• 제목/요약/키워드: functional differential system

검색결과 135건 처리시간 0.028초

Korean Medicated Diet Has Lee Jema's Traditional Sasang Medicines by High Absorbency and Natural Healing-Power Targets

  • Kim, Dong-Myong;Cha, Eun-Chung
    • Preventive Nutrition and Food Science
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    • 제10권2호
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    • pp.198-205
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    • 2005
  • Korean medicated diet (KMD) is not a simple combination of food and Chinese drugs, but a special carefully constructed diet made from Sasang constitutional medicines, food and condiments under the theoretical guidance of diet preparation based on differentiation of symptoms and signs of traditional Sasang medicine (TSM). It combines the functional efficacy of medicine with the delicacy of food, and can be used to prevent and cure diseases, build up one's health and prolong one's life. Korean traditional medicated diet has a long history of development. Although influenced by Chinese medicine, Korean traditional medicine has been developed into a unique system of traditional medicine that has surpassed the continental medical practice, sublimating itself into a native medical practice suitable to Korean lifestyles and physical constitutions. In the 19th century, Lee Jema's Sasang medicine (medicine of four types of energy determining the physical constitution) was introduced. It is an integration of mind and body according to the individual's physical constitution that is categorized allowing a customized method of treatment ideal for each category-making the content of Korean traditional medicated diet even richer. The characteristics of Korean medicated diet are as follows: (1) Laying stress on the wole, selecting medicated diet on the basis of differential diagnosis. (2) Suitable for prevention and treatment, outstanding in effect. (3) Good in taste, convenient for taking. KMD refers to drink and food according to certain prescriptions, by processing and cooking that can be used either for prevention and cure of diseases, or for health care and recovery. The purpose of this review is to introduce TSM and KMD based on Sasang constitutional medicines.

RNA-Seq De Novo Assembly and Differential Transcriptome Analysis of Korean Medicinal Herb Cirsium japonicum var. spinossimum

  • Roy, Neha Samir;Kim, Jung-A;Choi, Ah-Young;Ban, Yong-Wook;Park, Nam-Il;Park, Kyong-Cheul;Yang, Hee-sun;Choi, Ik-Young;Kim, Soonok
    • Genomics & Informatics
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    • 제16권4호
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    • pp.34.1-34.9
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    • 2018
  • Cirsium japonicum belongs to the Asteraceae or Compositae family and is a medicinal plant in Asia that has a variety of effects, including tumour inhibition, improved immunity with flavones, and antidiabetic and hepatoprotective effects. Silymarin is synthesized by 4-coumaroyl-CoA via both the flavonoid and phenylpropanoid pathways to produce the immediate precursors taxifolin and coniferyl alcohol. Then, the oxidative radicalization of taxifolin and coniferyl alcohol produces silymarin. We identified the expression of genes related to the synthesis of silymarin in C. japonicum in three different tissues, namely, flowers, leaves, and roots, through RNA sequencing. We obtained 51,133 unigenes from transcriptome sequencing by de novo assembly using Trinity v2.1.1, TransDecoder v2.0.1, and CD-HIT v4.6 software. The differentially expressed gene analysis revealed that the expression of genes related to the flavonoid pathway was higher in the flowers, whereas the phenylpropanoid pathway was more highly expressed in the roots. In this study, we established a global transcriptome dataset for C. japonicum. The data shall not only be useful to focus more deeply on the genes related to product medicinal metabolite including flavolignan but also to study the functional genomics for genetic engineering of C. japonicum.

Bioinformatic analyses reveal the prognostic significance and potential role of ankyrin 3 (ANK3) in kidney renal clear cell carcinoma

  • Keerakarn Somsuan;Siripat Aluksanasuwan
    • Genomics & Informatics
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    • 제21권2호
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    • pp.22.1-22.15
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    • 2023
  • Kidney renal clear cell carcinoma (KIRC) is one of the most aggressive cancer type of the urinary system. Metastatic KIRC patients have poor prognosis and limited therapeutic options. Ankyrin 3 (ANK3) is a scaffold protein that plays important roles in maintaining physiological function of the kidney and its alteration is implicated in many cancers. In this study, we investigated differential expression of ANK3 in KIRC using GEPIA2, UALCAN, and HPA databases. Survival analysis was performed by GEPIA2, Kaplan-Meier plotter, and OS-kirc databases. Genetic alterations of ANK3 in KIRC were assessed using cBioPortal database. Interaction network and functional enrichment analyses of ANK3-correlated genes in KIRC were performed using GeneMANIA and Shiny GO, respectively. Finally, the TIMER2.0 database was used to assess correlation between ANK3 expression and immune infiltration in KIRC. We found that ANK3 expression was significantly decreased in KIRC compared to normal tissues. The KIRC patients with low ANK3 expression had poorer survival outcomes than those with high ANK3 expression. ANK3 mutations were found in 2.4% of KIRC patients and were frequently co-mutated with several genes with a prognostic significance. ANK3-correlated genes were significantly enriched in various biological processes, mainly involved in peroxisome proliferator-activated receptor (PPAR) signaling pathway, in which positive correlations of ANK3 with PPARA and PPARG expressions were confirmed. Expression of ANK3 in KIRC was significantly correlated with infiltration level of B cell, CD8+ T cell, macrophage, and neutrophil. These findings suggested that ANK3 could serve as a prognostic biomarker and promising therapeutic target for KIRC.

Physiological and transcriptome analysis of acclimatory response to cold stress in marine red alga Pyropia yezoensis

  • Li-Hong Ma;Lin Tian;Yu-Qing Wang;Cong-Ying Xie;Guo-Ying Du
    • ALGAE
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    • 제39권1호
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    • pp.17-30
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    • 2024
  • Red macroalga Pyropia yezoensis is a high valuable cultivated marine crop. Its acclimation to cold stress is especially important for long cultivation period across winter in coasts of warm temperate zone in East Asia. In this study, the response of P. yezoensis thalli to low temperature was analyzed on physiology and transcriptome level, to explore its acclimation mechanism to cold stress. The results showed that the practical photosynthesis activity (indicated by ΦPSII and qP) was depressed and pigment allophycocyanin content was decreased during the cold stress of 48 h. However, the Fv/Fm and non-photochemical quenching increased significantly after 24 h, and the average growth rate of thalli also rebounded from 24 to 48 h, indicating a certain extent of acclimation to cold stress. On transcriptionally, the low temperature promoted the expression of differentially expressed genes (DEGs) related to carbohydrate metabolism and energy metabolism, while genes related to photosynthetic system were depressed. The increased expression of DEGs involved in ribosomal biogenesis and lipid metabolism which could accelerate protein synthesis and enhance the degree of fatty acid unsaturation, might help P. yezoensis thallus cells to cope with cold stress. Further co-expression network analysis revealed differential expression trends along with stress time, and corresponding hub genes play important roles in the systemic acquired acclimation to cold stress. This study provides basic mechanisms of P. yezoensis acclimation to cold temperature and may aid in exploration of functional genes for genetic breeding of economic macroalgae.

Sol-Gel Synthesis, Crystal Structure, Magnetic and Optical Properties in ZnCo2O3 Oxide

  • Das, Bidhu Bhusan;Barman, Bittesh
    • 대한화학회지
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    • 제63권6호
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    • pp.453-458
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    • 2019
  • Synthesis of ZnCo2O3 oxide is performed by sol-gel method via nitrate-citrate route. Powder X-ray diffraction (XRD) study shows monoclinic unit cell having lattice parameters: a = 5.721(1) Å, b = 8.073(2) Å, c = 5.670(1) Å, β = 93.221(8)°, space group P2/m and Z = 4. Average crystallite sizes determined by Scherrer equation are the range ~14-32 nm, whereas SEM micrographs show nano-micro meter size particles formed in ZnCo2O3. Endothermic peak at ~798 K in the Differential scanning calorimetric (DSC) trace without weight loss could be due to structural transformation and the endothermic peak ~1143 K with weight loss is due to reversible loss of O2 in air atmosphere. Energy Dispersive X-ray (EDX) analysis profile shows the presence of elements Zn, Co and O which indicates the purity of the sample. Magnetic measurements in the range of +12 kOe to -12 kOe at 10 K, 77 K, 120 K and at 300 K by PPMS-II Physical Property Measurement System (PPMS) shows hysteresis loops having very low values of the coercivity and retentivity which indicates the weakly ferromagnetic nature of the oxide. Observed X-band EPR isotropic lineshapes at 300 K and 77 K show positive g-shift at giso ~2.230 and giso ~2.217, respectively which is in agreement with the presence of paramagnetic site Co2+(3d7) in the oxide. DC conductivity value of 2.875 ×10-8 S/cm indicates very weakly semiconducting nature of ZnCo2O3 at 300 K. DRS absorption bands ~357 nm, ~572 nm, ~619 nm and ~654 nm are due to the d-d transitions 4T1g(4F)→2Eg(2G), 4T1g(4F)→4T1g(4P), 4T1g(4F)→4A2g(4F), 4T1g(4F)→4T2g(4F), respectively in octahedral ligand field around Co2+ ions. Direct band gap energy, Eg~ 1.5 eV in the oxide is obtained by extrapolating the linear part of the Tauc plot to the energy axis indicates fairly strong semiconducting nature of ZnCo2O3.

(H2O-Piperidine-CO2) system에서 piperidine 유도체의 작용기 위치에 따른 이산화탄소 흡수특성 연구 (The Effect of Functional Group Position of the Piperidine Derivatives on the CO2 Absorption Characteristics in the (H2O-Piperidine-CO2) System)

  • 최정호;윤성희;김영은;윤여일;남성찬
    • Korean Chemical Engineering Research
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    • 제53권1호
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    • pp.57-63
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    • 2015
  • 본 연구에서는 기-액 평형장치와 반응열 측정장치를 이용하여 2-methylpiperidine (2MPD), 3-methylpiperidine (3MPD), 4-methylpiperidine (4MPD) 흡수제의 이산화탄소 흡수특성을 연구하였다. 기-액 평형장치를 이용하여 각 흡수제의 이산화탄소 흡수능을 알아보았고, 흡수평형 후의 흡수액을 핵자기공명장치(nuclear magnetic resonance spectroscopy: NMR)로 분석하여 종 형성을 확인하였다. 추가적으로 반응열 측정장치를 이용하여 흡수능에 따른 반응열을 제시하였다. 실험결과 2MPD, 3MPD, 4MPD 흡수제는 작용기 위치에 따라 다른 특성을 나타내었다. Ortho 위치에 메틸기를 가진 2MPD는 입체장애효과로 인하여 흡수반응에서 특이성이 나타났으나 3MPD와 4MPD는 ($H_2O$-piperidine-$CO_2$) 시스템에서 반응 특이성이 나타나지 않았다.

(2D)2PCA 알고리즘을 이용한 pRBFNNs 패턴분류기 기반 얼굴인식 시스템 설계 (Design of pRBFNNs Pattern Classifier-based Face Recognition System Using 2-Directional 2-Dimensional PCA Algorithm)

  • 오성권;진용탁
    • 전자공학회논문지
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    • 제51권1호
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    • pp.195-201
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    • 2014
  • 본 연구에서는 $(2D)^2PCA$ 알고리즘을 이용한 pRBFNNs 패턴분류기 기반 얼굴인식 시스템을 설계하였다. 기존의 1차원 PCA는 행과 열의 곱으로 표현한 이미지의 차원을 축소한다. 하지만 $(2D)^2PCA$(2-Directional 2-Dimensional Principal Components Analysis)는 이미지의 행과 열에서 각각 차원축소를 수행한다. 그 다음 제안된 지능형 패턴분류기로 축소된 이미지를 사용하여 성능을 평가한다. (pRBFNNs)로 성능 평가를 한다. 제안된 다항식 기반 RBFNNs은 조건부, 결론부, 추론부 세가지의 기능적 모듈로 구성되어 있고 조건는 퍼지 클러스터링을 사용하여 입력 공간을 분할하고, 결론부는 RBFNNs의 연결가중치로 일차 선형식으로 표현한다. 또한 차분진화 알고리즘을 이용하여 제안된 분류기의 파라미터, 즉 입력의 수, 퍼지 클러스터링의 퍼지화 계수를 최적화 한다. 얼굴인식에 많이 사용되는 Yale과 AT&T를 사용하여 인식률을 평가하였다. 실험 평가를 위해 IC&CI 연구실 데이터를 추가하여 실험하였다.

Escherichia coli 리보핵산 내부분해효소 RNase E의 돌연변이체 선별 및 특성분석 (Identification and Functional Analysis of Escherichia coli RNase E Mutants)

  • 신은경;고하영;김영민;주세진;이강석
    • 미생물학회지
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    • 제43권4호
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    • pp.325-330
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    • 2007
  • 대장균의 필수적인 리보핵산 내부분해효소인 RNase E는세포내에서 여러 RNA의 분해와 가공과정에서 중요한 역할을 하며, 이 단백질의 효소활성부위를 포함하는 N-말단부위의 498 아미노산(N-Rne)만의 발현으로도 세포의 생장을 가능하게 한다. 이러한 RNase E의 특성을 활용하여 다양한 표현형을 가지는 N-Rne 돌연변이체들을 분리, 동정할 수 있는 효율적인 유전학적 시스템을 개발하였다. 이 시스템을 이용하여 얻어진 효소활성부위 돌연변이체들을 표현형으로 분류하여 분석한 결과, S1 도메인의 6번째 아미노산의 치환(I6T)을 가진 변이체는 야생형 N-Rne의 기능을 대체하지 못하였고, Small 도메인의 488번째 아미노산의 치환(R488C)을 가진 변이체는 야생형 N-Rne의 발현양보다 현저히 작게 발현시켜도 세포의 생장을 정상적으로 가능하게 하였다. 또한 DNase I 도메 인의 305번째 아미노산의 치환(N305D)을 가진 변이체는 야생형 N-Rne의 발현양보다 과발현시켰을 때만 세포의 생장을 가능하게 하였다. 각각의 아미노산 치환을 포함하는 N-Rne를 한정적으로 과발현시켰을 때의 ColEl-타입 플라스미드의 복제 수에 대한 영향을 측정한 결과, 돌연변이체 N-Rne의 세포생장에 대한 영향은 이 변이체들의 세포 내 효소활성 정도에 기인하는 것으로 밝혀졌다. 이러한 실험결과는 이 연구에서 개발한 유전학적 시스템을 이용하여 다양한 표현형을 가진 RNase E 변이체를 선별할 수 있으며, 이 변이체들의 특성을 분석함으로써 RNase E가 RNA의 안정성을 조절하는데 있어서 각각의 세부 도메인의 역할을 규명할 수 있으리라는 것을 시사한다.

신성 고혈압쥐의 전신성 동맥계와 폐동맥계에 대한 EDRF 기능의 차이 (Differential Function of EDRF in Systemic Arterial and Pulmonary Arterial System of Renal Hypertensive Rats)

  • 이병호;신화섭;허인회
    • 대한약리학회지
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    • 제29권2호
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    • pp.213-223
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    • 1993
  • 급성 신성 고혈압쥐 (2-kidney, 1-ligation type)의 전신성 동맥계와 폐 동맥계에 대한 내피 의존적 혈관반응성을 규명하기 위하여, 적출 혈관 및 마취상태의 흰쥐에 대한 acetylcholine (ACh)의 혈관이완작용 및 혈압강하 작용을 측정하였다. 혈장 renin 활성(PRA)은 신동맥 결찰전 $7.31{\pm}0.63\;ng/ml/hr$ A I에 비해 결찰 $6{\sim}8$일후에는 $19{\sim}22\;ng/ml/hr$ A I으로 유의성있게 증가하였으며, 이는 수축기혈압의 상승과 $(154{\pm}1.83{\rightarrow}190{\sim}215\;mmHg)$ 일정한 상관성을 유지하였다. 신성 고혈압쥐 및 정상 혈압쥐의 흉곽 대동맥은 내피세포 존재시 ACh에 의해 용량의존적으로 이완되었으며, 이때 신성고혈압쥐에서의 반응은 정상 혈압쥐에 비해 유의성있게 감소하였다(각각 34% 및 86%, p<0.01). 또한 ACh은 신성 고혈압쥐 및 정상 혈압쥐의 폐동맥에 대해서도 내피세포 존재시에 이완반응을 초래하였다. 그러나, 흉곽 대동맥에서와는 달리 두 군간에 유의성있는 차이가 없었다. 이들 반응은 내피세포 제거후 또는 EDRF 억제제 (L-NAME, MB, $10^{-5}$ M) 투여후 유의성있게 억제되었다. $ACh(0.1{\sim}10\;{\mu}g/kg,\;i.v.)$은 신성 고혈압쥐 및 정상 혈압쥐에서 전신성 동맥압의 강하를 초래하였는데, 신성 고혈압쥐에서 다소 감소하였으나 유의성있는 차이는 없었으며 ($SAPm;\;10\;{\mu}g/kg$에서 각각 39%, 46 %), 이들 작용은 L-NAME(30 mg/kg, i.v.) 전처치후 유의성있게 억제되었다. ACh에 의한 폐동맥압 강하는 신성 고혈압쥐 및 정상 혈압쥐 사이에 서로 비슷하게 나타났다. 그러나, 신성 고혈압 쥐 및 정상 혈압쥐에서 ACh에 의한 폐동맥압의 강하율은 전신성 동맥압의 강하율보다 유의성있게(p<0.01) 작았으며, 또한 L-NAME $(0.1{\sim}100\;mg/kg,\;i.v.)$에 의한 폐동맥압의 상승은 전신성 동맥압의 상승보다 유의성있게(p<0.01) 작았다. 이상의 실험 결과들은 급성 신성 고혈압쥐의 전신성 동맥계에서는 내피세포 손상이 초래되지만, 폐동맥계에서는 초래되지 않는다는것을 제시해준다. 또 신성고혈압쥐 및 정상 혈압쥐에서 EDRF 의 basal release 및 ACh 유발성 EDRF function은 전신성 동맥계에 비해 폐동맥계에서 적다는 것을 제시해준다.

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In Vivo Angiogenic Capacity of Stem Cells from Human Exfoliated Deciduous Teeth with Human Umbilical Vein Endothelial Cells

  • Kim, Ji-Hye;Kim, Gee-Hye;Kim, Jae-Won;Pyeon, Hee Jang;Lee, Jae Cheoun;Lee, Gene;Nam, Hyun
    • Molecules and Cells
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    • 제39권11호
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    • pp.790-796
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    • 2016
  • Dental pulp is a highly vascularized tissue requiring adequate blood supply for successful regeneration. In this study, we investigated the functional role of stem cells from human exfoliated deciduous teeth (SHEDs) as a perivascular source for in vivo formation of vessel-like structures. Primarily isolated SHEDs showed mesenchymal stem cell (MSC)-like characteristics including the expression of surface antigens and in vitro osteogenic and adipogenic differentiation potentials. Moreover, SHEDs were positive for NG2, ${\alpha}$-smooth muscle actin (SMA), platelet-derived growth factor receptor beta ($PDGFR{\beta}$), and CD146 as pericyte markers. To prove feasibility of SHEDs as perivascular source, SHEDs were transplanted into immunodeficient mouse using Matrigel with or without human umbilical vein endothelial cells (HUVECs). Transplantation of SHEDs alone or HUVECs alone resulted in no formation of vessel-like structures with enough red blood cells. However, when SHEDs and HUVECs were transplanted together, extensive vessel-like structures were formed. The presence of murine erythrocytes within lumens suggested the formation of anastomoses between newly formed vessel-like structures in Matrigel plug and the host circulatory system. To understand underlying mechanisms of in vivo angiogenesis, the expression of angiogenic cytokine and chemokine, their receptors, and MMPs was compared between SHEDs and HUVECs. SHEDs showed higher expression of1VEGF, SDF-$1{\alpha}$, and $PDGFR{\beta}$ than HUVECs. On the contrary, HUVECs showed higher expression of VEGF receptors, CXCR4, and PDGF-BB than SHEDs. This differential expression pattern suggested reciprocal interactions between SHEDs and HUVECs and their involvement during in vivo angiogenesis. In conclusion, SHEDs could be a feasible source of perivascular cells for in vivo angiogenesis.