• Journal of Ecology and Environment
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• v.37 no.4
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• pp.231-244
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• 2014

A study on indigenous diatoms was carried out at 49 sites from November 2008 to December 2012 in the marine and brackish plankton and benthic ecosystem in Korea. The structure of small-sized pennate diatoms was examined by means of light and scanning electron microscopy. Twenty species of diatoms were newly identified and divided into five orders, 18 families, and nine genera in this study. The nomenclature, references, specimens examined, specimen descriptions, photographs, and distribution profiles are reported here. The newly reported pennate diatoms imply several reasons why these taxa have not been recorded previously in Korea and we present the strategy to understand the diversity of diatoms in Korea.

• Journal of Ecology and Environment
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• v.38 no.4
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• pp.545-562
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• 2015

A study on indigenous diatoms was carried out at 71 sites during the period from April 1999 to August 2014 in marine and fresh water in Korea. Forty species of diatoms are new to Korea and they are divided into three classes, six subclasses, 13 orders, 19 families, and 28 genera. The nomenclatures, references, dimensions, specimens examined, local habitat, distribution in Korea, and photograph are reported here. The 40 species found in marine and fresh water showed speciesspecific habitats.

• Korean Journal of Environmental Biology
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• v.35 no.3
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• pp.215-226
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• 2017

A study on indigenous diatoms was carried out at 10 sites from May 2014 to December 2016 in marine and freshwater in Korea. Seventeen species of diatoms are new to Korea and they are divided into 3 classes, 4 subclasses, 10 orders, 14 families, and 16 genera. The nomenclatures, references, dimensions, specimens examined, local habitat, distribution in Korea, and photograph are reported here. Seventeen species found in marine, freshwater, and brackish water showed species-specific habitats.

• Korean Journal of Environmental Biology
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• v.30 no.3
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• pp.245-271
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• 2012

A study on the indigenous diatoms was carried out at 103 sites during August 2008 to April 2011 from the marine and the brackish waters in Korea. A fine structure of small-sized diatoms was examined using a light and scanning electron microscopy. Sixty species of diatoms were newly identified and composed of 3 class, 6 subclass, 16 order, 21 family and 39 genus. The detailed nomenclatures, references, photographs and distributions were here reported. Of 60 species, the most frequent species was Tryblionella coarctata appearing 24 times, and 22 times followed by Thalassiosira lacustris, Cocconeis stauroneiformis was 20 times. In the level of genus, Chaetoceros, Parlibells and Thalassiosira were included 4 species, Actinocyclus, Minidiscus and Licmophora were included 3 species. This study will provide the knowledge of the diversity level of diatom in Korea, the knowledge is important on the diatoms for further studies.

• Journal of Marine Bioscience and Biotechnology
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• v.11 no.1
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• pp.14-22
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• 2019

Omega-3 fatty acids and carotenoids, which are known as representative high-value substances derived from microalgae, are being studied from various diatoms. Most of the diatoms contain fucoxanthin and omega-3 fatty acid. Fucoxanthin produced by diatom has been reported as bioactive compounds exhibiting strong antioxidant, anticancer and anti-inflammatory activities. However, the low growth rate and fucoxanthin content of diatoms are one of the big obstacles to the industrial application. In this study, indigenous marine diatom Achnanthidium sp. BS-001 was isolated for a candidate of fucoxanthin producer. Light intensity and temperature for the culture of Achnanthidium sp. BS-001 were optimized on PhotoBiobox. Optimization of silicate concentration for increasing BS-001 biomass productivity was confirmed in F/2 medium with various concentration of sodium silicate. As a result, condition of light intensity, temperature, and silicate concentration for optimal cultivation were $150{\mu}mol{\cdot}m^{-2}{\cdot}s^{-1}$, $18^{\circ}C$ and 0.106 mM, respectively. Maximum biomass productivity reaches to $154.3mg{\cdot}L^{-1}{\cdot}day^{-1}$, and then the content of omega-3 fatty acids and fucoxanthin were $19.4mg{\cdot}g^{-1}$, $9.05mg{\cdot}g^{-1}$, respectively. These results indicate that Achnanthidium sp. BS-001 has the potential to be used as a source of omega-3 fatty acids and fucoxanthin.

• Korean Journal of Environmental Biology
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• v.35 no.4
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• pp.604-621
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• 2017

This research was conducted to find the indigenous diatom species unrecorded in Korea from February to December 2016. The samples were taken at 28 sites of the coastal regions on the west coast of Korea and Jeju Island. Diatoms were collected mostly from sand and mud of tidal flats, including gravel, seaweed on the bottom and macrophytes floating in the seawater. Diatom specimens were observed by means of light and scanning electron microscopy. Twenty one species were discovered and added as new specimens to the Korean diatom flora, which are divided into 9 orders, 12 families, and 16 genera. The list and photographs of the species are included with the description of the morphological characteristics and distribution in Korea.

• Ocean and Polar Research
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• v.28 no.1
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• pp.57-65
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• 2006

Various marine plankton were observed in the ballast water of vessels entering Incheon and Busan harbors. The ballast water of which age ranged from 2 to 54 days originated from the coastal waters of New Zealand, Taiwan, Singapore, Japan, Hong Kong and Pakistan, and from the Pacific Ocean. The total number of marine plankton taxa in 9 ballast tanks of different ships was 170: 90 phytoplankton, 24 protozoa and 56 zooplankton. The most diverse taxonomic groups were diatoms in phytoplankton, ciliates in protozoa and copepods in zooplankton. Classifying the specimens by size, above 50% of the number species of phytoplankton belonged to the size range between 50 and 150 Un. Protozoa and metazooplankton were found frequently in the size range between 50 and $120{\mu}m$ and 500 and $1,000{\mu}m$, respectively. The relationship between the species number and the age of ballast water was not significant. This is because of difference of filtration amounts derived from discordance of collecting samples. Among plankton observed in ballast water, some harmful algae and non-indigenous aquatic species were identified. Therefore, we need to investigate whether these species can inhabit in Korean coastal waters in further study.

• Journal of Marine Bioscience and Biotechnology
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• v.10 no.1
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• pp.26-33
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• 2018

Fucoxanthin has been reported as bioactive compounds exhibiting strong antioxidant, anticancer and anti-inflammatory activities. Owing to its a wide range of applications and potentials, commercial production of fucoxanthin from algae has been attracted many attentions. Although, most of seaweeds and diatoms contain fucoxanthin as major carotenoid contents, low productivity of fucoxanthin still hinder the industrial application. Here, we newly isolated and identified indigenous marine diatom Odontella sp. BS-003 as a resource of fucoxanthin production. The characterization, optimization and production of the fucoxanthin, along with other bioactive compound omega-3 fatty acid from odontella sp. BS-003 were analyzed in this study, and the results represented optimal culture condition (two-fold silicate containing F/2 medium) significantly enhanced the algal biomass productivity. The maximum biomass (1.83 g/L), fucoxanthin (3.88 mg/g), along with omega-3 fatty acid (10 %, w/w) were obtained from the 10 L of photobioreactor. Based on the results, it is speculated that the microalga Odontella sp. BS-003 can be a promising natural resource for the production of bioactive compounds.

• Ocean and Polar Research
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• v.31 no.4
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• pp.349-357
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• 2009

Ballast water is widely recognized as a serious environmental problem due to the risk of introducing non-indigenous aquatic species. In this study we aimed to investigate measures which can minimize the transfer of aquatic organisms from ballast water. Securing more reliable technologies to determine the viability of aquatic organisms is an important initiative in ballast water management systems. To evaluate the viability of marine phytoplankton, we designed the staining methods of fluorescein diacetate (FDA) and Calcein-AM assay on each target species belonging to different groups, such as bacillariphyceae, dinophyceae, raphidophyceae, chrysophyceae, haptophyceae and chlorophyceae. The FDA method, which is based on measurements of cell esterase activity using a fluorimetric stain, was the best dye for determining live cells of almost all phytoplankton species, except several diatoms tested in this study. On the other hand, although fluorescence of Calcein-AM was very clear for a comparatively longer time, green fluorescence per cell volume was lacking in most of the tested species. According to the Flow CAM method, which is a continuous imaging technique designed to characterize particles, green fluorescence values of stained cells by FDA were significantly higher than those of Calcein-AM treatments and control, implying that the Flow CAM using FDA assay could be adapted as an important tool for distinguishing living cells from dead cells. Our results suggest that the FDA and Calcein-AM methods can be adapted for use on phytoplankton, though species-specific characters are greatly different from one organism to another.