• Title/Summary/Keyword: helical structure

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Thermotropic Liquid Crystalline Behavior of Hydroxypropyl Celluloses Bearing Cholesteryl and Nitroazobenzene Groups (콜레스테릴과 니트로아조벤젠 그룹을 지닌 히드록시프로필 셀룰로오스들의 열방성 액정 거동)

  • Jeong, Seung-Yong;Ma, Yung-Dae
    • Polymer(Korea)
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    • v.32 no.5
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    • pp.446-457
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    • 2008
  • Three kinds of hydroxypropyl cellulose (HPC) derivatives: 6- (cholesteryloxycarbonyl) pentoxypropyl celluloses(CHPCs) with degree of esterification(DE) ranging from 0.6 to 3, 6-[4-{4'-(nitrophenylazo)phenoxycarbonyl}] pentoxypropyl celluloses (NHPCs) with DE ranging from 0.4 to 3, and fully 6-(cholesteryloxycarbonyl) pentanoated NHPCs (CNHPCs) were synthesized, and their thermotropic liquid crystalline properties were investigated. All the CHPCs and NHPCs with $DE{\leq}1.7$ formed enantiotropic cholesteric phases, whereas CNHPCs with 6-(cholesteryloxycarbonyl) pentanoyl DE(DEC) more than 1.6 exhibited monotropic cholesteric phases. On the other hand, NHPCs with $DE{\geq}2.4$ and CNHPCs with $DEC{\leq}1.3$ showed monotropic nematic phases. NHPCs with $DE{\leq}l$, as well as HPC, formed right-handed helices whose optical pitches (${{\lambda}_m}'s$) increase with temperature, while all the CHPCs formed left-handed helices whose ${{\lambda}_m}'s$ decrease with temperature. In contrast with these derivatives, NHPCs with $1.4{\leq}DE{\leq}1.7$ and CNHPCs with $DEC{\geq}1.6$ did not display reflection colors over the full cholesteric range, suggesting that the helical twisting power of the cellulose chain and the cholesteryl group highly depends on the chemical structure and DE of mesogenic group.

Construction and Characterization of Vitreoscilla Hemoglobin (VHb) with Enhanced Peroxidase Activity for Efficient Degradation of Textile Dye

  • Zhang, Zidong;Li, Wei;Li, Haichao;Zhang, Jing;Zhang, Yuebin;Cao, Yufeng;Ma, Jianzhang;Li, Zhengqiang
    • Journal of Microbiology and Biotechnology
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    • v.25 no.9
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    • pp.1433-1441
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    • 2015
  • Pollution resulting from the discharge of textile dyes into water systems has become a major global concern. Because peroxidases are known for their ability to decolorize and detoxify textile dyes, the peroxidase activity of Vitreoscilla hemoglobin (VHb) has recently been studied. It is found that VHb and variants of this enzyme show great promise for enzymatic decolorization of dyes and may play a role in achieving their successful removal from industrial wastewater. The level of VHb peroxidase activity correlates with two amino acid residues present within the conserved distal pocket, at positions 53 and 54. In this work, sitedirected mutagenesis of these residues was performed and resulted in improved VHb peroxidase activity. The double mutant, Q53H/P54C, shows the highest dye decolorization and removal efficiency, with 70% removal efficiency within 5 min. UV spectral studies of Q53H/P54C reveals a more compact structure and an altered porphyrin environment (λSoret = 413 nm) relative to that of wild-type VHb (λSoret = 406), and differential scanning calorimetry data indicate that the VHb variant protein structure is more stable. In addition, circular dichroism spectroscopic studies indicate that this variant's increased protein structural stability is due to an increase in helical structure, as deduced from the melting temperature, which is higher than 90℃. Therefore, the VHb variant Q53H/P54C shows promise as an excellent peroxidase, with excellent dye decolorization activity and a more stable structure than wild-type VHb under high-temperature conditions.

Conformation and Biological Activity of the Neuropeptide $\gamma$ (Neuropeptide $\gamma$의 구조 및 생리활성)

  • Ku Hee-Jung;SEO Jung-Kil;KIM Eun-Hi;HUH Min-Do;CHUNG Joon-Ki;PARK Jang-Su;KANG Shin-Won;PARK Nam Gyu
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.30 no.2
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    • pp.244-251
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    • 1997
  • The relationship between structure and biological activity was studied on the three neuropeptides (mammalian, trout- and goldfish-neuropeptide $\gamma$) that were syntheized by the solid-phase method. Circular dichroism spectra showed that mammalian, trout- and goldfish-neuropeptide $\gamma$ adopted an unordered structure in buffer solution. In the-presence of neutral and acidic liposomes, mammalian and trout-neuropeptioe $\gamma$ also took a random structure. However, goldfish-neuropeptide $\gamma$ took an $\alpha-helical$ structure in acidic liposomes. The intestinal motility response was investigated with carp intestines, guinea-pig ileums and rat duodenums. In case of carp intestine, contractile activity was as follows : goldfish-neuropeptide $\gamma\simeq$ trout-neuropeptide $\gamma>$ mammalian-neuropeptide $\gamma$, On the other hand, the contractile activity of mammalian-neuropeptide $\gamma$ was more potent than trout- and goldfish-neuropeptide $\gamma$ in the guinea-pig ileums and rat duodenums. These results suggest that neuropeptide $\gamma$ show the species-specific activity.

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Morphological Characteristics of Sperm in the Korean Striped Field Mouse, Apodemus agrarius coreae: Possible Role of Sperm Neck in the Movement of Sperm Head

  • Lee, Jeong-Hun;Son, Seong-Won
    • Animal cells and systems
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    • v.1 no.2
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    • pp.371-379
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    • 1997
  • To investigate the movement of sperm head and the role of sperm neck in forward sperm motility in the Korean striped field mouse, Apodemus agrarius coreae, the morphological characteristics of the cauda epididymal spermatozoa were examined by light microscopy and scanning and transmission electron microscopy. Spermatozoa of A. agrarius coreae were characterized by the conspicuous shape of the acrosome and the long tail compared with those of other rodents. Total length of the sperm was $133\mu{m}$. The sperm head had a curved falciform shape. The head was 8.0${\mu}$m in length, and about 4.0 ${\mu}$m in width. The shape of acrosome had an openerlike form. The sperm tail (125 ${\mu}$m) consisted of four major segments: neck (0.5 ${\mu}$m), middle piece (29.5 ${\mu}$m), and principal piece plus the end piece (95 ${\mu}$m). The outer dense fibers were arranged in a horseshoe fashion, and No. 1, 5, 6, and 9 of the outer dense fibers were larger than the others. The mitochondrial bundles of middle piece were composed of a pair of arms, which surrounded the axone of the middle piece by the 45 0 angled helical structure. The total number of mitochondrial gyres was 188. In particular, the microfilament structures existed in plasma membrane of the sperm, which was adjacent to the acrosomal region on the nuclear membrane. The segmented columns were surrounded by microfilament structures, and the microfilament bundles were adjacent to the outer membrane of the first mitochondria of middle piece. This study presents for the first time the existence of microfilament structures within the plasma membrane of sperm which is located from the adjacent acrosome region to the connecting piece in sperm neck of Korean striped field mouse, Apodemus agrarius coreae. The present result suggests that the constriction and extension of microfilament in sperm neck as well as the wave-movement of sperm tail may play a role in the movement of sperm head.

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Noise Source Identification of Electric Parking Brake by Using Noise Contribution Analysis and Identifying Resonance of Vehicle System (차량 시스템의 소음 기여도분석 및 공진 규명을 통한 전자식 주차 브레이크 소음원 규명)

  • Park, Goon-Dong;Seo, Bum-June;Yang, In-Hyung;Jeong, Jae-Eun;Oh, Jae-Eung;Lee, Jung-Youn
    • Transactions of the Korean Society of Automotive Engineers
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    • v.20 no.3
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    • pp.119-125
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    • 2012
  • Caliper intergrated Electric Parking Brake (EPB) is an automatic parking brake system, attached to rear caliper. Because EPB uses luxury vehicles recently, the drivers of vehicles are sensitive to the EPB noise. EPB is operated by the motor and gear, so noise is generated by motor and gear. In order to reduce noise, One of EPB manufacturers uses helical gear and changes the shape of EPB housing. But these methods are not optimized for reduction of interior noise. There are many noise transfer paths into vehicle interior and it is difficult to identify the noise sources. Therefore, in this study, we performed contribution analysis and modal testing in the vehicle system. It is possible to distinguish between air-borne noise and structure-borne noise in the vehicle interior noise by comparing interior noise peak with resonance mode map.

Biophysical Studies Reveal Key Interactions between Papiliocin-Derived PapN and Lipopolysaccharide in Gram-Negative Bacteria

  • Durai, Prasannavenkatesh;Lee, Yeongjoon;Kim, Jieun;Jeon, Dasom;Kim, Yangmee
    • Journal of Microbiology and Biotechnology
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    • v.28 no.5
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    • pp.671-678
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    • 2018
  • Papiliocin, isolated from the swallowtail butterfly (Papilio xuthus), is an antimicrobial peptide with high selectivity against gram-negative bacteria. We previously showed that the N-terminal helix of papiliocin (PapN) plays a key role in the antibacterial and anti-inflammatory activity of papiliocin. In this study, we measured the selectivity of PapN against multidrug-resistant gram-negative bacteria, as well as its anti-inflammatory activity. Interactions between Trp2 of PapN and lipopolysaccharide (LPS), which is a major component of the outer membrane of gram-negative bacteria, were studied using the Trp fluorescence blue shift and quenching in LPS micelles. Furthermore, using circular dichroism, we investigated the interactions between PapN and LPS, showing that LPS plays critical roles in peptide folding. Our results demonstrated that Trp2 in PapN was buried deep in the negatively charged LPS, and Trp2 induced the ${\alpha}$-helical structure of PapN. Importantly, docking studies determined that predominant electrostatic interactions of positively charged arginine residues in PapN with phosphate head groups of LPS were key factors for binding. Similarly, hydrophobic interactions by aromatic residues of PapN with fatty acid chains in LPS were also significant for binding. These results may facilitate the development of peptide antibiotics with anti-inflammatory activity.

LN2 storage test and damage analysis for a Type 3 cryogenic propellant tank (타입 3 극저온 추진제 탱크의 액체질소저장 시험 및 파손 분석)

  • Kang, Sang-Guk;Kim, Myung-Gon;Park, Sang-Wuk;Kong, Cheol-Won;Kim, Chun-Gon
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.35 no.7
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    • pp.592-600
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    • 2007
  • Nowadays, researches for replacing material systems for cryotanks by composites have been being performed for the purpose of lightweight launch vehicle. In this paper, a type 3 propellant tank, which is composed of the composite developed for cryogenic use and an aluminum liner, was fabricated and tested considering actual operating environment, that is, cryogenic temperature and pressure. For this aim, liquid nitrogen (LN2) was injected into the fabricated tank and in turn, gaseous nitrogen (GN2) was used for pressurization. During this test procedure, strains and temperatures on the tank surface were measured. The delamination between hoop layer and helical one, was detected during the experiment. Several attempts were followed to investigate the cause analytically and experimentally. Thermo-elastic analysis in consideration of the progressive failure was done to evaluate the failure index. Experimental approach through a LN2 immersion test of composite/aluminum ring specimens suitable for simulating the Type 3 tank structure.

Electron Microscopic Studies on the Morphological Differences of Ethnic Hair (인종 모발의 형태학적 차이에 관한 전자현미경적 연구)

  • Lee, Gui-Young;Chang, Byung-Soo
    • Applied Microscopy
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    • v.38 no.3
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    • pp.265-273
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    • 2008
  • We investigated the morphological differences of the ethnic hairs using scanning electron microscopy and transmission electron microscopy, sampled from African, Asian and Caucasian women. Transverse section of African hair had a highly elliptical type whereas those of Asian and Caucasian hairs had circular and elliptical types, respectively. The diameter of African hair showed wide variations from 90 to 115 ${\mu}m$. The diameter of Asian hair was 100 ${\mu}m$ and Caucasian hair had a lesser diameter of 80 ${\mu}m$ on average. African hair were much more damaged in cuticle layer compared with Asian or Caucasian hairs. In particular, endocuticle of cuticle cell had a lot of holes in it, which resulted that it tends to be easily broken. Phaeomelanin in the cortex of Caucasian hair had a concentrically helical structure in it.

Unfolding of Ervatamin C in the Presence of Organic Solvents: Sequential Transitions of the Protein in the O-state

  • Sundd, Monica;Kundu, Suman;Dubey, Vikash Kumar;Jagannadham, Medicherla V.
    • BMB Reports
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    • v.37 no.5
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    • pp.586-596
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    • 2004
  • The folding of ervatamin C was investigated in the presence of various fluorinated and non-fluorinated organic solvents. The differences in the unfolding of the protein in the presence of various organic solvents and the stabilities of O-states were interpreted. At pH 2.0, non-fluorinated alkyl alcohols induced a switch from the native $\alpha$-helix to a $\beta$-sheet, contrary to the $\beta$-sheet to $\alpha$-helix conversion observed for many proteins. The magnitude of ellipticity at 215 nm, used as a measure of $\beta$-content, was found to be dependent on the concentration of the alcohol. Under similar conditions of pH, fluorinated alcohol enhanced the intrinsic a-helicity of the protein molecule, whereas the addition of acetonitrile reduced the helical content. Ervatamin C exhibited high stability towards GuHCl induced unfolding in different O-states. Whereas the thermal unfolding of O-states was non-cooperative, contrary to the cooperativity seen in the absence of the organic solvents under similar conditions. Moreover, the differential scanning calorimetry endotherms of the protein acquired at pH 2.0 were deconvoluted into two distinct peaks, suggesting two cooperative transitions. With increase in pH, the shape of the thermogram changed markedly to exhibit a major and a minor transition. The appearance of two distinct peaks in the DSC together with the non-cooperative thermal transition of the protein in O-states indicates that the molecular structure of ervatamin C consists of two domains with different stabilities.

Identification of Antimicrobial Peptide Hexamers against Oral Pathogens through Rapid Screening of a Synthetic Combinatorial Peptide Library

  • Song, Je-Seon;Cho, Kyung Joo;Kim, Joungmok;Kim, Jeong Hee
    • International Journal of Oral Biology
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    • v.39 no.4
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    • pp.169-176
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    • 2014
  • A positional scanning synthetic peptide combinatorial library (PS-SCL) was screened in order to identify antimicrobial peptides against the cariogenic oral bacteria, Streptococcus mutans. Activity against Streptococcus gordonii and Aggregatibacter actinomycetemcomitans was also examined. The library was comprised of six sub-libraries with the format $O_{(1-6)}XXXXX-NH_2$, where O represents one of 19 amino acids (excluding cysteine) and X represents equimolar mixture of these. Each sub-library was tested for antimicrobial activity against S. mutans and evaluated for antimicrobial activity against S. gordonii and A. actinomycetemcomitans. The effect of peptides was observed using transmission electron microscopy (TEM). Two semi-mixture peptides, RXXXXN-$NH_2$ (pep-1) and WXXXXN-$NH_2$ (pep-2), and one positioned peptide, RRRWRN-$NH_2$ (pep-3), were identified. Pep-1 and pep-2 showed significant antimicrobial activity against Gram positive bacteria (S. mutans and S. gordonii), but not against Gram negative bacteria (A. actinomycetemcomitans). However, pep-3 showed very low antimicrobial activity against all three bacteria. Pep-3 did not form an amphiphilic ${\alpha}$-helix, which is a required structure for most antimicrobial peptides. Pep-1 and pep-2 were able to disrupt the membrane of S. mutans. Small libraries of biochemically-constrained peptides can be used to generate antimicrobial peptides against S. mutans and other oral microbes. Peptides derived from such libraries may be candidate antimicrobial agents for the treatment of oral microorganisms.