• Title/Summary/Keyword: experimental population

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Ovarian Cancer: Interplay of Vitamin D Signaling and miRNA Action

  • Attar, Rukset;Gasparri, Maria Luisa;Di Donato, Violante;Yaylim, Ilhan;Halim, Talha Abdul;Zaman, Farrukh;Farooqi, Ammad Ahmad
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.8
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    • pp.3359-3362
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    • 2014
  • Increasing attention is being devoted to the mechanisms by which cells receive signals and then translate these into decisions for growth, death, or migration. Recent findings have presented significant breakthroughs in developing a deeper understanding of the activation or repression of target genes and proteins in response to various stimuli and of how they are assembled during signal transduction in cancer cells. Detailed mechanistic insights have unveiled new maps of linear and integrated signal transduction cascades, but the multifaceted nature of the pathways remains unclear. Although new layers of information are being added regarding mechanisms underlying ovarian cancer and how polymorphisms in VDR gene influence its development, the findings of this research must be sequentially collected and re-interpreted. We divide this multi-component review into different segments: how vitamin D modulates molecular network in ovarian cancer cells, how ovarian cancer is controlled by tumor suppressors and oncogenic miRNAs and finally how vitamin D signaling regulates miRNA expression. Intra/inter-population variability is insufficiently studied and a better understanding of genetics of population will be helpful in getting a step closer to personalized medicine.

Microbial linguistics: perspectives and applications of microbial cell-to-cell communication

  • Mitchell, Robert J.;Lee, Sung-Kuk;Kim, Tae-Sung;Ghim, Cheol-Min
    • BMB Reports
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    • v.44 no.1
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    • pp.1-10
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    • 2011
  • Inter-cellular communication via diffusible small molecules is a defining character not only of multicellular forms of life but also of single-celled organisms. A large number of bacterial genes are regulated by the change of chemical milieu mediated by the local population density of its own species or others. The cell density-dependent "autoinducer" molecules regulate the expression of those genes involved in genetic competence, biofilm formation and persistence, virulence, sporulation, bioluminescence, antibiotic production, and many others. Recent innovations in recombinant DNA technology and micro-/nano-fluidics systems render the genetic circuitry responsible for cell-to-cell communication feasible to and malleable via synthetic biological approaches. Here we review the current understanding of the molecular biology of bacterial intercellular communication and the novel experimental protocols and platforms used to investigate this phenomenon. A particular emphasis is given to the genetic regulatory circuits that provide the standard building blocks which constitute the syntax of the biochemical communication network. Thus, this review gives focus to the engineering principles necessary for rewiring bacterial chemo-communication for various applications, ranging from population-level gene expression control to the study of host-pathogen interactions.

A Study on Electronic Structures of Spinel-Type Manganese Oxides for Lithium Ion Adsorbent using DV-Xα Molecular Orbital Method (DV-Xα 분자궤도법을 이용한 리튬이온 흡착제용 스피넬형 망간산화물의 전자상태에 관한 연구)

  • Kim, Yang-Su;Jeong, Gang-Seop;Lee, Jae-Cheon
    • Korean Journal of Materials Research
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    • v.12 no.4
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    • pp.274-278
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    • 2002
  • Discrete-variational(DV)-$X{\alpha}$ method was applied to investigate the electronic structures of spinel- type manganese oxide which is well known to the high performance adsorbent or cathode material for lithium ion. The results of DOS(density of states) and Mulliken population analysis showed that Li was nearly fully ionized and interactions between Mn and O were strong covalent bond. The effective charge of Li and Mn was +0.77 and +1.44 respectively and the overlap population between Mn and O was 0.252 in $LiMn_2O_4$. These results from DV-X$\alpha$ method were well coincided with the experimental result by XPS analysis and supported the feasibility of theoretical interpretation for the $LiMn_2O_4$ compound.

Co-Evolutionary Algorithm and Extended Schema Theorem

  • Sim, Kwee-Bo;Jun, Hyo-Byung
    • Journal of the Korean Society for Industrial and Applied Mathematics
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    • v.2 no.1
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    • pp.95-110
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    • 1998
  • Evolutionary Algorithms (EAs) are population-based optimization methods based on the principle of Darwinian natural selection. The representative methodology in EAs is genetic algorithm (GA) proposed by J. H. Holland, and the theoretical foundations of GA are the Schema Theorem and the Building Block Hypothesis. In the meaning of these foundational concepts, simple genetic algorithm (SGA) allocate more trials to the schemata whose average fitness remains above average. Although SGA does well in many applications as an optimization method, still it does not guarantee the convergence of a global optimum in GA-hard problems and deceptive problems. Therefore as an alternative scheme, there is a growing interest in a co-evolutionary system, where two populations constantly interact and co-evolve in contrast with traditional single population evolutionary algorithm. In this paper we show why the co-evolutionary algorithm works better than SGA in terms of an extended schema theorem. And predator-prey co-evolution and symbiotic co-evolution, typical approaching methods to co-evolution, are reviewed, and dynamic fitness landscape associated with co-evolution is explained. And the experimental results show a co-evolutionary algorithm works well in optimization problems even though in deceptive functions.

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A Hybrid Mechanism of Particle Swarm Optimization and Differential Evolution Algorithms based on Spark

  • Fan, Debin;Lee, Jaewan
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.12
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    • pp.5972-5989
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    • 2019
  • With the onset of the big data age, data is growing exponentially, and the issue of how to optimize large-scale data processing is especially significant. Large-scale global optimization (LSGO) is a research topic with great interest in academia and industry. Spark is a popular cloud computing framework that can cluster large-scale data, and it can effectively support the functions of iterative calculation through resilient distributed datasets (RDD). In this paper, we propose a hybrid mechanism of particle swarm optimization (PSO) and differential evolution (DE) algorithms based on Spark (SparkPSODE). The SparkPSODE algorithm is a parallel algorithm, in which the RDD and island models are employed. The island model is used to divide the global population into several subpopulations, which are applied to reduce the computational time by corresponding to RDD's partitions. To preserve population diversity and avoid premature convergence, the evolutionary strategy of DE is integrated into SparkPSODE. Finally, SparkPSODE is conducted on a set of benchmark problems on LSGO and show that, in comparison with several algorithms, the proposed SparkPSODE algorithm obtains better optimization performance through experimental results.

Knowledge regarding factors that influence fertility in Thai reproductive-age population living in urban area: A cross-sectional study

  • Nakhon, Sarapan Na;Limvorapitux, Pawan;Vichinsartvichai, Patsama
    • Clinical and Experimental Reproductive Medicine
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    • v.45 no.1
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    • pp.38-43
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    • 2018
  • Objective: To survey knowledge about the factors that influence fertility in a reproductive-age population living in an urban area. Methods: A cross-sectional study was conducted using a questionnaire-based survey among both males and females aged 18-45 years living in the Bangkok metropolitan area. Results: The mean age of the participants was $26.8{\pm}7.2years$ (male, 41.9%; female, 58.1%). Of the participants, 53.1% had an undergraduate degree and 57.1% were single. Only one-fifth of the participants correctly identified the age when fecundity declines in male and female, the definition of infertility, and the period during the menstrual cycle with the highest chance of pregnancy. Approximately three-fourths of the participants correctly identified that cigarette smoking, alcohol consumption, and sexually transmitted infections affect fertility. Conclusion: A considerable knowledge gap about the factors that influence fertility was identified in reproductive-age individuals in an urban area of Thailand. This issue should be urgently addressed by promoting fertility awareness through education, discussions about social perceptions regarding fertility, and reliable sources of knowledge.

Effect of Scutellariae Radix extract on immune cells in OVA-induced asthmatic mice lung tissue (황금이 천식모델 생쥐의 폐조직내 면역세포에 미치는 영향)

  • Park, Gil-Byung;Park, Yang-Chun
    • Journal of Haehwa Medicine
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    • v.14 no.1
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    • pp.35-42
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    • 2005
  • Objective : The purpose of this research is to examine the effects of Scutellariae Radix(SR) extract on immune cells in ovalbumin(OVA)-induced asthmatic mice. Methods : In vitro, C57BL/6 mice were exposed to OVA for 6 weeks. The mice lungs were taken out, chopped, grinded with collagenase and activated by rIL-3/rIL-5. The lung cells were treated with SR extract and analyzed by a flow cytometer. Results : The population of granulocytes/lymphocytes, CD3e-/CCR3+, CD69+/CD3e+, CD23+/B220+, CD4+ cells in the SR group in vitro decreased and population of CD8+ cells in the 100 and $10{\mu}g/m{\ell}$ SR group in vitro decreased, compared with that of control group. Conclusion : The results of this study support a role for SR as an effective treatment for asthma in its experimental success in significantly decreasing inflammation and asthma reactions.

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Growth Rate, Sex Ratio, Age Structure and Mating Period of Korean Crayfish Cambaroides similis Natural population (한국산 가재 Cambaroides similis 자연 개체군의 성장률, 암수비율, 연령구조 및 교미시기)

  • Jung, Jae-Ho;Kim, Min-Seop;Ahn, Dong-Ha;Min, Gi-Sik
    • Journal of Aquaculture
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    • v.22 no.1
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    • pp.16-22
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    • 2009
  • Life history of Korean crayfishes Cambaroides similis (Koelbel) was studied 8 month from March to October, 2006 from the Gwanak mountain, Seoul, South Korea. By capture and recapture method, 551 crayfishes were collected analyzed during the experimental period. Based on the distribution pattern of body lengths, the local population putatively divided into four age groups. The sex ratio of male and female was almost equal. However, their growth rates varied by water temperature. Early juveniles seen during June became adult during August. The study findings suggest that late autumn is mating season.

Current Status of Contraception

  • Park, Ki-Hyun
    • Clinical and Experimental Reproductive Medicine
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    • v.13 no.2
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    • pp.95-100
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    • 1986
  • During the past decade great advance has been made in contraceptive technology. The development and subsequent modification of oral steroid contraceptive together with the improved design of other contraceptives have tremendously altered the contraceptive practise of complete throughout the world. At the present time one of most complex issue is the population explosion. In Korea the population growth rate is remarkably decreased from 3% in 1960s to 1.7% in 1984. Increasing proportion of women practising family planning and improved contraceptive methods have contributed on remarkable reduction of fertility rate. But still about half of married women not involved in family planning practise. One of the reasons why that so many women haven't participated in family planning should be undesirable side effects or inconvenience of currently available contraceptives. So we need more research to develop newer, safer and more effective contraceptive to solve the problems. According to recent report on the family planning program achievement in Korea, sterilization (male and female) is most popular, leading contraceptive method (330 cases/1000 fertile persons) and the I.U.D. (167.5/1000), condom (132.9/1000) and oral pill (61.1/1000) were followed by in the order of favorite choice of contraceptive (KIPH, Family planning evaluation report, 1984; KIPH Family plan Service Statistics, 1981-1984). In present paper the present status and knowledge of contraceptives will be summarized.

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Microbiological studies on the preservation of fish-paste products (생선묵의 보장성에 관한 세균학적 연구)

  • 안철우
    • Korean Journal of Microbiology
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    • v.9 no.2
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    • pp.47-54
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    • 1971
  • This study is concerned to the microbial population and its effects in the fish paste products. Experimental results were summarized as following orders ; 1) The number of bacteria in accordance with raw materials and coocking site waas known to as ; Wheat flor - $7.0{\times}10^8$/gram , Brayed fish meat - $2.0{\times}10^7$/gram, Cooking table - $6.1{\times}10^6$/$1.54cm^2$Chopped fish meat -$4.1{\times}10^6$/gram, Wooden plate - $5.5{\times}10^5$/218.32cm, Sodium chloride - $8.8{\times}10^4$/gram, Wheat starch - $4.5{\times}10^4$/gram, Fish meat - $2.3{\times}10^4$/gram. However, there were a few bacterial numbers less than 300 per gram of raw materials, such as monosodium glutamate, tap water, sugar, saccharine and eggs. 2) Bacterial population in the raw materials might be changed according to the conditions of preservation. 3) When the heat tratment is used for the preservation, the thermal effects were rarely found at the interior part of fish paste products. Conduction of heat into the interior part dose not rise about $84^{\circ}C$ and the survival of bacteria could be possible under the condition. Therefore, cooking being used requires further studies. 4) Number of bacteria in the fish paste products sold in the market was higher on April and May than those on June. Especially on June, the number of bacteriz in the interior part were found higher than those in the exterior part of the products.

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