• Title/Summary/Keyword: ermK

Search Result 111, Processing Time 0.029 seconds

Enhancement of Herboxidiene Production in Streptomyces chromofuscus ATCC 49982

  • Jha, Amit Kumar;Lamichhane, Janardan;Sohng, Jae Kyung
    • Journal of Microbiology and Biotechnology
    • /
    • v.24 no.1
    • /
    • pp.52-58
    • /
    • 2014
  • Structurally, herboxidiene contains the tetrahydropyran acetic acid moiety and a side chain including a conjugated diene, and has been isolated from Streptomyces chromofuscus ATCC 49982. Its production was significantly elevated nearly 13.5-fold (0.74 g/l) in a medium supplemented with glycerol (medium No. 6A6), and was more efficacious (1.08 g/l; 19.8-fold) in fed-batch fermentation at 36 h in medium No. 6A6, from Streptomyces chromofuscus. For further enhancement, regulatory genes metK1-sp and afsR-sp from Streptomyces peucetius were overexpressed using an expression vector, pIBR25, and similarly ACCase from Streptomyces coelicolor and two genes, metK1-sp and afsR-sp, were also overexpressed using an integration vector, pSET152, under the control of the strong $ermE^*$ promoter in Streptomyces chromofuscus. Only the recombinant strains S. chromofuscus SIBR, S. chromofuscus GIBR, and S. chromofuscus AFS produced more herboxidiene than the parental strain in optimized medium No. 6A6 with an increment of 1.32-fold (0.976 g/l), 3.85-fold (2.849 g/l), and 1.7-fold(1.258 g/l) respectively.

Effect of Antibiotic Down-Regulatory Gene wblA Ortholog on Antifungal Polyene Production in Rare Actinomycetes Pseudonocardia autotrophica

  • Kim, Hye-Jin;Kim, Min-Kyung;Kim, Young-Woo;Kim, Eung-Soo
    • Journal of Microbiology and Biotechnology
    • /
    • v.24 no.9
    • /
    • pp.1226-1231
    • /
    • 2014
  • The rare actinomycete Pseudonocardia autotrophica was previously shown to produce a solubility-improved toxicity-reduced novel polyene compound named $\underline{N}ystatin$-like $\underline{P}seudonocardia$ $\underline{P}olyene$ (NPP). The low productivity of NPP in P. autotrophica implies that its biosynthetic pathway is tightly regulated. In this study, $wblA_{pau}$ was isolated and identified as a novel negative regulatory gene for NPP production in P. autotrophica, which showed approximately 49% amino acid identity with a global antibiotic down-regulatory gene, wblA, identified from various Streptomycetes species. Although no significant difference in NPP production was observed between P. autotrophica harboring empty vector and the S. coelicolor wblA under its native promoter, approximately 12% less NPP was produced in P. autotrophica expressing the wblA gene under the strong constitutive $ermE^*$ promoter. Furthermore, disruption of the $wblA_{pau}$ gene from P. autotrophica resulted in an approximately 80% increase in NPP productivity. These results strongly suggest that identification and inactivation of the global antibiotic down-regulatory gene wblA ortholog are a critical strategy for improving secondary metabolite overproduction in not only Streptomyces but also non-Streptomyces rare actinomycete species.

The First Korean Case of Nontuberculous Mycobacterial Lung Disease Caused by Mycobacterium abscessus Subspecies bolletii in a Patient with Bronchiectasis

  • Jeong, Byeong-Ho;Kim, Su-Young;Jeon, Kyeongman;Huh, Hee Jae;Ki, Chang-Seok;Lee, Nam Yong;Shin, Sung Jae;Koh, Won-Jung
    • Tuberculosis and Respiratory Diseases
    • /
    • v.76 no.1
    • /
    • pp.30-33
    • /
    • 2014
  • We report the first Korean case of lung diseases caused by Mycobacterium abscessus subsp. bolletii in a previously healthy male, except for a previous history of pulmonary tuberculosis and bronchiectasis. All serial isolates are identified as M. abscessus subsp. bolletii by multi-locus sequence analysis based on the hsp65, rpoB, and 16S rRNA fragments. At the genetic level, the isolate has the erm(41) gene with a T28 sequevar, associated with clarithromycin resistance, and no rrl mutation. The isolate is resistant to clarithromycin. Although the symptoms and radiographic findings have improved after combination of antibiotics, the follow-up sputum cultures are persistently positive.

Increased store-operated Ca2+ entry mediated by GNB5 and STIM1

  • Kang, Namju;Kang, Jung Yun;Park, Soonhong;Shin, Dong Min
    • The Korean Journal of Physiology and Pharmacology
    • /
    • v.22 no.3
    • /
    • pp.343-348
    • /
    • 2018
  • Recent human genetic studies have shown that $G{\beta}5$ is related to various clinical symptoms, such as sinus bradycardia, cognitive disability, and attention deficit hyperactivity disorder. Although the calcium signaling cascade is closely associated with a heterotrimeric G-protein, the function of $G{\beta}5$ in calcium signaling and its relevance to clinical symptoms remain unknown. In this study, we investigated the in vitro changes of store-operated calcium entry (SOCE) with exogenous expression of $G{\beta}5$. The cells expressing $G{\beta}5$ had enhanced SOCE after depletion of calcium ion inside the endoplasmic reticulum. $G{\beta}5$ also augmented Stim1- and Orai1-dependent SOCE. An ORAI1 loss-of-function mutant did not show inhibition of $G{\beta}5$-induced SOCE, and a STIM1-ERM truncation mutant showed no enhancement of SOCE. These results suggested a novel role of GNB5 and Stim1, and provided insight into the regulatory mechanism of SOCE.

Estimation of Optimum PM2.5 Ionic Concentration Control Strategy for Reducing Fine Particle Mass Concentrations in Seoul (서울시 초미세먼지 질량농도 저감을 위한 입자 내 이온성분 최적감축방법 예측)

  • Kim, Jung Youn;Lee, Ji Won;Kim, Yong Pyo
    • Particle and aerosol research
    • /
    • v.6 no.4
    • /
    • pp.151-164
    • /
    • 2010
  • Inorganic ions and water are major components of ambient fine particles. Water content in fine particles is mainly determined by ambient meteorological conditions and the concentrations of hygroscopic species such as inorganic ions. Thus, to reduce fine particle mass concentration, it is important to accurately estimate the relationship between water content and the concentration of ions in fine particles. Water content in fine particles in Seoul are estimated by using a gas/particle equilibrium model to understand the characteristics of fine particle mass concentration. In addition, sensitivity of fine particle mass concentration to the changes of particulate ionic species (sulfate, nitrate, and ammonium) is estimated. It was found that water content in Seoul is mostly determined by the concentrations of the hygroscopic ionic species, especially, sulfate and ammonium, and ambient relative humidity.

Ecological Recovery of Contaminated Dredged Materials in Masan Bay, Korea (마산만 오염 준설토사의 생태회복)

  • Lee, Chan-Won;Jeon, Hong-Pyo;Ha, Kyung-Ae
    • Journal of Environmental Science International
    • /
    • v.17 no.1
    • /
    • pp.29-36
    • /
    • 2008
  • A large amount of $2.1{\times}10^6m^3$ of polluted sediment was dredged from the Masan Bay and deposited in Gapo confined area, Masan, Korea. The six representative sediments were obtained and analyzed for issue components. The data was discussed with the species of benthos and their distribution. It was judged that toxicological effects of sediment analyzed ranged from ERL to ERM with copper and zinc, and ERL with cadmium, chrome, lead and nickel by the Adverse Biological Effects. The dredging index (DI) of sediments stabilized for 10 years since dumping the confined site was calculated and compared with the DI values of dredged sediment itself. DI values decreased from 0.67 to $0.07{\sim}0.18$, which reflects DI value less than 0.2 is good for benthos in the sediment by the natural recovery of dredged materials. The ecological recovery was confirmed in this confined area as a habitat of benthic organisms.

Heterologous Expression of Novel Cytochrome P450 Hydroxylase Genes from Sebekia benihana

  • Park Nam-Sil;Park Hyun-Joo;Han Kyu-Boem;Kim Eung-Soo
    • Journal of Microbiology and Biotechnology
    • /
    • v.16 no.2
    • /
    • pp.295-298
    • /
    • 2006
  • Actinomycetes are ubiquitous Gram-positive soil bacteria and a group of the most important industrial microorganisms for the biosynthesis of many valuable secondary metabolites as well as the source of various bioconversion enzymes. Cytochrome P450 hydroxylase (CYP), a hemebinding protein, is known to be involved in the modification of various natural compounds, including polyketides, fatty acids, steroids, and some aromatic compounds. Previously, six different novel CYP genes were isolated from a rare actinomycetes called Sebekia benihana, and they were completely sequenced, revealing significant amino acid similarities to previously known CYP genes involved in Streptomyces secondary metabolism. In the present study, these six CYP genes were functionally expressed in Streptomyces lividans, using an $ermE^{*}$ promoter-containing Streptomyces expression vector. Among six CYP genes, two S. benihana CYP genes (CYP503 and CYP504) showed strong hydroxylation activities toward 7-ethoxycoumarin. Furthermore, the recombinant S. lividans containing both the S. benihana CYP506-ferredoxin genes as well as the S. coelicolor feredoxin reductase gene also demonstrated cyclosporin A hydroxylation activity, suggesting potential application of actinomycetes CYPs for the biocatalysts of natural product bioconversion.

$\"{U}ber$ die kommunikative Funktion von Blickverhalten (시선의 의사소통 기능)

  • Kim Kab-Nyun
    • Koreanishche Zeitschrift fur Deutsche Sprachwissenschaft
    • /
    • v.3
    • /
    • pp.57-74
    • /
    • 2001
  • Kommunikation macht 'gemeinschaftlich'. Sie erscheint v.a. als verbale, d.h. als lautliche und davon abgeleitete Sprache. Lautliche Sprache wird artikulatorisch produziert, akustisch transportiert und auditiv wahrgenommen. Was auch immer ein Mensch einem anderen mitteilen mag, wird ein geringer Teil seiner Botschaft durch Sprache kommuniziert. Neben den akustisch vermittelten Signalen $k\"{o}nnen$ auch nicht-vokale, visuell wahmehmbare Verhaltensweisen eines Interaktanden $f\"{u}r$ einen Beobachter Kommunikationswert annehmen. Der $Kommuni-kationsproze{\ss}$ wird nicht nur durch Senden und Empfangen von akustischen Signalen konstituiert, sondern auch auf der optischen Ebene der gegenseitigen Wahmehmung etabliert. Deshalb sagt man, es sei unmoglich, nicht zu kommunizieren. Denn nicht nur Worte sind das Material jeglicher Kommunikation, sondern auch alle paralinguistischen Phanomene (wie z.B. Tonfall, Schnelligkeit oder Langsarnkeit der Sprache, Pausen, Lachen und Seufzen usw.), $K\"{o}rferhaltung$ usw. In der vorligenden Arbeit bin ich darauf eingegangen, wie die Blickrichtungen einer Person von einem $Gegen\"{u}ber$ sowie einem unbeteiligten Beobachter beurteilt werden. Dabei habe ich versucht zu $erl\"{a}utern$, welche Ursache und Bedeutung das Blickverhalten in der sozialen Interaktion hat. Und mit der Frage, wie dieses Verhalten wahrzunehmen und zu interpretieren ist, habe ich mich $besch\"{a}ftigt$. Die indikative Funtion des Blickverhaltens durch Zu- oder Abwenden des Blickes wurde dabei festgestellt. 'Die Sprache der Augen', 'die Kommunikation mit Augen' scheint eine Vielzahl von Mitteilungen an den sozialen Partnern zu $erm\"{o}glichen$. Die Bedeutung der einzelnen Blicken sind interkulturell verschieden, die Blickverhalten sind teils angeboren, oder sie $m\"{u}ssen$ gelemt werden.

  • PDF

Evaluation of Heavy Metal Pollution in the Dumping Site of the Dredged Sediment, Masan Bay (마산만 오염퇴적물 준설토 투기해역의 중금속 오염평가)

  • Kwon Young-Tack
    • Journal of the Korean Society for Marine Environment & Energy
    • /
    • v.7 no.2
    • /
    • pp.75-81
    • /
    • 2004
  • A large amount 2.1×106 ㎥ of the polluted sediment was dredged from the Masan Bay and deposited in Gapo confined area, Masan. The dissolved metal concentrations of seawater in the dumping site (Gapo area) were observed during one tidal cycle and compared with those of seawater obtained from Jinhae Bay. The sediment was evaluated as from Non polluted to Moderately polluted by USEPA standards. It was judged that toxicological effects of sediment analyzed ranged from ERL to ERM with copper and zinc, and ERL with cadmium, chrome, lead, and nickel by the Adverse Biological Effects. The pollutant concentration was low in surface sediment compared to deeper sediment since the sediments with relatively low concentrations of pollutant were dumped to the surface. The pollutant concentration was low in surface sediment compared to deeper sediment since the sediments with relatively low concentrations of pollutant were dumped to the surface. The benthic organisms in Gapo area had higher concentrations of trace metals (Oyster: Zn 238.96, Cu 5.29 ㎍/g wet wt., Clam: Zn 17.71, Cu 1.00 ㎍/g wet wt., Mussel. Zn 187.98, Pb 0.28, Cr 0.15, Mn 4.23, Sr 1.45 and Fe 100.33 ㎍/g wet wt.) compared to outside of dumping site. However, the trace metal level in the bivalves was less than the NFPQIS (National Fisheries Products Quality Inspection Service) standard.

  • PDF

Emergence of macrolide resistance and clinical use of macrolide antimicrobials in children (Macrolide계 항균제 내성 출현과 소아에서의 임상적 적용)

  • Choi, Eun Hwa
    • Clinical and Experimental Pediatrics
    • /
    • v.51 no.10
    • /
    • pp.1031-1037
    • /
    • 2008
  • Macrolide antimicrobial agents including erythromycin, roxithromycin, clarithromycin, and azithromycin are commonly used in the treatment of respiratory tract infections in children. Newer macrolides that have structural modifications of older drug erythromycin show improved change in the spectrum of activity, dosing, and administration. However, recent studies reported that increasing use of macrolide antibiotics is the main force driving the development of macrolide resistance in streptococci. In particular, azithromycin use is more likely to select for macrolide resistance with Streptococcus pneumoniae than is clarithromycin use, a possible reflection of its much longer half life. Recently, erythromycin resistance rates of S. pneumoniae and Streptococcus pyogenes are rapidly increasing in Korea. Two main mechanisms of acquired macrolide resistance have been described, altered binding site on the bacterial ribosome encoded by the ermB gene and active macrolide efflux pump encoded by the mef gene. Relationship between the susceptibility of S. pneumoniae and the response to macrolides has been shown in studies of acute otitis media, but less clear in cases of pneumonia. This article reviews the spectrum of activity, pharmacokinetic properties, mechanisms of action and resistance, and clinical implication of resistance on the treatment of respiratory tract infections in children.