• Journal of Photoscience
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• v.7 no.3
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• pp.79-86
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• 2000

Phytochromes are red and far-red light absorbing photoreceptors for photomorphogenesis in plants. The red/far wavelength reversible biliproteins are made up of two structural domains. The light-perceiving function of the photoreceptor resides in the N-terminal domain, whereas the signal transducing regulatory function is located within the C-terminal domain. The characteristic role of the phytochromes as phtosensory molecular switches is derived from the phototransformation between two distinct spectral forms, the red light absorbing Pr and the far-red light absorbing Pfr forms. The photoinduced Pr Pfr phototransformation accompanies subtle conformational changes throughout the phytochrome molecule. The conformational signals are subsequently transmitted to the C-terminal domain through various inter-domain crosstalks and induce the interaction of the activated C-terminal domain with phytochrome interacting factors. Thus the inter-domain crosstalks play critical roles in the photoactivation of the phytochromes. Posttranslational modifications, such as the phosphorylation of Ser-598, are also involved in this process through conformational changes and by modulating inter-domain signaling.

• BMB Reports
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• v.32 no.3
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• pp.215-225
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• 1999

Phytochromes (with gene family members phyA, B, C, D, and E) are a wavelength-dependent light sensor or switch for gene regulation that underscore a number of photo responsive developmental and morphogenic processes in plants. Recently, phytochrome-like pigment proteins have also been discovered in prokaryotes, possibly functioning as an auto-phosphorylating/phosphate-relaying two-component signaling system (Yeh et al., 1997). Phytochromes are photochromically convertible between the light sensing Pr and regulatory active Pfr forms. Red light converts Pr to Pfr, the latter having a "switch-on" conformation. The Pfr form triggers signal transduction pathways to the downstream responses including the expression of photosynthetic and other growth-regulating genes. The components involved in and the molecular mechanisms of the light signal transduction pathways are largely unknown, although G-proteins, protein kinases, and secondary messengers such as $Ca^{2+}$ ions and cGMP are implicated. The 124-127 kDa phytochromes form homodimeric structures. The N-terminal half contains the tetrapyrrolic phytochromobilin for red/far-red light absorption. The C-terminal half includes both a dimerization motif and regulatory box where the red light signal perceived by the chromophore-domain is recognized and transduced to initiate the signal transduction cascade. A working model for the inter-domain signal communication within the phytochrome molecule is proposed in this Review.

• Journal of the Institute of Convergence Signal Processing
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• v.2 no.3
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• pp.32-38
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• 2001

Multi-carrier data transmission system performance is mostly limited by Inter- symbol-interference that is caused by a dispersive characteristic of the transmission channel. In order to enhance the system performance to meet the service requirements of local access, the channel impulse response shortening method incorporated with a channel frequency response compensation method is proposed. For a fast and efficient implementation of the equalizer proposed, Kalman and LMS algorithms are successively used. To verify the channel equalization performance, a set of computer simulation is performed on a filter bank based multitone system operating in a typical high-speed local area data transmission environment. The results showed us a comparable signal-to-interference improvement over the conventional multitone equalization scheme.

• Journal of the Korean Magnetic Resonance Society
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• v.20 no.2
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• pp.56-60
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• 2016

Adenylate kinase (AK) enzyme which acts as the catalyst of reversible high energy phosphorylation reaction between ATP and AMP which associate with energetic metabolism and nucleic acid synthesis and signal transmission. This enzyme has three distinct domains: Core, AMP binding domain (AMPbd) and Lid domain (LID). The primary role of AMPbd and LID is associated with conformational changes due to flexibility of two domains. Three dimensional structure of human AK1 has not been confirmed and various mutation experiments have been done to determine the active sites. In this study, AK1R138A which is changed arginine[138] of LID domain with alanine[138] was made and conducted with NMR experiments, backbone dynamics analysis and mo-lecular docking dynamic simulation to find the cause of structural change and substrate binding site. Synthetic human muscle type adenylate kinase 1 (hAK1) and its mutant (AK1R138A) were re-combinded with E. coli and expressed in M9 cell. Expressed proteins were purified and finally gained at 0.520 mM hAK1 and 0.252 mM AK1R138A. Multinuclear multidimensional NMR experiments including HNCA, HN(CO)CA, were conducted for amino acid sequence analysis and signal assignments of $^1H-^{15}N$ HSQC spectrum. Our chemical shift perturbation data is shown LID domain residues and around alanine[138] and per-turbation value(0.22ppm) of valine[179] is consid-ered as inter-communication effect with LID domain and the structural change between hAK1 and AK1R138A.

• Journal of Broadcast Engineering
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• v.16 no.2
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• pp.207-215
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• 2011

A signal passed through multi-path channel suffers ISI(Inter-Symbol Interference) and severe distortions caused by channel delay spread and noise components at the SC-FDE(Single Carrier with Frequency Domain Equalizer) transmission. Conventional UW(Unique-Word) based SC-FDE iterative channel estimation improves channel estimation performance by smoothing estimated CIR(Channel Impulse Response) of the noise components outside the channel length at time domain and restoring the broken cyclic property through UW reconstruction. In this paper, we propose channel estimation scheme through noise suppression within channel length. To suppress the noise, we estimate noise standard deviation as estimated CIR of the noise components outside the channel length and make criteria of the noise standard deviation gain that doesn't affect the original signal samples. When estimated CIR samples within channel length are less than the criteria value using the noise standard deviation and gain, the noise components are removed. Simulation results show that the proposed channel estimation scheme brings good channel MSE(Mean Square Error) and good BER(Bit Error Rate) performance.

• The Journal of Korean Institute of Electromagnetic Engineering and Science
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• v.12 no.7
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• pp.1147-1156
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• 2001

In this paper, a new design architecture of radar signal processor in real time is proposed. It has been designed and implemented under the consideration to minimize the inter-processor communication overhead and to maintain the coherence in Doppler pulse domain and in range domain. Its structure can be easily reconfigured and reprogrammed in accordance with an addition of function algorithm or a modification of operational scenario. As we designed a task configuration for parallel processing from measures of computation time for function algorithms and transmission time for results by signal processing, data exchange between processors for performing of function algorithms could be fully removed. Morocco-2 board equipped ADSP-21060 processor of Analog Devices inc. and APEX-3.2 developed for SHARC DSP were used to construct the radar signal processor.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.33 no.6A
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• pp.676-684
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• 2008

In digital video broadcasting-terrestrial (DVB-T), which is the European digital terrestrial television standard, the orthogonal frequency division multiplexing (OFDM) has been adopted for signal transmission. The main reasons using OFDM are to increase the robustness against the frequency selective fading and impulse noise, and to use available bandwidth efficiently. However, channel variation within an OFDM symbol destroys orthogonality between subcarriers, resulting in inter-carrier interference (ICI), which increases an error floor in proportional to maximum Doppler spread. This paper provides an ICI analysis in both time and frequency domains while existing literatures analyze the ICI effects mainly in frequency domain and proposes the algorithms that estimate the channel impulse response and channel variation using least square (LS) algorithm which is the most simple channel estimation technique. And we propose adaptive channel estimation algorithm that estimates the velocity of terminals. The simulation results show that proposed algorithm has similar performance with about 1.5% computational complexity of noise and ICI reduction LS algorithm in low speed environments.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.36 no.3A
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• pp.189-197
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• 2011

OFDM systems are much studied for the recent high speed wireless optical communication system. OFDM system has basically high PAPR and ICI easily generated because of non-linearity and RF impairments. In the wireless optical communication system, optical output power driven by current of LED is not linear so that transmission signals are distorted. Therefore, research about reception performance of this nonlinear optical output emitted by non-linear LED transfer function and OFDM signal has been conducted. Nonlinear effect of LED is different from nonlinear effect of OFDM system in the conventional radio communication system, which degrades the BER performance. In this paper, we apply non-linear transfer function of recently studied LED into OFDM system. So, for reducing the PAPR and suppressing the ICI in frequency domain of receiver, we suggest a new PAPR reduction technique to reduce non-linear distortion of LED and an adaptive ICI suppression algorithm so that BER performance may be improved. Also, the proposed method is verified through simulation results.

• International Journal of Computer Science & Network Security
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• v.23 no.7
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• pp.1-8
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• 2023

An Orthogonal Frequency Division Multiplexing (OFDM) based wireless communication system has drawn wide attention for its high transmission rate and high spectrum efficiency in not only radio but also Underwater Acoustic (UWA) applications. Because of the narrow sub-carrier spacing of OFDM, orthogonality between sub-carriers is easily affected by Doppler effect caused by the movement of transmitter or receiver. Previously, Doppler compensation signal processing algorithm for Desired propagation path was proposed. However, other Doppler shifts caused by delayed Undesired signal arriving from different directions cannot be perfectly compensated. Then Receiver Bit Error Rate (BER) is degraded by Inter-Carrier-Interference (ICI) caused in the case of Multi-path Doppler channel. To mitigate the ICI effect, a modified Delay and Doppler Profiler (mDDP), which estimates not only attenuation, relative delay and Doppler shift but also sampling clock shift of each multi-path component, is proposed. Based on the outputs of mDDP, an ICI canceling multi-tap equalizer is also proposed. Computer simulated performances of one-tap equalizer with the conventional Time domain linear interpolated Channel Transfer Function (CTF) estimator, multi-tap equalizer based on mDDP are compared. According to the simulation results, BER improvement has been observed. Especially, in the condition of 16QAM modulation, transmitting vessel speed of 6m/s, two-path multipath channel with direct path and ocean surface reflection path; more than one order of magnitude BER reduction has been observed at CNR=30dB.

• Journal of the Institute of Convergence Signal Processing
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• v.19 no.3
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• pp.139-146
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• 2018

Underwater acoustic communication can be applied to various area such as scientific, commercial and military survey using Autonomous Underwater Vehicles and Unmanned Underwater Vehicles. Underwater communication is studying very actively by advanced country like United States. But differ from wireless communication in the air, underwater acoustic communication has some difficult problems, ISI(Inter Symbol Interference) due to multipath and limit of transmission bandwidth due to slow propagation of sound wave. In this paper, SC-FDE and OFDM transmission system for the cancellation of ISI in conjunction with underwater acoustic channel modeling are applied to the underwater simulation of communication. The performance of these methods in the simulation guide to possibility of adopting in underwater acoustic communication algorithm. For this purpose, we compare SER performance of SC-FDE with that of OFDM for modelled underwater channel. Underwater channel is generated by Bellhop model. Simulation results show above 5dB SNR gain at 10-3 SER. And it demonstrate SC-FDE is efficient method for underwater acoustic communication.