• Title/Summary/Keyword: genetic variability

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Genetic Variation of the Pleurotus ostreatus Complex Based on Isozyme Analysis (동위효소 분석에 의한 Pleurotus ostreatus Complex의 유전적 변이)

  • Lee, Hee-Kyung;Yoo, Young-Bok;Min, Kyung-Hee
    • The Korean Journal of Mycology
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    • v.27 no.5 s.92
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    • pp.328-336
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    • 1999
  • Isozyme comparisons of mycelial extracts from Pleurotus ostreatus were undertaken using isoelectric focusing. Enzyme isozyme patterns were Used to describe the extent of geographical diversity and degree of intraspecific variation in these extracts. A total of 77 bands were resolved from six different enzymes. Cluster analyses were performed using the zymograms for esterase (EST), glucose phosphate isomerase (GPI), leucine aminopeptidase (LAP), malate dehydrogenase(MDH), peroxidase (POX), and phosphoglucomutase (pGM). EST gave multiple banding patterns, while less variability was observed for GPI, MDH, and PGM. Cluster analyses demonstrated that strains of P. ostreatus from geographically different origins are genetically divergent, supporting the idea that there is little or no gene flow between these geographically distant population groups.

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Studies on Analysis of Combining Ability in the Mulberry Silkworm, Bombyx mori L.

  • Singh, Ravindra;Rao, D.Raghavendra;Kariappa, B.K.;Premalatha, V.;Dandin, S.B.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.6 no.2
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    • pp.107-113
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    • 2003
  • Analysis of combining ability is a widely used biometrical tool to select promising parents and hybrids, to determine the kinds and relative magnitudes of genetic variability among hybrids as well as to forecast yield attributes in early breeding generations both in plants and animals. Various statistical approaches like Jinks and Hayman (1953), Griffing (1956), Kempthorne (1957) etc. have been extensively applied in plants. These approaches have also been tried in the mulberry silkworm, Bombyx mori L. In the present review, an attempt has been made to collect most of the studies carried out on combining ability in silkworm at one place and make it available to the scientists engaged in sericultural research.

A GENETIC SRTUDY ON THE DIMENSION OF DENTAL ARCHES IN TWINS (쌍생아의 치열궁크기에 관한 유전학적 연구)

  • Kim, Nam-Il;Yang, Jung-Kang;Kim, Man-Su
    • The Journal of the Korean dental association
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    • v.9 no.1
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    • pp.43-48
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    • 1971
  • The purpose of this study is to evaluate the influence of genetics of the dimensions of dental arches in twins. Thirty-four pairs of Korean twins, of which twenty-three were monozygotic and eleven dizygotic, participated in the study. The twins ranged in age from 6 years to 12 years with mixed dentition. The results were as follows: 1) No significant differences were observed between male and female in mean interpair diffenences of monozygotic twins. 2) Mean interpair differences of monozygotic twins were lesser than these of dizygotic twins. 3) Highly significiant zygotic differences were observed in the mean interpair differences of the width of upper and lower dental arch. This suggest that there is a significant component of hereditary variability.

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Isolation and Characterization of Cryptococcus neoformans from Environmental Sources in Busan

  • Oh, Kwang-Seok;Hwang, Soo-Myung
    • Mycobiology
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    • v.33 no.4
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    • pp.188-193
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    • 2005
  • Twenty nine samples of pigeon droppings (n = 12) and soil contaminated with avian excreta (n = 19), collected from different sites in Busan, were examined for isolation and characterization of Cryptococcus neoformans. Of these samples, 5 strains of C. neoformans were recovered from pigeon droppings (5/12 : 41.7%). All isolates were belonged to C. neoformans var. grubii (serotype A). The extracellular enzyme activities of the strains by using the API-ZYM system showed two different enzymatic patterns. The genetic variability among C. neoformans isolates was analyzed by random amplified polymorphic DNA (RAPD) using three 10-mer primers. Two different RAPD patterns, which clearly distinguished the isolates, were identified. Analysis of RAPD patterns provided a good characterization of environmental strains of C. neoformans serotype A as a heterogeneous group and were in good agreement with enzymatic profiles.

SSR-Primer Generator: A Tool for Finding Simple Sequence Repeats and Designing SSR-Primers

  • Hong, Chang-Pyo;Choi, Su-Ryun;Lim, Yong-Pyo
    • Genomics & Informatics
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    • v.9 no.4
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    • pp.189-193
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    • 2011
  • Simple sequence repeats (SSRs) are ubiquitous short tandem duplications found within eukaryotic genomes. Their length variability and abundance throughout the genome has led them to be widely used as molecular markers for crop-breeding programs, facilitating the use of marker-assisted selection as well as estimation of genetic population structure. Here, we report a software application, "SSR-Primer Generator " for SSR discovery, SSR-primer design, and homology-based search of in silico amplicons from a DNA sequence dataset. On submission of multiple FASTA-format DNA sequences, those analyses are batch processed in a Java runtime environment (JRE) platform, in a pipeline, and the resulting data are visualized in HTML tabular format. This application will be a useful tool for reducing the time and costs associated with the development and application of SSR markers.

Optimal design of reinforced concrete beams: A review

  • Rahmanian, Ima;Lucet, Yves;Tesfamariam, Solomon
    • Computers and Concrete
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    • v.13 no.4
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    • pp.457-482
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    • 2014
  • This paper summarizes available literature on the optimization of reinforced concrete (RC) beams. The objective of optimization (e.g. minimum cost or weight), the design variables and the constraints considered by different studies vary widely and therefore, different optimization methods have been employed to provide the optimal design of RC beams, whether as isolated structural components or as part of a structural frame. The review of literature suggests that nonlinear deterministic approaches can be efficiently employed to provide optimal design of RC beams, given the small number of variables. This paper also presents spreadsheet implementation of cost optimization of RC beams in the familiar MS Excel environment to illustrate the efficiency of the exhaustive enumeration method for such small discrete search spaces and to promote its use by engineers and researchers. Furthermore, a sensitivity analysis is performed on the contribution of various design parameters to the variability of the overall cost of RC beams.

Pharmacogenomics in Relation to Tailor-made Drugs

  • Satoh, Tetsuo
    • Biomolecules & Therapeutics
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    • v.14 no.4
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    • pp.183-188
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    • 2006
  • The field of cytochrome P450 pharmacogenomics has progressed rapidly during the past 25 years. Recently, conjugating enzymes including sulfotransferase, acetyltransferase, glucuronosyltransferase and glutathione transferase have been also extensively studied. All the major human drug-metabolizing P450 enzymes and some conjugating enzymes have been identified and cloned, and the major gene variants that cause inter-individual variability in drug response and are related to adverse drug reactions have been identified. This information now provides the basis for the use of predictive pharmacogenomics to yield drug therapies that are more efficient and safer. Today, we understand which drugs warrant dosing based on pharmacogenomics to improve drug treatment. It is anticipated that genotyping could be used to personalize drug treatment for vast numbers of subjects, decreasing the cost of drug treatment and increasing the efficacy of drugs and health in general. It is assumed that such personalized P450 gene-based treatment which is so-called tailor(order)-made drug therapy would be relevant for 10-20% of all drug therapy in the future.

Current Pharmacogenetics in Psychiatry (정신의학에서의 약물유전학 현황)

  • Kim, Il Bin;Lee, Yu Sang
    • Korean Journal of Biological Psychiatry
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    • v.28 no.1
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    • pp.1-6
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    • 2021
  • Pharmacogenetics is opening a new era of precision medicine in psychiatry. Drug-metabolizing enzymes are characterized by genetic polymorphisms, which render a large portion of variability in individual drug metabolism. Dose adjustment based on pharmacogenetics knowledge is a first step to translate pharmacogenetics into clinical practice. However, diverse factors including cost-effectiveness should be addressed to provide clinical recommendation. To address current challenges in pharmacogenetics testing in psychiatry, this review provides an update regarding genotyping (SNP analysis, array, and next-generation sequencing), genotype-phenotype correlations, and cost-effectiveness. The current updates on pharmacogenetics in psychiatry will provide guidance for both clinician and researchers to have a consensus in harmonizing efforts to advance the pharmacogenetics field in a part of precision medicine in psychiatry.