• 제목/요약/키워드: new strain

검색결과 2,120건 처리시간 0.026초

Draft Genome Analysis of Antimicrobial Streptomyces Isolated from Himalayan Lichen

  • Kim, Byeollee;Han, So-Ra;Lamichhane, Janardan;Park, Hyun;Oh, Tae-Jin
    • Journal of Microbiology and Biotechnology
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    • 제29권7호
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    • pp.1144-1154
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    • 2019
  • There have been several studies regarding lichen-associated bacteria obtained from diverse environments. Our screening process identified 49 bacterial species in two lichens from the Himalayas: 17 species of Actinobacteria, 19 species of Firmicutes, and 13 species of Proteobacteria. We discovered five types of strong antimicrobial agent-producing bacteria. Although some strains exhibited weak antimicrobial activity, NP088, NP131, NP132, NP134, and NP160 exhibited strong antimicrobial activity against all multidrug-resistant strains. Polyketide synthase (PKS) fingerprinting revealed results for 69 of 148 strains; these had similar genes, such as fatty acid-related PKS, adenylation domain genes, PfaA, and PksD. Although the association between antimicrobial activity and the PKS fingerprinting results is poorly resolved, NP160 had six types of PKS fingerprinting genes, as well as strong antimicrobial activity. Therefore, we sequenced the draft genome of strain NP160, and predicted its secondary metabolism using antiSMASH version 4.2. NP160 had 46 clusters and was predicted to produce similar secondary metabolites with similarities of 5-100%. Although NP160 had 100% similarity with the alkylresorcinol biosynthetic gene cluster, our results showed low similarity with existing members of this biosynthetic gene cluster, and most have not yet been revealed. In conclusion, we expect that lichen-associated bacteria from the Himalayas can produce new secondary metabolites, and we found several secondary metabolite-related biosynthetic gene clusters to support this hypothesis.

Gamma-Aminobutyric Acid Production from a Novel Enterococcus avium JS-N6B4 Strain Isolated from Edible Insects

  • Jo, Min-Ho;Hong, Seong-Jin;Lee, Ha-Nul;Ju, Jung-Hyun;Park, Bo-Ram;Lee, Jun-ho;Kim, Sun-Am;Eun, Jong-Bang;Wee, Young-Jung;Kim, Young-Min
    • Journal of Microbiology and Biotechnology
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    • 제29권6호
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    • pp.933-943
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    • 2019
  • Gamma-aminobutyric acid (GABA)-producing strains were isolated from four edible insects and subjected to 16S rRNA sequence analysis. Among the four GABA-producing bacteria, Enterococcus avium JS-N6B4 exhibited the highest GABA-production, while cultivation temperature, initial pH, aerobic condition, and mono-sodium glutamate (MSG) feeding were found to be the key factors affecting GABA production rate. The culture condition was optimized in terms of glucose, yeast extract, and MSG concentrations using response surface methodology (RSM). GABA production up to 16.64 g/l was obtained under the conditions of 7 g/l glucose, 45 g/l yeast extract, and 62 g/l MSG through the optimization of medium composition by RSM. Experimental GABA production was 13.68 g/l, which was close to the predicted value (16.64 g/l) calculated from the analysis of variance, and 2.79-fold higher than the production achieved with basic medium. Therefore, GABA-producing strains may help improve the GABA production in edible insects, and provide a new approach to the use of edible insects as effective food biomaterials.

신품종 표고버섯 '산장향'의 교배 육성 및 재배 특성 (Breeding and Cultural Characteristics of Newly Bred Lentinula edodes Strain 'Sanjanghyang')

  • 박영애;장영선;유림;이봉훈;가강현
    • 한국균학회지
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    • 제47권2호
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    • pp.143-152
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    • 2019
  • 본 실험은 '산백향'과 '장안1호'의 단포자 간 교잡에 의해 새로운 품종을 만들었으며 그 이름을 '산장향'이라 명명하였다. '산장향'의 주요 형태적 특성은 갓이 평반구형이며, 갓의 직경은 67.1 mm, 갓두께는 16.9 mm이었다. 주름살 측면 모양은 부정형이며 주름의 밀도는 조밀하고 주름살의 폭은 좁다. 인편은 흰색 또는 옅은 갈색으로 갓 전체에 분포하였다. 대조품종인 '산백향'보다 대의 길이가 길고, 갓 색깔은 갈색계열이나 적색이 진하였다. 대의 표면에는 털이 있고 대와 같은 크림색이었다. 버섯은 산발 발생으로 솎아주기 작업을 적게 할 수 있었다. 자실체의 발이온도는 평균 $15-19^{\circ}C$으로 중온성이었다. '산장향'의 발생시기는 봄, 가을 이었다. 자실체 발생은 3차까지 진행하였고, 1차(89%), 2차(4%) 및 3차(7%)의 발생비율을 보였다.

Mechanical behaviour of waste powdered tiles and Portland cement treated soft clay

  • Al-Bared, Mohammed A.M.;Harahap, Indra S.H.;Marto, Aminaton;Abad, Seyed Vahid Alavi Nezhad Khalil;Mustaffa, Zahiraniza;Ali, Montasir O.A.
    • Geomechanics and Engineering
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    • 제19권1호
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    • pp.37-47
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    • 2019
  • The main objective of this study is to evaluate and compare the efficiency of ordinary Portland cement (OPC) in enhancing the unconfined compressive strength of soft soil alone and soft soil mixed with recycled tiles. The recycled tiles have been used to treat soft soil in a previous research by Al-Bared et al. (2019) and the results showed significant improvement, but the improved strength value was for samples treated with low cement content (2%). Hence, OPC is added alone in this research in various proportions and together with the optimum value of recycled tiles in order to investigate the improvement in the strength. The results of the compaction tests of the soft soil treated with recycled tiles and 2, 4, and 6% OPC revealed an increment in the maximum dry density and a decrement in the optimum moisture content. The optimum value of OPC was found to be 6%, at which the strength was the highest for both samples treated with OPC alone and samples treated with OPC and 20% recycled tiles. Under similar curing time, the strength of samples treated with recycled tiles and OPC was higher than the treated soil with the same percentage of OPC alone. The stress-strain curves showed ductile plastic behaviour for the untreated soft clay and brittle behaviour for almost all treated samples with OPC alone and OPC with recycled tiles. The microstructural tests indicated the formation of new cementitious products that were responsible for the improvement of the strength, such as calcium aluminium silicate hydrate. This research promotes recycled tiles as a green stabiliser for soil stabilisation capable of reducing the amount of OPC required for ground improvement. The replacement of OPC with recycled tiles resulted in higher strength compared to the control mix and this achievement may results in reducing both OPC in soil stabilisation and the disposal of recycled tiles into landfills.

Nonlinear thermoelastic analysis of FGM thick plates

  • Bouhlali, Malika;Chikh, Abdelbaki;Bouremana, Mohammed;Kaci, Abdelhakim;Bourada, Fouad;Belakhdar, Khalil;Tounsi, Abdelouahed
    • Coupled systems mechanics
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    • 제8권5호
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    • pp.439-457
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    • 2019
  • In this paper, a new application of a four variable refined plate theory to analyze the nonlinear bending of functionally graded plates exposed to thermo-mechanical loadings, is presented. This recent theory is based on the assumption that the transverse displacements consist of bending and shear components in which the bending components do not contribute toward shear forces, and similarly, the shear components do not contribute toward bending moments. The derived transverse shear strains has a quadratic variation across the thickness that satisfies the zero traction boundary conditions on the top and bottom surfaces of the plate without using shear correction factors. The material properties are assumed to vary continuously through the thickness of the plate according to a power-law distribution of the volume fraction of the constituents. The solutions are achieved by minimizing the total potential energy. The non-linear strain-displacement relations in the von Karman sense are used to derive the effect of geometric non-linearity. It is concluded that the proposed theory is accurate and simple in solving the nonlinear bending behavior of functionally graded plates.

Comparison of Functional Compounds and Micronutrients of Chicken Breast Meat by Breeds

  • Ali, Mahabbat;Lee, Seong-Yun;Park, Ji-Young;Jung, Samooel;Jo, Cheorun;Nam, Ki-Chang
    • 한국축산식품학회지
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    • 제39권4호
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    • pp.632-642
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    • 2019
  • The concentrations of functional compounds and micronutrients of chicken breast from native chickens were compared with those from broiler. Totally 200 male chicks from a commercial native chicken (HH) and three newly bred native chicken strains (2A, 2C, and 2D) were reared for about 2 kg of final live weight up to 12 wk. After slaughtered, antioxidant dipeptides, reducing sugar, free amino acids, vitamins, and minerals of the breast muscles were analyzed with those from broilers with similar live weight. Mostly native chicken strains had higher contents of carnosine, anserine, and reducing sugar than the broiler. Especially HH implied the highest values of carnosine and anserine, and 2C did the highest of reducing sugar (p<0.05). Vitamin A contents between native chickens and broiler were not significantly different (p>0.05). The contents of ${\alpha}-tocopherol$ were significantly higher in 2C than those of HH or broiler (p<0.05). Native chicken strains contained lower cholesterol levels than the broiler. Broiler had higher contents of P, Mg, and Na than native chickens (p<0.05), but it had lower content of Cu than HH or 2A. The savory free amino acids including glutamic acid was highest in 2A than the other native chickens and broiler (p<0.05). This study confirms that certain new strains of native chickens be a good source in terms of functional compounds and micronutrients which can be attractive health promoting nutritional quality factors.

Transient response of rhombic laminates

  • Anish, Anish;Chaubey, Abhay K.;Vishwakarma, Satyam;Kumar, Ajay;Fic, Stanislaw;Barnat-Hunek, Danuta
    • Structural Engineering and Mechanics
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    • 제70권5호
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    • pp.551-562
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    • 2019
  • In the present study, a suitable mathematical model considering parabolic transverse shear strains for dynamic analysis of laminated composite skew plates under different types of impulse and spatial loads was presented for the first time. The proposed mathematical model satisfies zero transverse shear strain at the top and bottom of the plate. On the basis of the cubic variation of thickness coordinate in in-plane displacement fields of the present mathematical model, a 2D finite element (FE) model was developed including skew transformations in the mathematical model. No shear correction factor is required in the present formulation and damping effect was also incorporated. This is the first FE implementation considering a cubic variation of thickness coordinate in in-plane displacement fields including skew transformations to solve the forced vibration problem of composite skew plates. The effect of transverse shear and rotary inertia was incorporated in the present model. The Newmark-${\beta}$ scheme was adapted to perform time integration from step to step. The $C^0$ FE formulation was implemented to overcome the problem of $C^1$ continuity associated with the cubic variation of thickness coordinate in in-plane displacement fields. The numerical studies showed that the present 2D FE model predicts the result close to the analytical results. Many new results varying different parameter such as skew angles, boundary conditions, etc. were presented.

Comparative Study on Various Ductile Fracture Models for Marine Structural Steel EH36

  • Park, Sung-Ju;Lee, Kangsu;Cerik, Burak Can;Choung, Joonmo
    • 한국해양공학회지
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    • 제33권3호
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    • pp.259-271
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    • 2019
  • It is important to obtain reasonable predictions of the extent of the damage during maritime accidents such as ship collisions and groundings. Many fracture models based on different mechanical backgrounds have been proposed and can be used to estimate the extent of damage involving ductile fracture. The goal of this study was to compare the damage extents provided by some selected fracture models. Instead of performing a new series of material constant calibration tests, the fracture test results for the ship building steel EH36 obtained by Park et al. (2019) were used which included specimens with different geometries such as central hole, pure shear, and notched tensile specimens. The test results were compared with seven ductile fracture surfaces: Johnson-Cook, Cockcroft-Latham-Oh, Bai-Wierzbicki, Modified Mohr-Coulomb, Lou-Huh, Maximum shear stress, and Hosford-Coulomb. The linear damage accumulation law was applied to consider the effect of the loading path on each fracture surface. The Swift-Voce combined constitutive model was used to accurately define the flow stress in a large strain region. The reliability of these simulations was verified by the good agreement between the axial tension force elongation relations captured from the tests and simulations without fracture assignment. The material constants corresponding to each fracture surface were calibrated using an optimization technique with the minimized object function of the residual sum of errors between the simulated and predicted stress triaxiality and load angle parameter values to fracture initiation. The reliabilities of the calibrated material constants of B-W, MMC, L-H, and HC were the best, whereas there was a high residual sum of errors in the case of the MMS, C-L-O, and J-C models. The most accurate fracture predictions for the fracture specimens were made by the B-W, MMC, L-H, and HC models.

Lichen-Associated Bacterium, a Novel Bioresource of Polyhydroxyalkanoate (PHA) Production and Simultaneous Degradation of Naphthalene and Anthracene

  • Nahar, Shamsun;Jeong, Min-Hye;Hur, Jae-Seoun
    • Journal of Microbiology and Biotechnology
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    • 제29권1호
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    • pp.79-90
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    • 2019
  • Lichens are generally known as self-sufficient, symbiotic life-forms between fungi and algae/cyanobacteria, and they also provide shelter for a wide range of beneficial bacteria. Currently, bacterial-derived biodegradable polyhydroxyalkanoate (PHA) is grabbing the attention of many researchers as a promising alternative to non-degradable plastics. This study was conducted to develop a new method of PHA production using unexplored lichen-associated bacteria, which can simultaneously degrade two ubiquitous industrial toxins, anthracene and naphthalene. Here, 49 lichen-associated bacteria were isolated and tested for PHA synthesis. During the GC-MS analysis, a potential strain of EL19 was found to be a 3-hydroxyhexanoate (3-HHx) accumulator and identified as Pseudomonas sp. based on the 16S rRNA sequencing. GC analysis revealed that EL19 was capable of accumulating 30.62% and 19.63% of 3-HHx from naphthalene and anthracene, respectively, resulting in significant degradation of 98% and 96% of naphthalene and anthracene, respectively, within seven days. Moreover, the highly expressed phaC gene verified the genetic basis of $PHA_{mcl}$ production under nitrogen starvation conditions. Thus, this study strongly supports the hypothesis that lichen-associated bacteria can detoxify naphthalene and anthracene, store energy for extreme conditions, and probably help the associated lichen to live in extreme conditions. So far, this is the first investigation of lichen-associated bacteria that might utilize harmful toxins as feasible supplements and convert anthracene and naphthalene into eco-friendly 3-HHx. Implementation of the developed method would reduce the production cost of $PHA_{mcl}$ while removing harmful waste products from the environment.

Effect of nonlinear FG-CNT distribution on mechanical properties of functionally graded nano-composite beam

  • Zerrouki, Rachid;Karas, Abdelkader;Zidour, Mohamed;Bousahla, Abdelmoumen Anis;Tounsi, Abdelouahed;Bourada, Fouad;Tounsi, Abdeldjebbar;Benrahou, Kouider Halim;Mahmoud, S.R.
    • Structural Engineering and Mechanics
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    • 제78권2호
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    • pp.117-124
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    • 2021
  • This work focused on the novel numerical tool for the bending responses of carbon nanotube reinforced composites (CNTRC) beams. The higher order shear deformation beam theory (HSDT) is used to determine strain-displacement relationships. A new exponential function was introduced into the carbon nanotube (CNT) volume fraction equation to show the effect of the CNT distribution on the CNTRC beams through displacements and stresses. To determine the mechanical properties of CNTRCs, the rule of the mixture was employed by assuming that the single-walled carbon nanotubes (SWCNTs)are aligned and distributed in the matrix. The governing equations were derived by Hamilton's principle, and the mathematical models presented in this work are numerically provided to verify the accuracy of the present theory. The effects of aspect ratio (l/d), CNT volume fraction (Vcnt), and the order of exponent (n) on the displacement and stresses are presented and discussed in detail. Based on the analytical results. It turns out that the increase of the exponent degree (n) makes the X-beam stiffer and the exponential CNTs distribution plays an indispensable role to improve the mechanical properties of the CNTRC beams.