• 제목/요약/키워드: mutation rate

검색결과 347건 처리시간 0.028초

Prevalence and Clinical Profile of EGFR Mutation In Non-Small-Cell Lung Carcinoma Patients in Southwest China

  • Zhou, Juan;Song, Xing-Bo;He, He;Zhou, Yi;Lu, Xiao-Jun;Ying, Bin-Wu
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권3호
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    • pp.965-971
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    • 2016
  • Aims: To investigate the distribution of epidermal growth factor receptor (EGFR) mutations, and explore any relationships with clinical characteristics in non-small-cell lung carcinoma (NSCLC) patients. Materials and Methods: EGFR mutations were assessed by ADx-ARMS in 261 NSCLC patients from West China Hospital of Sichuan University. Relationships between EGFR mutation and clinical characteristics were analyzed by SPSS. Results: The EGFR mutation rate was 48.7% (127/261), 19-del and L858R mutations occurred predominantly, accounting for 33.1% and 40.9%, respectively, in mutated cases. Moreover, 10.2% patients were found to carry double mutations. EGFR mutations occurred more frequently in women (57.5%) than in men (41.8%) (P=0.01), and were more frequent in non-smokers (61.2%) than in former or current smokers (31.2%) (P<0.00). In addition, they were more common in adenocarcinomas (52.8%) and adenosquamous carcinomas (42.8%) than in squamous cell carcinomas (14.8%) (p<0.00). However, only smoking history and pathological types, rather than gender, proved to be associated with EGFR mutations on multivariate logistic regression analysis. No significant differences in pathological stage and metastasis status were found between EGFR wild-type and mutated cases, although EGFR mutation type was related to pathological type (p=0.00) - 19-del, L858R and other mutation types respectively occurred in 34.2%, 42.5% and 23.3% of adenocarcinomas, but in 14.3%, 0% and 85.7% of non-adenocarcinomas. Conclusions: The EGFR mutation rate was 48.7% in NSCLCs in Southwest China, so that nearly 40% patients might benefit from targeted therapies. Smoking status and pathological types were independent predictors of EGFR mutation, while EGFR mutation type was related to only pathological type, rather than smoking status.

구륜 이동 로보트의 경로 추적을 위한 Fuzzy-Genetic Controller 설계 (Design fuzzy-genetic controller for path tracking in wheeled-mobile robot)

  • 김상원;김성희;박종국
    • 제어로봇시스템학회:학술대회논문집
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    • 제어로봇시스템학회 1997년도 한국자동제어학술회의논문집; 한국전력공사 서울연수원; 17-18 Oct. 1997
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    • pp.512-515
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    • 1997
  • In this paper the fuzzy-genetic controller for path-tracking of WMRs is proposed. Fuzzy controller is implemented to adaptive adjust the crossover rate and mutation rate, and genetic algorithm is implemented to adaptive adjust the control gain during the optimization. The computer simulation shows that the proposed fuzzy-genetic controller is effective.

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Mutation Breeding of Mushroom by Radiation

  • Sathesh-Prabu, Chandran;Lee, Young-Keun
    • 방사선산업학회지
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    • 제5권4호
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    • pp.285-295
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    • 2011
  • Mushrooms belonging to macrofungi have been consumed by humans for their nutritional and medicinal values for centuries throughout the world. Mushroom farming is practiced in more than 100 countries of the world, with production increasing at a rate of 7% per annum. High yield and good quality are always the principal goals for agriculturally important crops, including mushrooms. Several breeding methods are employed for strain improvement such as mass selection based on the natural chance mutation and induced mutation (mutation breeding), protoplast fusion technology, cross breeding and transgenic breeding. However, mutation breeding has shown prominent success in crop plant improvement. Though several-hundred mutant crop varieties have been developed around the world, the mutation breeding of mushrooms is limited. This review paper explores the potential application of radiation on the development of mutant varieties of mushrooms for breeding with desired traits such as better quality and productivity.

한방비만치료임상례중 ${\beta}3$ Adrenergic Receptor 변이율에 대한 고찰 (비만유전자보유유무에 따른 치료효과 비교) (Mutations of ${\beta}3$ Adrenergic Receptor in Korean Patients treated with Herbal Dieting Program for Obesity)

  • 김동열;김길수;김선민
    • 한방비만학회지
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    • 제2권1호
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    • pp.43-52
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    • 2002
  • Purpose & Methods: In order to study obese gene mutation rate in obese Korean patients and to investigate the effect at Chegamuiyiin-tang and electro-lipolysis-acupuncture on obesity treatment. the difference of the reaction to herbal dieting between patients with ${\beta}3$ adrenergic receptor mutation and the patients with wild type ${\beta}3$ adrenergic receptor is observed. Results: Chegamuiyiin-tang and electro-lipolysis-acupuncture treatment are effective on the treatment of obesity in weight reduction. body fat reduction and the circumferences of arm, abdomen, hip and thigh. In the comparison of ${\beta}3$ adrenergic receptor wild type and ${\beta}3$ adrenergic receptor mutation groups, body fat was more reduced with statistical significance, and as for BMI change and body weight change were higher in ${\beta}3$ adrenergic receptor mutation groups with no statistical significance. In the comparison of ${\beta}3$ adrenergic receptor wild type and ${\beta}3$ adrenergic receptor mutation groups among BMI under 25 patients change rate of body weight. BMI, body fact percentage, WHR and body circumference were higher in ${\beta}3$ adrenergic receptor mutation group than in ${\beta}3$ adrenergic receptor wild type group. Conclusion: These results imply that herbal dieting program combined with electro-lipolysis-acupuncture is more effective on reducing body weight and body fat in ${\beta}3$ adrenergic receptor mutation group than wild type group, and that the earlier the treatment is applied, the more effective it is.

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Adaptive Control of Strong Mutation Rate and Probability for Queen-bee Genetic Algorithms

  • Jung, Sung-Hoon
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • 제12권1호
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    • pp.29-35
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    • 2012
  • This paper introduces an adaptive control method of strong mutation rate and probability for queen-bee genetic algorithms. Although the queen-bee genetic algorithms have shown good performances, it had a critical problem that the strong mutation rate and probability should be selected by a trial and error method empirically. In order to solve this problem, we employed the measure of convergence and used it as a control parameter of those. Experimental results with four function optimization problems showed that our method was similar to or sometimes superior to the best result of empirical selections. This indicates that our method is very useful to practical optimization problems because it does not need time consuming trials.

Analysis of CEA Expression and EGFR Mutation Status in Non-small Cell Lung Cancers

  • Yang, Zhong-Ming;Ding, Xian-Ping;Pen, Lei;Mei, Lin;Liu, Ting
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권8호
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    • pp.3451-3455
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    • 2014
  • Background: The serum carcinoembryonic antigen (CEA) level can reflect tumor growth, recurrence and metastasis. It has been reported that epidermal growth factor receptor (EGFR) mutations in exons 19 and 21may have an important relationship with tumor cell sensitivity to EGFR-TKI therapy. In this study, we investigated the clinical value of EGFR mutations and serum CEA in patients with non-small cell lung cancer (NSCLC). Materials and Methods: The presence of mutations in EGFR exons 19 and 21 in the tissue samples of 315 patients with NSCLC was detected with real-time fluorescent PCR technology, while the serum CEA level in cases who had not yet undergone surgery, radiotherapy, chemotherapy and targeted therapy were assessed by electrochemical luminescence. Results: The mutation rates in EGFR exons 19 and 21 were 23.2% and 14.9%, respectively, with the two combined in 3.81%. Measured prior to the start of surgery, radiotherapy, chemotherapy and targeted treatment, serum CEA levels were abnormally high in 54.3% of the patients. In those with a serum CEA level <5 ng/mL, the EGFR mutation rate was 18.8%, while with 5~19 ng/mL and ${\geq}20ng/mL$, the rates were 36.4% and 62.5%. In addition, in the cohort of patients with the CEA level being 20~49 ng/mL, the EGFR mutation rate was 85.7%, while in those with the CEA level ${\geq}50ng/mL$, the EGFR mutation rate was only 20.0%, approximately the same as in cases with the CEA level<5 ng/mL. Conclusions: There is a positive correlation between serum CEA expression level and EGFR mutation status in NSCLC patients, namely the EGFR mutation-positive rate increases as the serum CEA expression level rises within a certain range (${\geq}20ng/mL$, especially 20~49 ng/mL). If patient samples are not suitable for EGFR mutation testing, or cannot be obtained at all, testing serum CEA levels might be a simple and easy screening method. Hence, for the NSCLC patients with high serum CEA level (${\geq}20ng/mL$, especially 20~49 ng/mL), it is worthy of attempting EGFR-TKI treatment, which may achieve better clinical efficacy and quality of life.

보리 화학돌연변이제 처리 $M_2$ 유묘의 Isozyme band pattern 차이에 의한 돌연변이율 검정 (Evaluation of Mutation Rate by Differences of Isozyme Band Patterns on $M_2$ Seedling Treated with Chemical Mutagen in Barley)

  • Bon Cheol, Koo;M., Kucharska
    • 한국작물학회지
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    • 제42권2호
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    • pp.214-219
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    • 1997
  • 세 유형의 화학 돌연변이제 처리(1.5mol Na$N_2$ +0.75mol MNH, 0.75mo1 MNH+0.75mo1 M-NH 및 0.5mol MNH+0.5mol MNH)를 한 M$_2$ 유묘를 이용, Est 1, 2, 4, 5, GOT 1, 2, 3, LAP 1, 2 등의 isozyme band pattern에 대한 돌연변이율을 조사하였다. 1. 세 가지 돌연변이제로 처리된 M$_2$식물체에 대한 돌연변이율 조사를 실시하였는데 엽록체에 대한 돌연변이율은 폴랜드 품종인 Dema에서는 3.3%였고 사천006에서는 1.8%로 나타났다. 2. Esterase유전자좌에 대한 돌연변이율은 Dema에서 3.5%로 사천 006의 0%보다 높았으며 GOT와 LAP에서는 두 품종간 차이가 없었다. 3. 세 가지 isozyme중 대개의 돌연번이체가 Es-terase에 관계된 유전자좌에서 발생하였으며 (75% 차지) 나머지에서의 돌연변이율은 극히 미미하였다.

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Performance Improvement of Evolution Strategies using Reinforcement Learning

  • Sim, Kwee-Bo;Chun, Ho-Byung
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • 제1권1호
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    • pp.125-130
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    • 2001
  • In this paper, we propose a new type of evolution strategies combined with reinforcement learning. We use the variances of fitness occurred by mutation to make the reinforcement signals which estimate and control the step length of mutation. With this proposed method, the convergence rate is improved. Also, we use cauchy distributed mutation to increase global convergence faculty. Cauchy distributed mutation is more likely to escape from a local minimum or move away from a plateau. After an outline of the history of evolution strategies, it is explained how evolution strategies can be combined with the reinforcement learning, named reinforcement evolution strategies. The performance of proposed method will be estimated by comparison with conventional evolution strategies on several test problems.

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전리방사선 및 자외선의 미생물 돌연변이와 DNA 손상에 대한 영향 (Effects of ionizing and ultraviolet radiation on microbial mutation and DNA damage)

  • 남지현;신지혜;이정윤;이동훈
    • 미생물학회지
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    • 제53권1호
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    • pp.20-28
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    • 2017
  • 감마선, 전자빔 등과 같은 전리방사선과 자외선을 이용하는 물리적 멸균방법은 살균 효과와 경제성이 우수하므로 다양한 산업분야에서 사용되고 있으나, 미생물의 돌연변이를 유발하는 요인으로 작용할 수 있다. 본 연구에서는 전리방사선 및 자외선의 유전학적 안전성을 평가하기 위해서 Salmonella enterica와 Escherichia coli 균주에 자외선, 감마선, 전자빔을 조사한 후에 생존율, 돌연변이율, DNA 손상 효과를 조사하였다. 자외선, 감마선, 전자빔의 조사선량이 증가함에 따라 시험 균주의 생존율이 모두 급격히 감소하였으며, 90% 이상이 사멸되는 조사선량은 각각 $0.40{\sim}25.06mJ/cm^3$, 0.11~0.22 kGy, 0.14~0.53 kGy 이었다. SOS/umu-test에서는 자외선, 감마선, 전자빔에 노출된 모든 시료에서 DNA 손상을 유발하는 유전독성이 확인되었다. Ames test에서는 자외선과 감마선에 노출된 후에 복귀 돌연변이율이 각각 $3.82{\times}10^{-4}$, $9.84{\times}10^{-6}$까지 증가하였다. S. enterica TA100의 사멸율이 99.99% 이상 되는 선량의 자외선, 감마선, 전자빔에서의 복귀 돌연변이율은 각각 자연돌연변이율 대비 347배, 220배, 0.6배 증가하였다. E. coli CSH100 균주를 자외선, 감마선, 전자빔에 노출시킨뒤에 조사한 리팜피신내성 돌연변이율은 각각 $2.46{\times}10^{-6}$, $1.66{\times}10^{-6}$, $4.12{\times}10^{-7}$ 이었다. 따라서 사멸효과의 관점에서는 감마선 처리가 미생물 제어에 효과적이라 할 수 있으며, 전자빔은 DNA 손상과 세균돌연변이를 적게 유발하며 사멸효과를 얻는 장점이 있다고 생각된다.

유전 알고리즘의 조기수렴 저감을 위한 연산자 소인방법 연구 (On Sweeping Operators for Reducing Premature Convergence of Genetic Algorithms)

  • 이홍규
    • 제어로봇시스템학회논문지
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    • 제17권12호
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    • pp.1210-1218
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    • 2011
  • GA (Genetic Algorithms) are efficient for searching for global optima but may have some problems such as premature convergence, convergence to local extremum and divergence. These phenomena are related to the evolutionary operators. As population diversity converges to low value, the search ability of a GA decreases and premature convergence or converging to local extremum may occur but population diversity converges to high value, then genetic algorithm may diverge. To guarantee that genetic algorithms converge to the global optima, the genetic operators should be chosen properly. In this paper, we analyze the effects of the selection operator, crossover operator, and mutation operator on convergence properties, and propose the sweeping method of mutation probability and elitist propagation rate to maintain the diversity of the GA's population for getting out of the premature convergence. Results of simulation studies verify the feasibility of using these sweeping operators to avoid premature convergence and convergence to local extrema.