• Title/Summary/Keyword: fundamental informatics

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Membrane Proteins Involved in Epithelial-Mesenchymal Transition and Tumor Invasion: Studies on TMPRSS4 and TM4SF5

  • Kim, Semi;Lee, Jung Weon
    • Genomics & Informatics
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    • v.12 no.1
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    • pp.12-20
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    • 2014
  • The epithelial-mesenchymal transition (EMT) is one mechanism by which cells with mesenchymal features can be generated and is a fundamental event in morphogenesis. Recently, invasion and metastasis of cancer cells from the primary tumor are now thought to be initiated by the developmental process termed the EMT, whereby epithelial cells lose cell polarity and cell-cell interactions, and gain mesenchymal phenotypes with increased migratory and invasive properties. The EMT is believed to be an important step in metastasis and is implicated in cancer progression, although the influence of the EMT in clinical specimens has been debated. This review presents the recent results of two cell surface proteins, the functions and underlying mechanisms of which have recently begun to be demonstrated, as novel regulators of the molecular networks that induce the EMT and cancer progression.

Control of asymmetric cell division in early C. elegans embryogenesis: teaming-up translational repression and protein degradation

  • Hwang, Sue-Yun;Rose, Lesilee S.
    • BMB Reports
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    • v.43 no.2
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    • pp.69-78
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    • 2010
  • Asymmetric cell division is a fundamental mechanism for the generation of body axes and cell diversity during early embryogenesis in many organisms. During intrinsically asymmetric divisions, an axis of polarity is established within the cell and the division plane is oriented to ensure the differential segregation of developmental determinants to the daughter cells. Studies in the nematode Caenorhabditis elegans have contributed greatly to our understanding of the regulatory mechanisms underlying cell polarity and asymmetric division. However, much remains to be elucidated about the molecular machinery controlling the spatiotemporal distribution of key components. In this review we discuss recent findings that reveal intricate interactions between translational control and targeted proteolysis. These two mechanisms of regulation serve to carefully modulate protein levels and reinforce asymmetries, or to eliminate proteins from certain cells.

CONSTRUCTION OF QUOTIENT BCI(BCK)-ALGEBRA VIA A FUZZY IDEAL

  • Liu, Yong-Lin;Jie Meng
    • Journal of applied mathematics & informatics
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    • v.10 no.1_2
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    • pp.51-62
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    • 2002
  • The present paper gives a new construction of a quotient BCI(BCK)-algebra X/${\mu}$ by a fuzzy ideal ${\mu}$ in X and establishes the Fuzzy Homomorphism Fundamental Theorem. We show that if ${\mu}$ is a fuzzy ideal (closed fuzzy ideal) of X, then X/${\mu}$ is a commutative (resp. positive implicative, implicative) BCK(BCI)-algebra if and only if It is a fuzzy commutative (resp. positive implicative, implicative) ideal of X Moreover we prove that a fuzzy ideal of a BCI-algebra is closed if and only if it is a fuzzy subalgebra of X We show that if the period of every element in a BCI-algebra X is finite, then any fuzzy ideal of X is closed. Especiatly, in a well (resp. finite, associative, quasi-associative, simple) BCI-algebra, any fuzzy ideal must be closed.

MINIMUM DEGREE AND INDEPENDENCE NUMBER FOR THE EXISTENCE OF HAMILTONIAN [a, b]-FACTORS

  • Zhou, Sizhong;Pu, Bingyuan
    • Journal of applied mathematics & informatics
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    • v.28 no.1_2
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    • pp.325-331
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    • 2010
  • Let a and b be nonnegative integers with 2 $\leq$ a < b, and let G be a Hamiltonian graph of order n with n > $\frac{(a+b-5)(a+b-3)}{b-2}$. An [a, b]-factor F of G is called a Hamiltonian [a, b]-factor if F contains a Hamiltonian cycle. In this paper, it is proved that G has a Hamiltonian [a, b]-factor if $\delta(G)\;\geq\;\frac{(a-1)n+a+b-3)}{a+b-3}$ and $\delta(G)$ > $\frac{(a-2)n+2{\alpha}(G)-1)}{a+b-4}$.

BIFUZZY IDEALS OF PSEUDO MV-ALGEBRAS

  • Cho Yong-Uk;Jun Young-Bae;Song Seok-Zun
    • Journal of applied mathematics & informatics
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    • v.22 no.1_2
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    • pp.475-489
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    • 2006
  • After the introduction of fuzzy sets by Zadeh [8], there have been a number of generalizations of fundamental concept. The notion of intuitionistic fuzzy sets introduced by Atanassov is one among them. An intuitionistic fuzzy set is also called a bifuzzy set according to [5]. In this paper, we apply the concept of a bifuzzy set to (implicative) ideals in pseudo MV-algebras. The notion of a bifuzzy (implicative) ideal of a pseudo MV-algebra is introduced, and some related properties are investigated. Conditions for a bifuzzy set to be a bifuzzy ideal are given, and characterizations of a bifuzzy (implicative) ideal are provided. Using a family of ideals, bifuzzy ideals are established.

THE SPACE-TIME FRACTIONAL DIFFUSION EQUATION WITH CAPUTO DERIVATIVES

  • HUANG F.;LIU F.
    • Journal of applied mathematics & informatics
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    • v.19 no.1_2
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    • pp.179-190
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    • 2005
  • We deal with the Cauchy problem for the space-time fractional diffusion equation, which is obtained from standard diffusion equation by replacing the second-order space derivative with a Caputo (or Riemann-Liouville) derivative of order ${\beta}{\in}$ (0, 2] and the first-order time derivative with Caputo derivative of order ${\beta}{\in}$ (0, 1]. The fundamental solution (Green function) for the Cauchy problem is investigated with respect to its scaling and similarity properties, starting from its Fourier-Laplace representation. We derive explicit expression of the Green function. The Green function also can be interpreted as a spatial probability density function evolving in time. We further explain the similarity property by discussing the scale-invariance of the space-time fractional diffusion equation.

ELEMENTS OF THE KKM THEORY FOR GENERALIZED CONVEX SPACE

  • Park, Se-Hei
    • Journal of applied mathematics & informatics
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    • v.7 no.1
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    • pp.1-28
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    • 2000
  • In the present paper, we introduce fundamental results in the KKM theory for G-convex spaces which are equivalent to the Brouwer theorem, the Sperner lemma, and the KKM theorem. Those results are all abstract versions of known corresponding ones for convex subsets of topological vector spaces. Some earlier applications of those results are indicated. Finally, We give a new proof of the Himmelberg fixed point theorem and G-convex space versions of the von Neumann type minimax theorem and the Nash equilibrium theorem as typical examples of applications of our theory.

THE FUNDAMENTAL SOLUTION OF THE SPACE-TIME FRACTIONAL ADVECTION-DISPERSION EQUATION

  • HUANG F.;LIU F.
    • Journal of applied mathematics & informatics
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    • v.18 no.1_2
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    • pp.339-350
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    • 2005
  • A space-time fractional advection-dispersion equation (ADE) is a generalization of the classical ADE in which the first-order time derivative is replaced with Caputo derivative of order $\alpha{\in}(0,1]$, and the second-order space derivative is replaced with a Riesz-Feller derivative of order $\beta{\in}0,2]$. We derive the solution of its Cauchy problem in terms of the Green functions and the representations of the Green function by applying its Fourier-Laplace transforms. The Green function also can be interpreted as a spatial probability density function (pdf) evolving in time. We do the same on another kind of space-time fractional advection-dispersion equation whose space and time derivatives both replacing with Caputo derivatives.

The Atom of Evolution

  • Bhak, Jonghwa;Bolser, Dan;Park, Daeui;Cho, Yoobok;Yoo, Kiesuk;Lee, Semin;Gong, SungSam;Jang, Insoo;Park, Changbum;Huston, Maryana;Choi, Hwanho
    • Genomics & Informatics
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    • v.2 no.4
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    • pp.167-173
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    • 2004
  • The main mechanism of evolution is that biological entities change, are selected, and reproduce. We propose a different concept in terms of the main agent or atom of evolution: in the biological world, not an individual object, but its interactive network is the fundamental unit of evolution. The interaction network is composed of interaction pairs of information objects that have order information. This indicates a paradigm shift from 3D biological objects to an abstract network of information entities as the primary agent of evolution. It forces us to change our views about how organisms evolve and therefore the methods we use to analyze evolution.

ANALYSIS OF K-CLASS-BASED DEDICATED STORAGE POLICY IN A UNIT LOAD SYSTEM

  • Yang, Moon-Hee;Rhee, Min-Surp
    • Journal of applied mathematics & informatics
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    • v.23 no.1_2
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    • pp.505-516
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    • 2007
  • In this paper, we provide some fundamental properties and basic theoretical results of K-class-based dedicated storage policy in a unit load system assuming the constant-space assumption that the number of storage locations for a class is not the maximum aggregate inventory position for a class but the sum of space requirement for products assigned to the class. The main theorem is that there exists a (K+1) -class-based storage layout whose expexted single command (SC) travel time is not greater than that of a K-class-based storage layout, i.e, $E(SC^*_{K+1}){\leq}E(SC^*_K)\;for\;K=1,{\cdots}$, (n-1).