• Title/Summary/Keyword: high-resolution melting

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Study on Synthesis of Tricalciumaluminate Clinker by Hydrate-burning Method (수화물 소성법에 의한 알루민산삼칼슘 클링커의 합성에 관한 연구)

  • Ki, Tae Kyung;Song, Tae Woong
    • Journal of the Korean Ceramic Society
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    • v.44 no.9
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    • pp.517-523
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    • 2007
  • For the preparation of tricalciumaluminate $(C_3A)$ clinker, in traditional clinkering method using oxides and carbonates as a raw material, uneconomical repetition of burning have been necessary to avoid the melting of clinker by eutectic reaction in the system $CaO-Al_2O_3$. In this study, special starting raw materials for the clinker burning were prepared from a mixture of oyster shell and aluminium hydroxide by heating to $1100^{\circ}C$ and hydrating at $30^{\circ}C$. The starting raw materials, hardened body with weak hydraulic strength, were mainly composed of $C_3AH_6$ formed by resolution-precipitation mechanism of the system $CaO-Al_2O_3-H_2O$. By heating them, relatively pure $C_3A$ clinker could be obtained by one-time burning at the fairly lower temperature than that of conventional method. The easier formation of $C_3A$ clinker seemed to be caused by higher compositional homogeneity and stoichiometry of the starting materials, high surface area and crystallographic instability of the thermally decomposed products, and the catalytic effect of decomposed moisture on the early-stage crystallization of calciumaluminates. The basic hydration behavior of the clinker was also confirmed.

Development of SNP marker set for marker-assisted backcrossing (MABC) in cultivating tomato varieties

  • Park, GiRim;Jang, Hyun A;Jo, Sung-Hwan;Park, Younghoon;Oh, Sang-Keun;Nam, Moon
    • Korean Journal of Agricultural Science
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    • v.45 no.3
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    • pp.385-400
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    • 2018
  • Marker-assisted backcrossing (MABC) is useful for selecting offspring with a highly recovered genetic background for a recurrent parent at early generation unlike rice and other field crops. Molecular marker sets applicable to practical MABC are scarce in vegetable crops including tomatoes. In this study, we used the National Center for Biotechnology Information- short read archive (NCBI-SRA) database that provided the whole genome sequences of 234 tomato accessions and selected 27,680 tag-single nucleotide polymorphisms (tag-SNPs) that can identify haplotypes in the tomato genome. From this SNP dataset, a total of 143 tag-SNPs that have a high polymorphism information content (PIC) value (> 0.3) and are physically evenly distributed on each chromosome were selected as a MABC marker set. This marker set was tested for its polymorphism in each pairwise cross combination constructed with 124 of the 234 tomato accessions, and a relatively high number of SNP markers polymorphic for the cross combination was observed. The reliability of the MABC SNP set was assessed by converting 18 SNPs into Luna probe-based high-resolution melting (HRM) markers and genotyping nine tomato accessions. The results show that the SNP information and HRM marker genotype matched in 98.6% of the experiment data points, indicating that our sequence analysis pipeline for SNP mining worked successfully. The tag-SNP set for the MABC developed in this study can be useful for not only a practical backcrossing program but also for cultivar identification and F1 seed purity test in tomatoes.

BRCA1 Gene Mutation Screening for the Hereditary Breast and/or Ovarian Cancer Syndrome in Breast Cancer Cases: a First High Resolution DNA Melting Analysis in Indonesia

  • Mundhofir, Farmaditya EP;Wulandari, Catharina Endah;Prajoko, Yan Wisnu;Winarni, Tri Indah
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.3
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    • pp.1539-1546
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    • 2016
  • Specific patterns of the hereditary breast and ovarian cancer (HBOC) syndrome are related to mutations in the BRCA1 gene. One hundred unrelated breast cancer patients were interviewed to obtain clinical symptoms and signs, pedigree and familial history of HBOC syndrome related cancer. Subsequently, data were calculated using the Breast and Ovarian Analysis of Disease Incidence and Carrier Estimation Algorithm (BOADICEA) risk prediction model. Patients with high score of BOADICEA were offered genetic testing. Eleven patients with high score of BOADICEA, 2 patients with low score of BOADICEA, 2 patient's family members and 15 controls underwent BRCA1 genetic testing. Mutation screening using PCR-HRM was carried out in 22 exons (41 amplicons) of BRCA1 gene. Sanger sequencing was subjected in all samples with aberrant graph. This study identified 10 variants in the BRCA1 gene, consisting of 6 missense mutations (c.1480C>A, c.2612C>T, c.2566T>C, c.3113A>G, c.3548 A>G, c.4837 A>G), 3 synonymous mutations (c.2082 C>T, c.2311 T>C and c.4308T>C) and one intronic mutation (c.134+35 G>T). All variants tend to be polymorphisms and unclassified variants. However, no known pathogenic mutations were found.

Study on Recycling of Refractory Materials from High-Temperature Melting Furnace by Color Sorting Technology (색상선별(色相選別) 기술(技術)을 이용(利用)한 고온(高溫) 용융노(熔融爐) 이화재(而火材) 재활용(再活用)에 관(關)한 연구(硏究))

  • Seo, Kang-Il;Lee, Deok-Hee;Choi, Woo-Zin;Jang, Jung-Hoon;Park, Eun-Kyu;Oh, Young-Gil
    • Resources Recycling
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    • v.20 no.1
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    • pp.28-36
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    • 2011
  • More than 50% of refractory materials generated from high-temperature melting furnace was not carbonized and could be recycled by adopting proper separation process. In the present work, the separation of refractory materials has studied by adopting color sorting technology to promote the recycling of waste refractory. Purity of the refractory materials was obtained with at 97.2%, color temperature of sorter light source 6,500K, which gives less interference of surrounding light source. Purity and separation efficiency were improved as size is setting bigger and lower conveyer belt speed. It is revealed that optimum conditions were color temperature 6,500K, conveyer belt speed 1,000 mm/sec, particle size -20 mm, etc. To improve purity and separation efficiency on below 10mm size, the resolution of should be fixed camera and it narrow recognition range. As a result of the study, color sorting technology could be used for separation of waste refractory materials and will contribute to promote the waste recycling.

A Study on the Development of a High Resolution Snow Gauge (정밀 강설량계 개발을 위한 연구)

  • Lee, Bu-Yong
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.8 no.4
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    • pp.270-274
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    • 2006
  • This study proposes a new method for automatic recording of snowfall by a mass unit which is required in weather forecast and hydrology research. In this method the weight of a buoyancy bar submerged in a liquid is measured by a strain-gauge loadcell. Field test results of the strain-gauge loadcell showed good stability as well as high accuracy. Indoor tests of the instrument using a large tank of 120 cm diameter and 25 cm height connected to a small tank measured the liquid level with a good stability, showing a measurement error of less than 0.1 mm in a 100 mm range. This method of water depth measurement is very useful in measuring snowfall because it has no limitation on the funnel size of the instrument. In addition, an antifreezing solution instead of water used in the tank makes a heating system for melting snow unnecessary.

Involvement of CELSR3 Hypermethylation in Primary Oral Squamous Cell Carcinoma

  • Khor, Goot Heah;Froemming, Gabrielle Ruth Anisah;Zain, Rosnah Binti;Abraham, Thomas Mannil;Lin, Thong Kwai
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.1
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    • pp.219-223
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    • 2016
  • Background: Promoter hypermethylation is a frequent epigenetic mechanism for gene transcription repression in cancer and is one of the hallmarks of the disease. Cadherin EGF LAG seven-pass G-type receptor 3 (CELSR3) contributes to cell contact-mediated communication. Dysregulation of promoter methylation has been reported in various cancers. Objectives: The objectives of this study were to investigate the CELSR3 hypermethylation level in oral squamous cell carcinomas (OSCCs) using methylation-sensitive high-resolution melting analysis (MS-HRM) and to correlate CELSR3 methylation with patient demographic and clinicopathological parameters. Materials and Methods: Frozen tissue samples of healthy subjects' normal mucosa and OSCCs were examined with regard to their methylation levels of the CELSR3 gene using MS-HRM. Results: MS-HRM analysis revealed a high methylation level of CELSR3 in 86% of OSCC cases. Significant correlations were found between CELSR3 quantitative methylation levels with patient ethnicity (P=0.005), age (P=0.024) and pathological stages (P=0.004). A moderate positive correlation between CELSR3 and patient age was also evident (R=0.444, P=0.001). Conclusions: CELSR3 promoter hypermethylation may be an important mechanism involved in oral carcinogenesis. It may thus be used as a biomarker in OSCC prognostication.

Applications of molecular markers in the discrimination of Panax species and Korean ginseng cultivars (Panax ginseng)

  • Jo, Ick Hyun;Kim, Young Chang;Kim, Dong Hwi;Kim, Kee Hong;Hyun, Tae Kyung;Ryu, Hojin;Bang, Kyong Hwan
    • Journal of Ginseng Research
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    • v.41 no.4
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    • pp.444-449
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    • 2017
  • The development of molecular markers is one of the most useful methods for molecular breeding and marker-based molecular associated selections. Even though there is less information on the reference genome, molecular markers are indispensable tools for determination of genetic variation and identification of species with high levels of accuracy and reproducibility. The demand for molecular approaches for marker-based breeding and genetic discriminations in Panax species has greatly increased in recent times and has been successfully applied for various purposes. However, owing to the existence of diverse molecular techniques and differences in their principles and applications, there should be careful consideration while selecting appropriate marker types. In this review, we outline the recent status of different molecular marker applications in ginseng research and industrial fields. In addition, we discuss the basic principles, requirements, and advantages and disadvantages of the most widely used molecular markers, including restriction fragment length polymorphism, random amplified polymorphic DNA, sequence tag sites, simple sequence repeats, and single nucleotide polymorphisms.

Experimental Study on Structure Characteristics of Particulate Matter emitted from Ship at Various Sampling Conditions (다양한 샘플링 조건에 따른 선박 배기가스 내 입자상물질의 구조 특성에 관한 실험 연구)

  • Lee, Won-Ju;Jang, Se-Hyun;Kim, Sung-Yoon;Kang, Mu-Kyoung;Chun, Kang-Woo;Cho, Kwon-Hae;Yoon, Seok-Hun;Choi, Jae-Hyuk
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.22 no.5
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    • pp.547-553
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    • 2016
  • Black carbon (BC) contained in particulate matter (PM) originating from the exhaust gases of ships' diesel engines has been receiving great attention as a cause of glacial melting and warming in the polar regions. In this study, we took samples from various locations of PM emitted from the training ship (T/S) HANBADA's main engine, in cooperation with the Korea Maritime and Ocean University. We analyzed the structure and characteristics of these samples using high-resolution transmission electron microscopy (HR-TEM) and applied our findings as fundamental research for developing PM reduction technology. We also employed our results to determine appropriate preemptive action to meet upcoming PM/BC regulations. In addition, we confirmed the emission trend of pollutants from exhaust gases under various engine operating conditions using an exhaust gas analyzer. Results obtained from the analysis of HR-TEM images showed that the structure of the PM is chain-like wispy agglomerates consisting of a number of individual spherical particles. As the sampling location was moved away from the turbo charger (T/C) towards the funnel, more condensates were observed at a low temperature and the molecular structure of the PM lost its characteristic BC structure as an amorphous structure gradually appeared. Furthermore, through the analysis of exhaust gases, we predicted a decrease in PM concentration in the exhaust stream as engine rpm increase.

Development of a SNP marker set related to crown gall disease in grapevines by a genome wide association study

  • Kim, Dae-Gyu;Jang, Hyun A;Lim, Dong Jun;Hur, Youn Young;Lee, Kyo-Sang;Min, Jiyoung;Oh, Sang-Keun
    • Korean Journal of Agricultural Science
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    • v.47 no.3
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    • pp.693-705
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    • 2020
  • Grapes (Vitis spp. L.) are the third most produced fruit in the world. Crown gall disease caused by Agrobacterium vitis forms galls in the stems of the grapevines and reduces the vitality of the fruit trees, resulting in reduced yields. This pathogen has occurred in vineyards worldwide and caused serious economic losses. It is a soil-borne disease, so Agrobacterium vitis can survive for several years in vineyards and is difficult to control. Additionally, since there is no effective chemical control method, the most effective control method is the breeding of resistant varieties. To make the resistant variety, marker-assisted selection (MAS) enables fast breeding with low cost. In this study, we applied a genome-wide association study (GWAS), by combining phenotyping and genotyping-by-sequencing (GBS), for the development of a single nucleotide polymorphism (SNP) marker set related to crown gall disease using 350 grapevine varieties. As a result of the GBS based genotyping analysis, about 58,635 SNPs were obtained. In addition, the phenotypic analysis showed 35.2% resistance, 73% moderate susceptibility and 16.4% highly susceptibility. Moreover, after confirmation, two genes (VvARF4 and VvATL6-like) were shown to be related to crown gall disease based on the results of GWAS analysis, using the phenotypic data, and GBS. High-resolution melting analysis (HRMA) was performed using the Luna® Universal Probe with real-time PCR to distinguish the melting peaks of the resistant and susceptible varieties. Our data show that these SNP markers are expected to be helpful in evaluating resistance against grapevine crown gall disease and in breeding.

Mesoscale Characteristics of Frontal System on Redar Data (레이더 자료에 나타난 전선성 강수계의 중규모적 특성 분석)

  • Jeong, Yeong-Seon;Im, Eun-Ha;Nam, Jae-Cheol
    • Journal of Korea Water Resources Association
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    • v.33 no.2
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    • pp.219-227
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    • 2000
  • In Korea, heavy rainfall is mainly induced by the Changma front or frontal system passed over Korea periodically. Both its unknown mesoscale characteristics and the lack of direct measurements make it difficult to predict precipitation reasonably. To understand its 3-dimensional structure, initiation and development mechanism of precipitation in that system will be very helpful to forecast it more accurately. A meteorological radar is specially useful because it produces direct measurement with high resolution in time and space. In this study, representative frontal system is selected and analyzed specially focused on its vertical structure using radar data. Results shows that there are convective cells with horizontal scale of 10 - 20 km in precipitation system. Melting layer located between 3 and 5 km height, maximum fall speeds of rain drops were seen just below bright band.

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