• Title/Summary/Keyword: inv

Search Result 90, Processing Time 0.023 seconds

Serotype Distribution and Virulence Profile of Salmonella enterica Serovars Isolated from Food Animals and Humans in Lagos Nigeria

  • Abraham, Ajayi;Stella, Smith;Ibidunni, Bode-Sojobi;Coulibaly, Kalpy Julien;Funbi, Jolaiya Tolulope;Isaac, Adeleye Adeyemi
    • Microbiology and Biotechnology Letters
    • /
    • v.47 no.2
    • /
    • pp.310-316
    • /
    • 2019
  • Distribution of Salmonella enterica serovars and their associated virulence determinants is wide-spread among food animals, which are continuously implicated in periodic salmonellosis outbreaks globally. The aim of this study was to determine and evaluate the diversity of five Salmonella serovar virulence genes (invA, pefA, cdtB, spvC and iroN) isolated from food animals and humans. Using standard microbiological techniques, Salmonella spp. were isolated from the feces of humans and three major food animals. Virulence determinants of the isolates were assayed using PCR. Clonal relatedness of the dominant serovar was determined via pulsed-field gel electrophoresis (PFGE) using the restriction enzyme, Xbal. Seventy one Salmonella spp. were isolated and serotyped into 44 serovars. Non-typhoidal Salmonella (NTS; 68) accounted for majority (95.8%) of the Salmonella serovars. Isolates from chicken (34) accounted for 47.9% of all isolates, out of which S. Budapest (14) was predominant (34.8%). However, the dominant S. Budapest serovars showed no genetic relatedness. The invA gene located on SPI-1 was detected in all isolates. Furthermore, 94% of the isolates from sheep harbored the spvC genes. The iroN gene was present in 50%, 100%, 88%, and 91% of isolates from human, chicken, sheep, and cattle, respectively. The pefA gene was detected in 18 isolates from chicken and a single isolate from sheep. Notably, having diverse Salmonella serovars containing plasmid encoded virulence genes circulating the food chain is of public health significance; hence, surveillance is required.

Rapid and Sensitive Detection of Salmonella in Chickens Using Loop-Mediated Isothermal Amplification Combined with a Lateral Flow Dipstick

  • Liu, Zhi-Ke;Zhang, Qiu-Yu;Yang, Ning-Ning;Xu, Ming-Guo;Xu, Jin-Feng;Jing, Ming-Long;Wu, Wen-Xing;Lu, Ya-Dong;Shi, Feng;Chen, Chuang-Fu
    • Journal of Microbiology and Biotechnology
    • /
    • v.29 no.3
    • /
    • pp.454-464
    • /
    • 2019
  • Salmonellosis is a highly contagious bacterial disease that threatens both human and poultry health. Tests that can detect Salmonella in the field are urgently required to facilitate disease control and for epidemiological investigations. Here, we combined loop-mediated isothermal amplification (LAMP) with a chromatographic lateral flow dipstick (LFD) to rapidly and accurately detect Salmonella. LAMP primers were designed to target the Salmonella invA gene. LAMP conditions were optimized by adjusting the ratio of inner to outer primers, $MgSO_4$ concentration, dNTP mix concentration, amplification temperature, and amplification time. We evaluated the specificity of our novel LAMP-LFD method using six Salmonella species and six related non-Salmonella strains. All six of the Salmonella strains, but none of the non-Salmonella strains, were amplified. LAMP-LFD was sensitive enough to detect concentrations of Salmonella enterica subsp. enterica serovar Pullorum genomic DNA as low as $89fg/{\mu}l$, which is 1,000 times more sensitive than conventional PCR. When artificially contaminated feed samples were analyzed, LAMP-LFD was also more sensitive than PCR. Finally, LAMP-LFD gave no false positives across 350 chicken anal swabs. Therefore, our novel LAMP-LFD assay was highly sensitive, specific, convenient, and fast, making it a valuable tool for the early diagnosis and monitoring of Salmonella infection in chickens.

Design of Cryptographic Processor for Rijndael Algorithm (Rijndael 암호 알고리즘을 구현한 암호 프로세서의 설계)

  • 전신우;정용진;권오준
    • Journal of the Korea Institute of Information Security & Cryptology
    • /
    • v.11 no.6
    • /
    • pp.77-87
    • /
    • 2001
  • This paper describes a design of cryptographic processor that implements the Rijndael cipher algorithm, the Advanced Encryption Standard algorithm. It can execute both encryption and decryption, and supports only 128-bit block and 128-bit keys. As the processor is implemented only one round, it must iterate 11 times to perform an encryption/decryption. We implemented the ByteSub and InvByteSub transformation using the algorithm for minimizing the increase of area which is caused by different encryption and decryption. It could reduce the memory size by half than implementing, with only ROM. We estimate that the cryptographic processor consists of about 15,000 gates, 32K-bit ROM and 1408-bit RAM, and has a throughput of 1.28 Gbps at 110 MHz clock based on Samsung 0.5um CMOS standard cell library. To our knowledge, this offers more reduced memory size compared to previously reported implementations with the same performance.

Study of monolithic 3D integrated-circuit consisting of tunneling field-effect transistors (터널링 전계효과 트랜지스터로 구성된 3차원 적층형 집적회로에 대한 연구)

  • Yu, Yun Seop
    • Journal of the Korea Institute of Information and Communication Engineering
    • /
    • v.26 no.5
    • /
    • pp.682-687
    • /
    • 2022
  • In this paper, the research results on monolithic three-dimensional integrated-circuit (M3DICs) stacked with tunneling field effect transistors (TFETs) are introduced. Unlike metal-oxide-semiconductor field-effect transistors (MOSFETs), TFETs are designed differently from the layout of symmetrical MOSFETs because the source and drain of TFET are asymmetrical. Various monolithic 3D inverter (M3D-INV) structures and layouts are possible due to the asymmetric structure, and among them, a simple inverter structure with the minimum metal layer is proposed. Using the proposed M3D-INV, this M3D logic gates such as NAND and NOR gates by sequentially stacking TFETs are proposed, respectively. The simulation results of voltage transfer characteristics of the proposed M3D logic gates are investigated using mixed-mode simulator of technology computer aided design (TCAD), and the operation of each logic circuit is verified. The cell area for each M3D logic gate is reduced by about 50% compared to one for the two-dimensional planar logic gates.

Virulence gene profiles and antimicrobial susceptibility of Salmonella Brancaster from chicken

  • Evie Khoo ;Roseliza Roslee ;Zunita Zakaria;Nur Indah Ahmad
    • Journal of Veterinary Science
    • /
    • v.24 no.6
    • /
    • pp.82.1-82.12
    • /
    • 2023
  • Background: The current conventional serotyping based on antigen-antisera agglutination could not provide a better understanding of the potential pathogenicity of Salmonella enterica subsp. enterica serovar Brancaster. Surveillance data from Malaysian poultry farms indicated an increase in its presence over the years. Objective: This study aims to investigate the virulence determinants and antimicrobial resistance in S. Brancaster isolated from chickens in Malaysia. Methods: One hundred strains of archived S. Brancaster isolated from chicken cloacal swabs and raw chicken meat from 2017 to 2022 were studied. Two sets of multiplex polymerase chain reaction (PCR) were conducted to identify eight virulence genes associated with pathogenicity in Salmonella (invasion protein gene [invA], Salmonella invasion protein gene [sipB], Salmonella-induced filament gene [sifA], cytolethal-distending toxin B gene [cdtB], Salmonella iron transporter gene [sitC], Salmonella pathogenicity islands gene [spiA], Salmonella plasmid virulence gene [spvB], and inositol phosphate phosphatase gene [sopB]). Antimicrobial susceptibility assessment was conducted by disc diffusion method on nine selected antibiotics for the S. Brancaster isolates. S. Brancaster, with the phenotypic ACSSuT-resistance pattern (ampicillin, chloramphenicol, streptomycin, sulphonamides, and tetracycline), was subjected to PCR to detect the corresponding resistance gene(s). Results: Virulence genes detected in S. Brancaster in this study were invA, sitC, spiA, sipB, sopB, sifA, cdtB, and spvB. A total of 36 antibiogram patterns of S. Brancaster with a high level of multidrug resistance were observed, with ampicillin exhibiting the highest resistance. Over a third of the isolates displayed ACSSuT-resistance, and seven resistance genes (β-lactamase temoneira [blaTEM], florfenicol/chloramphenicol resistance gene [floR], streptomycin resistance gene [strA], aminoglycoside nucleotidyltransferase gene [ant(3")-Ia], sulfonamides resistance gene [sul-1, sul-2], and tetracycline resistance gene [tetA]) were detected. Conclusion: Multidrug-resistant S. Brancaster from chickens harbored an array of virulence-associated genes similar to other clinically significant and invasive non-typhoidal Salmonella serovars, placing it as another significant foodborne zoonosis.

Accuracy Assessment of Tide Models in Terra Nova Bay, East Antarctica, for Glaciological Studies of DDInSAR Technique (DDInSAR 기반의 빙하연구를 위한 동남극 테라노바 만의 조위모델 정밀도 평가)

  • Han, Hyangsun;Lee, Joohan;Lee, Hoonyol
    • Korean Journal of Remote Sensing
    • /
    • v.29 no.4
    • /
    • pp.375-387
    • /
    • 2013
  • Accuracy assessment of tide models in polar ocean has to be performed to accurately analyze tidal response of glaciers by using Double-Differential Interferometric SAR (DDInSAR) technique. In this study, we used 120 DDInSAR images generated from 16 one-day tandem COSMO-SkyMed DInSAR pairs obtained for 2 years and in situ tide height for 11 days measured by a pressure type wave recorder to assess the accuracy of tide models such as TPXO7.1, FES2004, CATS2008a and Ross_Inv in Terra Nova Bay, East Antarctica. Firstly, we compared the double-differential tide height (${\Delta}\dot{T}$) for Campbell Glacier Tongue extracted from the DDInSAR images with that predicted by the tide models. Tide height (T) from in situ measurement was compared to that of the tide models. We also compared 24-hours difference of tide height ($\dot{T}$) from in situ tide height with that from the tide models. The root mean square error (RMSE) of ${\Delta}\dot{T}$, T and $\dot{T}$ decreased after the inverse barometer effect (IBE)-correction of the tide models, from which we confirmed that the IBE of tide models should be corrected requisitely. The RMSE of $\dot{T}$ and ${\Delta}\dot{T}$ were smaller than that of T. This was because $\dot{T}$ is the difference of tide height during temporal baseline of the DInSAR pairs (24 hours), in which the errors from mean sea level of the tide models and in situ tide, and the tide constituents of $S_2$, $K_2$, $K_1$ and $P_1$ used in the tide models were canceled. This confirmed that $\dot{T}$ and ${\Delta}\dot{T}$ predicted by the IBE-corrected tide models can be used in DDInSAR technique. It was difficult to select an optimum tide model for DDInSAR in Terra Nova Bay by using in situ tide height measured in a short period. However, we could confirm that Ross_Inv is the optimum tide model as it showed the smallest RMSE of 4.1 cm by accuracy assessment using the DDInSAR images.

Detection of Salmonella typhi by Loop-mediated Isothermal Amplification Assay

  • Jo, Yoon-Kyung;Lee, Chang-Yeoul
    • Biomedical Science Letters
    • /
    • v.14 no.2
    • /
    • pp.115-118
    • /
    • 2008
  • Salmonella typhi is frequent causes of foodborne illness and its detection is important for monitoring disease progression. In this study, by using general PCR and novel LAMP (Loop Mediated Isothermal Amplification) assay, we evaluated the usefulness of LAMP assay for detection of Salmonella typhi. In this LAMP assay, forward inner primer (FIP) and back inner primer (BIP) was specially designed for recognizing target invA gene. Target DNA was amplified and visualized as ladder-like pattern of bands on agarose gel within 60 min under isothermal conditions at $65^{\circ}C$. When the sensitivity and reproducibility of LAMP were compared to general PCR, there was no difference of reproducibility but sensitivity of LAMP assay was more efficient than PCR (the detection limit of LAMP assay was 30 fg, while the PCR assay was 3 pg). These results indicate that the LAMP assay is a potential and valuable means for detection of Salmonella typhi, especially for its rapidity, simplicity and low cost.

  • PDF

ON g(x)-INVO CLEAN RINGS

  • El Maalmi, Mourad;Mouanis, Hakima
    • Communications of the Korean Mathematical Society
    • /
    • v.35 no.2
    • /
    • pp.455-468
    • /
    • 2020
  • An element in a ring R with identity is called invo-clean if it is the sum of an idempotent and an involution and R is called invoclean if every element of R is invo-clean. Let C(R) be the center of a ring R and g(x) be a fixed polynomial in C(R)[x]. We introduce the new notion of g(x)-invo clean. R is called g(x)-invo if every element in R is a sum of an involution and a root of g(x). In this paper, we investigate many properties and examples of g(x)-invo clean rings. Moreover, we characterize invo-clean as g(x)-invo clean rings where g(x) = (x-a)(x-b), a, b ∈ C(R) and b - a ∈ Inv(R). Finally, some classes of g(x)-invo clean rings are discussed.

A Study on the Porcelain Body of $MgO-SiO_2$ System(II) ($MgO-SiO_2$ 계 자기에 관한 연구(II))

  • 이응상;이종근;최성철;안기성
    • Journal of the Korean Ceramic Society
    • /
    • v.20 no.3
    • /
    • pp.243-249
    • /
    • 1983
  • This study has examined on the effect for the fitting in porcelain body of MgO-SiO system. The mixture was made of correponding in the theoretical composition of enstatite with Kyul Sung Talc and sea water magnesia cake. Hyup Jin Kaolin as clay minerals to give the mixture plasticity was added 10% by weight of the mixture. Feldspar was added inv various kinds of 1%-20% by weight of the above mixture. After the physical properties and microstructures were carefully examined the following results were obtained. 1. The addition amount of feldspar should generally be from 5% to 10% by weight of the mixture to be good for the properties of the strength and the range of the firing temperature. 2. The 5% addition amount of feldspar was good for the apparent bulk density. 3. 5% and 10% additions showed up stably excellant with respect to the various properties Therefore when we considered the apparent bulk density and the thermal shock resistance 5% addition amount of feldspar showed the most excellant properties between $1350^{\circ}C$ and $1400^{\circ}C$.

  • PDF

Comparison of the Characteristics between Domestic New Ventures and International New Ventures (국내시장지향 벤처와 해외시장지향 벤처의 특성 비교)

  • Park Sang-Moon
    • Journal of Korea Technology Innovation Society
    • /
    • v.8 no.2
    • /
    • pp.809-831
    • /
    • 2005
  • This paper explores the difference between domestic new ventures(DNV) and international new ventures (INV). New ventures pursue business opportunities in their target markets armed with experienced founding team, distinctive competitive strategies, and different entry time at foreign market. As a result, INVs were founded by larger number of founding team and more experienced in international business. Also INVs enter earlier global market and pursue business opportunities than DNVs. in In terms of competitive strategy, INVs highlight continuous quality improvement and diverse customers compared to DNVs focused on intellectual property rights. INVs get higher profitabilities in financial performance. Finally, this paper suggests some managerial implications for new venture to explore business opportunities in the global markets.

  • PDF