment (FRAX) tool Korean version for assessing the 10-year probability of fracture. Results: There was a statistically significant difference in the mean serum pentosidine level (p=0.04) of the vertebral fracture group (110.8 ng/mL) and the non-fracture group (64.3 ng/mL). Logistic regression analyses showed that serum pentosidine was significantly associated with OVCF. The vertebral fracture group had significantly higher 10-year probability of major osteoporotic fracture as per FRAX than the non-fracture group. There was a positive correlation between pentosidine level and FRAX results (r=0.35, p=0.02). Conclusions: These results suggest that increased serum pentosidine level could be a potential marker for OVCF.

Enhancement of the Correctness of Marker Detection and Marker Recognition based on Artificial Neural Network (인공신경망을 이용한 마커 검출 및 인식의 정확도 개선)

  • Kang, Sun-Kyung;Kim, Young-Un;So, In-Mi;Jung, Sung-Tae
    • Journal of the Korea Society of Computer and Information
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    • v.13 no.1
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    • pp.89-97
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    • 2008
  • In this paper, we present a method for the enhancement of marker detection correctness and marker recognition speed by using artificial neural network. Contours of objects are extracted from the input image. They are approximated to a list of line segments. Quadrangles are found with the geometrical features of the approximated line segments. They are normalized into exact squares by using the warping technique and scale transformation. Feature vectors are extracted from the square image by using principal component analysis. Artincial neural network is used to checks if the square image is a marker image or a non-marker image. After that, the type of marker is recognized by using an artificial neural network. Experimental results show that the proposed method enhances the correctness of the marker detection and recognition.

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Evaluation of BCL-6, CD10, CD138 and MUM-1 Expression in Diffuse Large B-Cell Lymphoma patients: CD138 is a Marker of Poor Prognosis

  • Bodoor, Khaldon;Matalka, Ismail;Hayajneh, Rami;Haddad, Yazan;Gharaibeh, Waleed
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.7
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    • pp.3037-3046
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    • 2012
  • The diffuse large B-cell lymphoma (DLBCL) encompasses two major groups of tumors with uneven survival outcomes - germinal center B-cell (GCB) and non-germinal center B-cell (non-GCB). In the present study, we investigated the expression of GCB markers (BCL-6 and CD10) and non-GCB markers (CD138 and MUM-1) in an effort to evaluate their prognostic value. Paraffin-embedded tumor biopsies of 46 Jordanian DLBCL patients were analyzed, retrospectively, by immunohistochemistry to investigate the expression of BCL-6, CD10, CD138 and MUM-1. In addition, survival curves were calculated with reference to marker expression, age, sex and nodal involvement. Positive expression of BCL-6, CD10, CD138 and MUM-1 was shown in 78%, 61%, 39% and 91% of the cases, respectively, that of BCL-6 being associated with better overall survival (p = 0.02), whereas positive CD138 was linked with poor overall survival (p = 0.01). The expression of CD10 and MUM-1 had no impact on the overall survival. Among the clinical characteristics studied, diagnosis at an early age, nodal involvement and maleness were associated with a higher overall survival for DLBCL patients. Our results underline the importance of BCL-6 as a marker of better prognosis and CD138 as a marker of poor prognosis for DLBCL patients.

Tangible AR interaction based on fingertip touch using small-sized non-square markers

  • Park, Hyungjun;Jung, Ho-Kyun;Park, Sang-Jin
    • Journal of Computational Design and Engineering
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    • v.1 no.4
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    • pp.289-297
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    • 2014
  • Although big-sized markers are good for accurate marker recognition and tracking, they are easily occluded by other objects and deteriorate natural visualization and level of immersion during user interaction in AR environments. In this paper, we propose an approach to exploiting the use of rectangular markers to support tangible AR interaction based on fingertip touch using small-sized markers. It basically adjusts the length, width, and interior area of rectangular markers to make them more suitably fit to longish objects like fingers. It also utilizes convex polygons to resolve the partial occlusion of a marker and properly enlarges the pattern area of a marker while adjusting its size without deteriorating the quality of marker detection. We obtained encouraging results from users that the approach can provide better natural visualization and higher level of immersion, and be accurate and tangible enough to support a pseudo feeling of touching virtual products with human hands or fingertips during design evaluation of digital handheld products.

Performance Enhancement of Marker Detection and Recognition using SVM and LDA (SVM과 LDA를 이용한 마커 검출 및 인식의 성능 향상)

  • Kang, Sun-Kyoung;So, In-Mi;Kim, Young-Un;Lee, Sang-Seol;Jung, Sung-Tae
    • Journal of Korea Multimedia Society
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    • v.10 no.7
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    • pp.923-933
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    • 2007
  • In this paper, we present a method for performance enhancement of the marker detection system by using SVM(Support Vector Machine) and LDA(Linear Discriminant Analysis). It converts the input image to a binary image and extracts contours of objects in the binary image. After that, it approximates the contours to a list of line segments. It finds quadrangle by using geometrical features which are extracted from the approximated line segments. It normalizes the shape of extracted quadrangle into exact squares by using the warping technique and scale transformation. It extracts feature vectors from the square image by using principal component analysis. It then checks if the square image is a marker image or a non-marker image by using a SVM classifier. After that, it computes feature vectors by using LDA for the extracted marker images. And it calculates the distance between feature vector of input marker image and those of standard markers. Finally, it recognizes the marker by using minimum distance method. Experimental results show that the proposed method achieves enhancement of recognition rate with smaller feature vectors by using LDA and it can decrease false detection errors by using SVM.

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Korean '-e ci' Constructions: Anti-Causatives or Passives?

  • Song, Jina
    • Language and Information
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    • v.20 no.1
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    • pp.51-71
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    • 2016
  • The status of the Korean morphological marker '-e ci' has been controversial whether it is a passive marker, an anticausative marker, or a passive/anticausative marker. However, the previous approaches that tried to classify '-e ci' constructions based on the syntactic verb classes (i.e. intransitive or transitive) were short of explaining the properties of the constructions. In this study, the '-e ci' constructions were distinguished based on agentivity, following Levin & Rappaport Hovav (1995) and Alexiadou et al. (2006). Moreover, how the verbal root meaning is associated with the passive/anticausative construction was investigated by means of Distributed Morphology (DM) (Embick 2010; Marantz 1997). I argued that the morphological marker '-e ci' is the instantiation of the absence of external arguments. With respect to the behavior of the Korean '-e ci' constructions with the semantics of each verbal root class, I found out that the '-e ci' constructions can form passives with the verbal roots that require the external arguments; whereas, the anticausatives cannot be formed with the roots that necessarily require the agentive arguments. However, contrary to the previous arguments that '-e ci' passives can be only formed with transitive verbs, it is discovered that non-agentive transitive roots do form anticausatives. Moreover, I argued that there are two types of the anticausatives - zero and '-e ci' anticausatives. Since the valency reduction is marked by the non-active voice morphology, the zero anticausatives appear only with the roots that do not require external arguments. The different '-e ci' constructions (passives, '-e ci', and zero anticausatives) are represented by the distinct syntactic structures. I proposed that the morphological similarity between the passives and the '-e ci' anticausatives is due to the presence of VoiceP, which introduces the external arguments. Moreover, the lack of the voice morphology in the zero anticausatives is explained by the absence of the VoiceP.

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Assessment of Genetic Relationship among Watermelon Varieties Revealed by ISSR Marker (Inter-simple sequence repeat (ISSR) marker를 이용한 수박의 품종간 유연관계 분석)

  • Kwon Yong-Sham;Lee Won-Sik;Cho Il-Ho
    • Journal of Life Science
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    • v.16 no.2 s.75
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    • pp.219-224
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    • 2006
  • Inter-simple sequence repeat (ISSR) analysis were used to assess genetic diversity among 18 genotypes of watermelon (Citrullus lanatus Thunb.) including breeding lines and commercial varieties. The 21 ISSR primers selected from 100 primers were showed the amplification of 105 reproducible fragments ranging from about 200 bp to 5000 bp. A total of 58 DNA fragments were polymorphic with an average 2.7 polymorphic bands per primer. The polymorphic primers were divided into 18 anchored primers and 3 non anchored primers. All of the anchored primers were di-nucleotide repeat motif, and was more polymorphic than non anchored primers. Eighteen watermelon genotypes were classified into two large groups. Clustering was in some accordance with the division of fruit shape into 18 watermelon. Therefore, ISSR markers may be suitable for variety discrimination and for constructing a linkage map of watermelon.