• 제목/요약/키워드: evolutionary origin

검색결과 52건 처리시간 0.024초

해상 가두리 양식장 암모니아 모니터링 시스템 개발 (Development of the Monitoring System for Ocean Fish Farm)

  • 오진석;조관준;곽준호;진선호;이종호
    • 한국마린엔지니어링학회:학술대회논문집
    • /
    • 한국마린엔지니어링학회 2006년도 전기학술대회논문집
    • /
    • pp.273-274
    • /
    • 2006
  • The sea is origin of all lift, and 90% of the all living organisms are in the sea. The biosynthesis is very different. Many organisms are kept on a lower or developed to another evolutionary level than on shore. Our society is increasing demand and need for marine food and this food has to product at onshore or offshore fish farming sites. Ocean fish farms have a special operation properties such as a good quality water, net cage, sheltered locations and feeding system. The farming site is controlled and monitored for fish welfare as ammonia($NH_3$), temperature, the speed of a running fluid. Specially, the fish farm is seriously influenced by ammonia. In this paper, $NH_3$ monitoring system for ocean fish farm is researched for the suitable fish farming sites, and test equipment is designed for achieving practical data. The equipment wit monitoring algorithm is expected to the useful system for ocean fish farm.

  • PDF

Comparison of Biochemical and Immunological Properties Between Rat and Nicotiana glutinosa Ornithine Decarboxylase

  • Lee, Yong-Sun;Cho, Young-Dong
    • BMB Reports
    • /
    • 제34권5호
    • /
    • pp.408-414
    • /
    • 2001
  • Ornithine decarboxylase (EC 4.1.1.17) is an essential enzyme for polyamine synthesis and growth in mammalian cells and plants. We compared the biochemical and immunological properties of rat and Nicotiana glutinosa ODC by cloning and expressing the recombinant proteins. The primary amino acid sequence between rat and N. glutinosa ODC had a 40% homology The molecular weight of the overexpressed rat ODC was 53 kDa, and that of N. glutinosa was 46.5 kDa. Adding 1 mM of putrescine to the enzyme reaction mixture inhibited both rat and N. glutinosa ODC activity to 30%. Agmatine had an inhibitory effect only on N. glutinosa ODC. Cysteine and lysine modifying reagents reduced both ODC activities, verifying the key roles of cysteine and lysine residues in the catalytic mechanism of ODC. ELISA was performed to characterize the immunological difference between the rat and plant ODC. Both the rat and N. glutinosa ODC were recognized by the polyclonal antibody that was raised against purified N. glutinosa ODC, but the rat ODC was 50-fold less sensitive to the antibody binding. These results indicate that even though both ODCs have the same evolutionary origin, there seems to be a structural distinction between the species.

  • PDF

Omega Rhodopsins: A Versatile Class of Microbial Rhodopsins

  • Kwon, Soon-Kyeong;Jun, Sung-Hoon;Kim, Jihyun F.
    • Journal of Microbiology and Biotechnology
    • /
    • 제30권5호
    • /
    • pp.633-641
    • /
    • 2020
  • Microbial rhodopsins are a superfamily of photoactive membrane proteins with the covalently bound retinal cofactor. Isomerization of the retinal chromophore upon absorption of a photon triggers conformational changes of the protein to function as ion pumps or sensors. After the discovery of proteorhodopsin in an uncultivated γ-proteobacterium, light-activated proton pumps have been widely detected among marine bacteria and, together with chlorophyll-based photosynthesis, are considered as an important axis responsible for primary production in the biosphere. Rhodopsins and related proteins show a high level of phylogenetic diversity; we focus on a specific class of bacterial rhodopsins containing the '3 omega motif.' This motif forms a stack of three non-consecutive aromatic amino acids that correlates with the B-C loop orientation and is shared among the phylogenetically close ion pumps such as the NDQ motif-containing sodium-pumping rhodopsin, the NTQ motif-containing chloride-pumping rhodopsin, and some proton-pumping rhodopsins including xanthorhodopsin. Here, we reviewed the recent research progress on these 'omega rhodopsins,' and speculated on their evolutionary origin of functional diversity.

Multiple Gonadotropin-Releasing Hormone Neuronal Systems in Vertebrates

  • Parkhar, lshwar S.
    • Animal cells and systems
    • /
    • 제3권1호
    • /
    • pp.1-7
    • /
    • 1999
  • Gonadotropin-releasing hormone (GnRH) was originally isolated as a hypothalamic peptide that regulates reproduction by stimulating the release of gonadotropins. Using comparative animal models has led to the discovery that GnRH has a more ancient evolutionary origin. Durinq evolution GnRH peptide underwent gene duplication and structural changes to give rise to multiple molecular forms of GnRHs. Mammalian GnRH initially considered to be the sole molecular form, is now grouped as a family of peptides along with GnRH variants determined from representatives in all classes of vertebrates. Vertebrate species including primates and humanshave more than one GnRH variant in individual brains; a unique GnRH form in the forebrain and chicken IIGnRH in the midbrain. Furthermore, several species of bony fish have three molecular variants of GnRH: salmon GnRH sea-bream GnRH and chicken II GnRH. Also, it has been shown that in addition to the olfactory placodes and the midbrain, there is a third embryonic source of GnRH neurons from the basal diencephalon in birds and fish, which might be true for other vertebrates. Therefore, comparative animal models like fish with discrete sites of expression of three molecular variants of GnRH in individual brains, could provide insight into novel functions of GnRH variants, conservation of gene regulation, and mechanisms governing reproduction in vertebrates.

  • PDF

Spatial and Temporal Genetic Diversity and Population Structure of Hemileia vastatrix from Peruvian Coffee Plantations

  • Quispe-Apaza, Cinthia;Mansilla-Samaniego, Roberto;Espejo-Joya, Rosa;Bernacchia, Giovanni;Yabar-Larios, Marisela;Lopez-Bonilla, Cesar
    • The Plant Pathology Journal
    • /
    • 제37권3호
    • /
    • pp.280-290
    • /
    • 2021
  • Population genetic studies of Hemileia vastatrix have been conducted in order to describe the evolutionary dynamics of the pathogen and the disease epidemiology as consequence of changes in disease management and host distribution occurred in Peru after the 2013 epidemic. These analyses were performed by sequencing the internal transcribed spacers of the nuclear ribosomal DNA (rDNA-ITS) of H. vastatrix collected from two coffee growing areas in 2014 and 2018. H. vastatrix population showed high haplotype diversity (Hd = 0.9373 ± 0.0115) with a low nucleotide diversity (π = 0.00322 ± 0.00018). Likewise, AMOVA indicated that fungus population has behaved as a large population without structuring by geographical origin and sampling years (FST = 0.00180, P = 0.20053 and FST = 0.00241, P = 0.19693, respectively). Additionally, the haplotype network based on intraspecific phylogenetic analysis of H. vastatrix using Peruvian and NCBI sequences revealed that Peruvian ancestral haplotypes, which were maintained in time and space, would correspond to the reported sequences of the races II and XXII. This result suggests that no substantial changes have occurred through time in Peruvian Hemileia vastatrix population.

A genetic approach to comprehend the complex and dynamic event of floral development: a review

  • Jatindra Nath Mohanty;Swayamprabha Sahoo;Puspanjali Mishra
    • Genomics & Informatics
    • /
    • 제20권4호
    • /
    • pp.40.1-40.8
    • /
    • 2022
  • The concepts of phylogeny and floral genetics play a crucial role in understanding the origin and diversification of flowers in angiosperms. Angiosperms evolved a great diversity of ways to display their flowers for reproductive success with variations in floral color, size, shape, scent, arrangements, and flowering time. The various innovations in floral forms and the aggregation of flowers into different kinds of inflorescences have driven new ecological adaptations, speciation, and angiosperm diversification. Evolutionary developmental biology seeks to uncover the developmental and genetic basis underlying morphological diversification. Advances in the developmental genetics of floral display have provided a foundation for insights into the genetic basis of floral and inflorescence evolution. A number of regulatory genes controlling floral and inflorescence development have been identified in model plants such as Arabidopsis thaliana and Antirrhinum majus using forward genetics, and conserved functions of many of these genes across diverse non-model species have been revealed by reverse genetics. Transcription factors are vital elements in systems that play crucial roles in linked gene expression in the evolution and development of flowers. Therefore, we review the sex-linked genes, mostly transcription factors, associated with the complex and dynamic event of floral development and briefly discuss the sex-linked genes that have been characterized through next-generation sequencing.

Diversity and origin of bottle gourd, Lagenaria

  • Yuasa, Hiroshi
    • 한국자원식물학회:학술대회논문집
    • /
    • 한국자원식물학회 2002년도 심포지엄
    • /
    • pp.96-97
    • /
    • 2002
  • Bottle gourd, Lagenaria siceraria, is one of the oldest cultivated plants. To bigin with, its fruit was used as a complete liquid bottle or container. It was a very widespread cultivated plant in prehistoric times, for example (there) is a report from Peru as early as between 13,000 B.C and 11,000 B.C. The dug-out finds in Japan proved to be about 95,000 years old according to the /sup 14/C analysis. The bottle grourd was the most important plant before the invention of pottery in many areas of Asia, New Guinea, Polynesia, America, and Africa. I would like to suggest that there should be "The Bottle Gourd Age" prior to the Pottery Age. Bottle gourds are also used for various purposes such as food, masks, pipes, musical instruments, medicine, symbols, artistic products and also as penis-sheaths of men's attire. Their purposes number more than 220 including 70 varienties of containers or bottles. I consider that its utilization should be called a culture, as it were, "The gourd culture." The shape and the size of the fruit of bottle gourd have a larger variety than those of any other plant. As for the size, it is reported that they range from those that are shorter than 3cm to those that are ovoid and longer than 60cm in diameter. With regard to the shape of its fruit, the bottle gourd can be classified into 7 groups and even more than 30 races, considering the difference of the size. The seeds are so variable without two horn-like projections, with smooth surface or longitudinalines, white or brown, with smooth corky margin. Generally, it seems that there is no correlation between seem shape and fruit shape. My study shows that the seeds of gourd. My study shows that the seeds of gourd in Asia are so simple in shape and in color except for the size. But the seeds of those in Africa are various and seem to be beyond the confines. Explaining the great diversity of the seeds of those in Africa therefore, they appear to have no correlation among the types of fruit of the bottle gourd with African origin. It might be supposed that another 4 wild Lagenaria spp. distribute only in Africa. The intraspecies hybrid is confirmed between the bottle gourd, Lagenaria siceraria, and wild L. spehaerica. And Fl hybrid is sterile: it has no fertility. However, even though the shapes of the fruit and the seeds are different, they can cross with each other. Moreover, their hybrids grow up to be extremely vigorous and have normal fertility. Fruit shapes of Fl plants are similar to those of their parents, if they have the same character. Whereas, the fruit shape often became different from each other when the cross occurs between those with different fruit shapes. It is shown that dumbbell shapes, HYOTAN in Japanese, is recessive while its bitterness is dominant. Thus the character of F2 hybrids Is segregative. I'll give further particulars of the heredity of the groud in my lecture.

  • PDF

Molecular Phylogenetic Analysis of HIV -1 vif Gene from Korean Isolates

  • Park, Chan-Seung;Kim, Mi-Sook;Lee, Sung-Duk;Kim, Sung-Soo;Lee, Keon-Myung;Lee, Chan-Hee
    • Journal of Microbiology
    • /
    • 제44권6호
    • /
    • pp.655-659
    • /
    • 2006
  • Phylogenetic studies of nef, pol, and env gene sequences of HIV-1 isolated from Koreans suggested the presence of a Korean clade in which Korean sequences are clustered to the exclusion of foreign sequences. We attempted to identify and characterize the Korean clade using all vif gene sequences isolated from Koreans registered in the NCBI GenBank database (n = 233). Most (77 %) of the Korean isolates belonged to the Korean clade as a large subcluster in subtype B, designated the Korean clade subtype B ($K_{C}B$). $K_{C}B$ sequences were relatively homogenous compared to Korean subtype B sequences that did not belong to the $K_{C}B$ (non-Korean clade subtype B; $NK_{C}B$). Comparison of amino acid frequencies of $K_{C}B$ and $NK_{C}B$ sequences revealed several positions where the amino acid frequencies were significantly different. These amino acid residues were critical in separating $K_{C}B$ from $NK_{C}B$ or from foreign sequences, since substitution of these amino acids in $K_{C}B$ with the $NK_{C}B$ amino acids relocated the $K_{C}B$ sequences to $NK_{C}B$, and vice versa. Further analyses of $K_{C}B$ will help us to understand the origin and evolutionary history of $K_{C}B$.

CALS/EC 개발 프로세스 표준화 발전방향 (CALS/EC Development Process Standardization Progress Direction)

  • 최헌준;이윤희
    • 한국전자거래학회:학술대회논문집
    • /
    • 한국전자거래학회 1998년도 학술대회지 vol.1
    • /
    • pp.149-161
    • /
    • 1998
  • 본고에서는 CALS/EC 개발전략의 일환으로 소프트웨어 프로세스 수명주기 중 국제표준인 ISO/IEC 12207과 현재 미 국가 표준으로 채택된 IEEE/EIA 12207에 관하여 고찰해보고, ISO/IEC 12207의 모체라 할 수 있는 미국방성의 소프트웨어 개발 프로세스인 MIL-STD-498과 비교분석 하였다. 또한 현재 국내 국방분야에서 적용하고 있는 소프트웨어 수명주기 프로세스에 조명해보았다. MIL-STD-498을 근간으로 한 국방분야의 소프트웨어 수명주기 프로세스는 그 내용이 아직도 반복개발의 개념이나 프로젝트 특성에 따른 프로세스의 관리 등 새로운 개발 철학들을 수용하고 있지 못한 실정이다. 본 연구에서는 현 국방분야의 소프트웨어 수명주기 프로세스의 개선안으로 프로세스를 재정립한 후, 점진적 개발접근방법, 진화적 개발접근 방법의 수용과 프로세스의 특성에 따라 프로세스들을 선택. 적용할 수 있는 MIL-STD-498을 기반으로 한 테일러링 방법을 제시하였다.

  • PDF

Ultraviolet Color-Magnitude Relations of Early-type Dwarf Galaxies in the Viro Cluster

  • Kim, Suk;Rey, Soo-Chang;Sung, Eon-Chang;Jerjen, Helmut;Lisker, Thorsten;Lee, Youngdae;Chung, Jiwon;Yi, Wonhyeong;Park, Mina
    • 천문학회보
    • /
    • 제38권2호
    • /
    • pp.47.2-47.2
    • /
    • 2013
  • We present ultraviolet (UV) color-magnitude relations (CMRs) of early-type dwarf galaxies in the Viro cluster, combining Galaxy Evolution Explorer (GALEX) UV data with SDSS optical data, based on the Extended Virgo Cluster catalog (EVCC). We find that dwarf lenticular galaxies (dS0s) show a surprisingly distinct and tight locus separated from that of ordinary dEs, which is not clearly seen in previous CMRs. The dS0s in UV CMRs follow a steeper sequence than dEs and show bluer UV-optical color at a given magnitude. We explore the observed CMRs with population models of a luminosity-dependent delayed exponential star formation history. The observed CMR of dS0s is well matched by models with relatively long delayed star formation. The dS0s are most likely transitional objects at the stage of subsequent transformation of late-type progenitors to ordinary red dEs in the cluster environment. Most early type dwarf galaxies with blue UV colors (FUV-r < 6 and NUV-r < 4) are identified as those showing spectroscopic hints of recent or ongoing star formation activities. In any case UV photometry provides a powerful teel to disentangle the diverse subpopulations of early-type dwarf galaxies and uncover their evolutionary histories. lenticular galaxies, and irregular high surface brightness (HSB) galaxies, respectively. Dwarf elliptical galaxies and dwarf irregular LSB galaxies occupy the similar structural parameter spaces. We suggest that giant elliptical galaxies and dwarf elliptical galaxies may have different origin.

  • PDF