• Title/Summary/Keyword: gut

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A report of 34 unrecorded bacterial species in Korea, belonging to the Actinobacteria

  • Ko, Kwan Su;Cha, Chang-Jun;Im, Wan-Taek;Kim, Seung-Bum;Seong, Chi-Nam;Bae, Jin-Woo;Jahng, Kwangyeop;Cho, Jang-Cheon;Joh, Ki-seong;Lee, Soon Dong
    • Journal of Species Research
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    • v.6 no.1
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    • pp.1-14
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    • 2017
  • As a subset study to discover indigenous prokaryotic species in Korea in 2014, a total of 34 bacterial strains assigned to the phylum Actinobacteria were isolated from various environmental samples collected from activate sludge, biotite, freshwater, gut of marine organisms, mud flat, sediment, soil, spent mushroom compost and sea water. On the basis of high 16S rRNA gene sequence similarity and a tight phylogenetic association with the closest species, it was revealed that each strain was assigned to independent and previously described bacterial species, with the exception of one isolate. There is no official report that these 34 species included in the phylum Actinobacteria have been described in Korea: 6 species of 5 genera in the order Corynebacteriales, 1 species of 1 genus in the order Frankiales, 2 species of 2 genera in the Micromonosporales, 14 species of 10 genera in Micrococcales, 2 species of 2 genera in the Propionibacteriales, 1 species of 1 genus in the Pseudonocardiales, 4 species of 2 genera in the Streptomycetales, 2 species of 2 genera in the Streptosporangiales and 1 species of 1 genus in the Solirubrobacterales. Gram reaction, cell and colony morphology, pigmentation, physiological characteristics, isolation sources and strain IDs are described in the section of species description.

Degradation capability of macromolecular organic matters and antimicrobial activities of Bacillus species isolated from surf clam (Tresus keenae) (왕우럭(Tresus keenae)에서 분리된 Bacillus species의 고분자 유기물질 분해능력과 항균활성)

  • Yi, Seung-Won;Moon, Sung-Hyun;Cho, Ho-Seong;Kim, Chul-Won
    • Korean Journal of Veterinary Service
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    • v.40 no.4
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    • pp.265-275
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    • 2017
  • The production of enzymes that help digestion, assimilation of essential nutrients, and prevent pathogenic bacteria are important for probiotics used in aquaculture. The objective of this study was to investigate enzyme activities for macromolecular organic matters and antimicrobial properties of the selected potential probiotics isolated from gut of surf clam (Tresus keenae) against well-known shellfish-pathogenic bacteria. Among 65 isolates from guts of 60 surf clams, seven Bacillus strains with outstanding degradation capability of macromolecule organic matter were selected as potential probiotics as follows: TKI01 (B. vietnamensis), TKI02, TKI26 (B. thuringiensis), TKI14, TKI32, TKI42 (B. amyloliquefaciens), and TKI18 (B. stratosphericus). After in vitro antimicrobial activity test was performed against five shellfish-pathogenic bacteria including Listonella anguillarum, Vibrio parahaemolyticus, V. splendidus, V. harveyi, V. tubiashii, PCR assay was performed to detect bacteriocin-producing strain. PCR results revealed that the five Bacillus strains possessed diverse bacteriocin genes including ericinA, coagulin, surfactin, iturin, bacyllomicin, fengycin, bacylisin, subtilin, and lantibiotics. In the present study, the selected seven Bacillus strains showed different enzyme activities according to types of macromolecule organic matters. And their antimicrobial activities varied based on the species of pathogenic bacteria. In addition, at least five Bacillus strains had genetic potential to produce several natural lipopeptide antibiotics that may help biological control of surf clam aquaculture. Therefore, mixed use of probiotics might show co-operative effect and increase the efficiency of probiotics rather than separate use. To the best of our knowledge, it is the first report on antimicrobial properties of Bacillus species isolated from surf clam.

Difference in the Susceptibility of Silkworm Varieties Reared on Artificial Diet to Nuclear Polyhedrosis Virus (인공사료육에 있어서 핵질다각체 바이러스에 대한 누에 품종별 감수성의 차이)

  • 임종성;손해룡;이영근;설광열
    • Journal of Sericultural and Entomological Science
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    • v.22 no.2
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    • pp.8-12
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    • 1981
  • Practical application of silkworm artificial diet is very desirable to save labour in sericultural industry as the problem of labour shortage is becoming serious in Korea. However, silkworms reared on the artificial diet are more susceptible to viruses than those reared on mulberry leaves because of the lower anti-viral activity of gut juice of silkworms grown on artificial diet compared with that of silkworms grown on mulberry leaves. In this study, authors investigated the varietal difference of silkworm larvae, Bombyx mori L., reared on artificial diet which contained 20 percent of dried mulberry powder, in the susceptibility to nuclear polyhedrosis virus (NPV). The results showed that there is no difference in susceptibility to NPV among tested varieties when high concentration of NPV was admitted to silkworm larvae, but varietal difference appeared in lower concentration admitted. Among 7 hybrids tested, Hansaeng 1${\times}$Hansaeng 2 was most resistant to NPV with an $LC_{50}$ of 2.7${\times}$10$\^$6/ and Jam 111${\times}$Jam 112 was also more resistant comparatively than other hybrids.

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Early Gonadogenesis and Sex Differentiation in the Bagrid Catfish, Leiocassis ussuriensis (대농갱이 (Leiocassis ussuriensis)의 초기 생식소 형성 및 성분화)

  • Park, Sang-Yong;Lee, Youn-A;Choi, Kyong-Cheol;Kang, Eon-Jong;Bang, In-Chul
    • Korean Journal of Ichthyology
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    • v.13 no.4
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    • pp.248-253
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    • 2001
  • An histological study was conducted to determine the initial treatment time and treatment duration in the use of sex-reversal hormones in relation to gonadal development and sexual differentiation in the bagrid catfish, Leiocassis ussuriensis. The primordial germ cell, which could be recognized from one-day-old fry, began to protrude into the peritoneal cavity between the mesonephric duct and the gut. The primordial gonad with a genital ridge was developed at 5~10 days after hatching. Sex differentiation of the ovary was identified by the ovarian cavity and meiotic oocytes from 20-day-old larvae. Testicular differentiation was also identified by spermatogonial cells from 20-day-old larvae. It may therefore be concluded that this species belongs to the differentiated type of gonochoristic teleost.

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Molecular and Morphological Identification of Ophichthid Leptocephali from the South Sea of Korea (남해에서 채집된 바다뱀과 엽상자어(Leptocephali)의 형태 및 분자 동정)

  • Ji, Hwan-Sung;Kim, Jin-Koo
    • Korean Journal of Ichthyology
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    • v.22 no.4
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    • pp.279-284
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    • 2010
  • Four leptocephali (TL 109.8~129.7 mm) of the family Ophichthidae, collected from Sangju in the South Sea of Korea, were identified using morphological and molecular methods. Our four leptocephali were similar to Ophichthus sp. based on morphological characters: the melanophores present in series of eight gut swellings; total myomeres 144~151; body depth in total length less than 10%; eight or nine black horizontal bands present from anus to caudal fin base. On the other hand, our four leptocephali were identified to Pisodonophis sp. based on 826 base pairs of 12S rRNA gene nucleotide sequences. Our results showed that morphology-based identification did not agree with molecular identification, indicating difficulty in differentiating morphologically between Ophichthus and Pisodonophis leptocephali. We, herein, firstly describe morphological characteristics of Pisodonophis sp. leptocephali from Korea.

Value of spray-dried egg in pig nursery diets

  • Song, Minho;Kim, Sheena;Kim, Younghwa;Park, Juncheol;Kim, Younghoon
    • Korean Journal of Agricultural Science
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    • v.42 no.3
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    • pp.207-213
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    • 2015
  • High-quality protein ingredients have been used in nursery diets, in spite of expensive ingredients, to minimize nutritional deficiency and disease problems. Recent dramatic increases in prices of protein products for nursery diets have exacerbated the challenge. Spray-dried egg may be a part of the solutions. Therefore, this review describes the value of spray-dried egg in nursery diets as a high-quality protein source. Spray-dried egg is egg by-product and is produced by only eggs without shell that are below the USDA Grade B standards. Spray-dried egg is an excellent nutrient source: 1) highly digestible, 2) excellent balance of amino acids, 3) rich content of fat, and 4) high metabolizable energy. These can be attributed to growth of nursery pigs. Beyond the provision of bioavailable nutrients, spray-dried egg also may provide specific physiological benefits. Spray-dried egg contains 1) immunoglobulin antibodies (IgY: IgG in egg yolk) that may attach to intestinal pathogens and excrete them and 2) lysozymes antimicrobial protein that can damage bacteria cell wall. Thereby feeding spray-dried egg may reduce concentration of intestinal pathogen and thus improve potential gut health or enteric disease resistance in nursery pigs. This is important for physiologically immature weaned pigs. Based on these benefits, spray-dried egg is believed to have the same benefits as spray-dried plasma protein and milk products in diets for nursery pigs. Therefore, it is suggested that spray-dried egg has a great potential as a valuable protein source in nursery diets.

Life history and growth pattern on the erigeron annuus (개망초 ( Erigeron annuus L. ) 의 生活史 및 生育特性)

  • Lee, Ho-Joon;Tae-Sung Kim
    • The Korean Journal of Ecology
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    • v.14 no.2
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    • pp.211-230
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    • 1991
  • The germinatin of e. annuus continued from the middle ofmay to mid-october. The maximum germination occurred on the mid-july. The period bloom of was distingushed amongs the different growth forms ; a orm pr of biennial and a form of pr perennial flowering from the mid-may to mid-september, and a form ps biennial blossom from the beginning of October to earlynovember. the dispersal of seed for(a form pr)occurred from early June to the mid-september. A rotte, germinating from summer to autumn, could classified into several growth forms; individuals without a critical leaf area for bolting until september and October, become a form ps of biennial, whicth did not proceed toreproductive growth unitl the next year, even thought wintering. individuals flowered on 3 years after germination become a form pr of perennial. The growth formular of aform pr of bennial, grown in a pot was w=20.2[1+$3.36{\times}10^3$(-0.062t)]$^{-1}$. The maximum relative growth rate(rgr) was 0.062g/g/day and the maximum net assimlation rate(nar) 0.089g/g/day. Therelative growth among each organ was shown as R=0.12 $T^{1.15}$between the avove-ground part(t) and the below- ground part(r). the relation between the avove-ground part(t) and the ratio of stem weight(wi) was ws/wi=2.56 $T^{0.35}$. n.p.k. was largely distributed on a leaf throughoutthe total growth period. while growing, it tended to decrease on the vegetative organ gut vice versa on the reproductive organ. however, nitrogen was more widely distributed on a leaf then in the reproductive organ.

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Marine Algal Flora and Grazing Effect of Sea Urchins in the Coastal Waters of Cheju Island (제주연안의 해조상과 성게의 섭식효과)

  • 이기완;손철현;정상철
    • Journal of Aquaculture
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    • v.11 no.3
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    • pp.401-419
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    • 1998
  • The structure of benthic algal flora and feeding behavior of sea urchins (Anthocidaris crassispina and Hemicentrotus pulcherrimus), were investigated from the eight different locations along the coast of Cheju Island, Korea. Biomass distribution and dominance of the algal communities were studied in relation to the gut contents and population parameters of the sea urchins. As a result, although the largest algal biomass and biological characteristics of sea urchins, such as test diameter, test hight, body weight, gonad weight, etc. This inhdicated that sea urchins would not be dependednt sorely on the abundance of algal foods, and they might feed on other food items. In order to know such a trend with regard to food selectivity, the diets consumed by sea urchins were analyzed, and it was found that they were composed of benthic and drifted algae, various animal components (sponges, bryozoans, crustaceans, and various unidentified capsulated eggs, etc.) and biets turned out to be smaller than might be expected, and it is postulated that sea urchins were not likely to be the major grazing animals for the formation of algal bed and also canopy deterioration, so-called "white incrustation."

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Molecular Identification, Ontogeny and Evolutionary Note of Echelus uropterus Leptocephali (날붕장어(Echelus uropterus) 엽상자어의 분자동정, 개체발생 및 진화학적 고찰)

  • Ji, Hwan-Sung;Lee, Soo-Jeong;Kim, Jin-Koo
    • Korean Journal of Ichthyology
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    • v.23 no.3
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    • pp.217-224
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    • 2011
  • The seven leptocephali (14.6~68.0 mm in total length) of the family Ophichthidae, from the East Sea of Korea, were identified using 12S rRNA 861-bp sequences and their morphological development were described. Our seven leptocephali were identified to Echelus uropterus based on genetic distance (d=0.000) being well consistent with that of adult E. uropterus. Our seven leptocephali of E. uropterus are characterized by morphological combinations: caudal fin present; the melanophores present in series of nine gut swellings; total myomeres 154~158; body depth in total length less than 10%; eight black horizontal bands present from anus to caudal fin base. Our morphological and molecular results suggest that E. uropterus may be an intermediate group between subfamily Ophichthinae and Myrophinae.

Current Status (1999) of Neonatal Surgery in Korea (1999년도 한국 신생아외과 현황 -대한소아외과학회 회원대상 전국조사(제 2 차)-)

  • Kim, W.K.;Kim, S.Y.;Kim, S.K.;Kim, I.K.;Kim, J.C.;Kim, H.H.;Park, K.W.;Park, W.H.;Song, Y.T.;Oh, S.M.;Yoo, Y.S.;Lee, D.S.;Lee, M.D.;Lee, S.C.;Lee, S.K.;Seo, J.M.;Chung, S.Y.;Jung, S.E.;Chung, U.S.;Jung, P.M.
    • Advances in pediatric surgery
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    • v.7 no.1
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    • pp.46-53
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    • 2001
  • To understand the current status of neonatal surgery in Korea, a survey was made among the 36 members of the Korean Association of Pediatric Surgeons. The response rate was 75 % (26 surgeons in 20 hospitals). Five hundred fifty three neonatal surgical patients treated in 1999 were analyzed. Regional numbers of patients were closely related to the regional population in most areas. Ano-rectal malformations (17 %), pyloric stenosis (16 %), Hirschsprung's disease (13 %), atresia/stenosis of the gut (11 %), esophageal atresia (8 %) were the most common anomalies treated. The majority of operations were done within the first week of life. Seventy one per cent of cases were major life threatening or so-called neonatal index cases. Over-all mortality was 8 per cent. Higher mortality was observed in patients with diaphragmatic hernia (26 %), gastro-intestinal perforation (18 %), NEC (18 %), and esophageal atresia(14 %). Higher mortality was observed in patients with extremely low birth weight (33%) and low birth weight (18 %). Associated anomalies were observed in 20 %. Prenatal ultrasound was performed in 36 per cent with sensitivity of 20 %. Result of this study was compared to the previous report (1994) and that of Japan (1998).

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