• Title/Summary/Keyword: enhancer

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Action Mechanism of Enhancers for Activating Gene Transcription

  • Yea Woon Kim;AeRi Kim
    • Biomedical Science Letters
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    • v.29 no.3
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    • pp.103-108
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    • 2023
  • Enhancers are cis-elements to regulate transcription of cell/tissue-specific genes in multicellular organisms. These elements locate in upstream or downstream regions of target genes and are found in a long distance up to 100 Kb in some cases. Transcription factors and coactivators bind to enhancers in a chromatin environment. Enhancers appear to facilitate the transcription of target genes by communicating with promoters and activating them. As transcription activation mechanism of enhancers, chromatin looping between enhancers and promoters, tracking of enhancer activity to promoters along the intervening regions, and movement of enhancers and promoters into transcription condensates have been suggested based on various molecular and cellular biology studies. These mechanisms are likely to act together rather than exclusive each other for gene transcription. Understanding of enhancer action mechanism may provide a way to regulate the transcription of cell/tissue-specific genes relating with aging or various diseases.

Microbiota and Physicochemical Analysis on Traditional Kocho Fermentation Enhancer to Reduce Losses (Gammaa) in the Highlands of Ethiopia

  • Dibaba, Adane Hailu;Tuffa, Ashenafi Chaka;Gebremedhin, Endrias Zewdu;Nugus, Gerbaba Guta;Gebresenbet, Girma
    • Microbiology and Biotechnology Letters
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    • v.46 no.3
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    • pp.210-224
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    • 2018
  • Warqe (Ensete ventricosum) has been traditionally fermented in an earthen pit to yield a carbohydrate-rich food product named kocho, for generations. A fermentation enhancer (gammaa) was added to this fermenting mass to enhance the fermentation process. The objectives of this study were to assess the physicochemical properties and microbiota of the kocho fermentation enhancer culture to reduce losses. Cross-sectional study design was implemented to collect 131 gammaa samples on the first day of fermentation. The samples were further classified into four groups according to the duration of fermentation (14, 21, 30, and 60 days) practised in various households traditionally. The results showed that the fermentation time significantly affected the physicochemical properties and microbial load of gammaa (p < 0.01). As the fermentation progressed from day 1 to 60, the pH decreased and the titratable acidity increased. The total coliform, Enterobacteriaceae, aerobicmesophilic bacteria (AMB), yeast, and mould counts were significantly reduced at the end of fermentation. In contrast, the number of lactic acid bacteria (LAB) increased significantly until day 30 of fermentation, because of the ability of the LAB to grow at low pH. Lactobacillus species from LAB isolates and Enter obacteriaceae from AMB isolates were the most abundant microorganisms in gammaa fermentation. However, the Enterobacteriaceae and Lactobacilli species count showed decreasing and increasing trends, respectively, as the fermentation progressed. These isolates must be investigated further to identify the species and strain, so as to develop gammaa at the commercial scale.

Noise Cancellation and Detection of Heartbeat using A New Adaptive Noise Canceller Based on ALE(Adaptive Line Enhancer) in the CW Bio-radar (CW 바이오 레이더에서 ALE(Adaptive Line Enhancer) 기반의 새로운 적응형 잡음제거기를 이용한 잡음제거 및 심장박동 검출)

  • Seo, Myung-Hwan;Kim, Jae-Joong
    • Journal of Advanced Navigation Technology
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    • v.13 no.4
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    • pp.482-489
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    • 2009
  • This paper proposes a CW(Continuous-Wave) bio-radar applying a new adaptive noise canceller based on ALE(Adaptive Line Enhancer) which can remove the Gaussian noise and system noise. Recently the research works on this CW bio-radar which can be used to detect heartbeat and respiration are advanced by the university and research facility. Although the researches describe CW bio-radar not only is vulnerable for the Gaussian noise but also has a disadvantage of decreasing the heart-rate accuracy due to the noise, the researches do not demonstrate the effective method for removing the noise component in a baseband signal. In this paper, a CW bio-radar applying the new adaptive noise canceller based on ALE which can remove the noise component is proposed. This paper compares and analyzes the performance for increasing the heart-rate accuracy according to removing the Gaussian noise and system noise in the baseband signal through the quadrature receiver which can alleviate the demodulation sensitivity to target position.

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A Basic Study on Utilization of Radar Target Enhancer (능동형 레이더 리프렉터의 이용에 관한 조사연구)

  • Jeong Jung-Sik;Park Sung-Hyeon;Kim Chul-Seong;Ahn Young-sup;Kim Woo-Suk
    • Proceedings of KOSOMES biannual meeting
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    • 2004.05b
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    • pp.35-38
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    • 2004
  • IMO sub-committee on safety of navigation has worked a draft recommendation for RTE in order to amy a radar target enhancer(RTE) on small ships. According to the draft recommendation for RTE, we need a preliminary research for RTE development and its applicability. In this paper, we investigate the results rf field tests in other countries and analyze technical and critical problems in RTE The results of our analysis will provide helpful comments in IMO subcommmitte as well as in a domestic development of RTE.

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Improved Expression of Muscle-derived Growth Hormone Releasing Hormone from ${\alpha}$-Skeletal-muscle Actin Enhancer/Cytomegalovirus Hybrid Enhancer/Promoter

  • Gong, Xia;Meng, Qingyong;Jin, Weiwu;Li, Ning
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.5
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    • pp.784-788
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    • 2007
  • Growth hormone-releasing hormone (GHRH), a hypothalamic neuropeptide can stimulate the growth hormone secretion from the anterior pituitary. In this study, a porcine GHRH expression plasmid pHC-GHRH was used to enhance growth performance through ectopic expressions in muscle tissues of rats. Rats injected with the plasmid of pHC-GHRH and pCMV-GHRH exhibited cumulative weight gains 6.4% and 1% greater than controls. During a 5-day period, significant weight gain differences were observed as follows compared with that of control: during 5-10 days post-injection (DPI) period, the group pHC-GHRH on average 14.5% heavier than controls, $40.73{\pm}0.88$ g vs. $35.57{\pm}1.23$ g (p = 0.0023); during 10-15 DPI period, the group pHC-GHRH on average 13.6% heavier than controls, $37.49{\pm}2.85$ g vs. $33.00{\pm}1.56$ g (p = 0.0146); during 15-20 DPI period, the group pHC-GHRH on average 17.8% heavier than controls, $25.64{\pm}1.39$ g vs. $21.77{\pm}1.27$ g (p<0.05). In addition, plasmids-treated rats maintained higher serum IGF-I than controls. Significant differences of IGF-I were observed on 13 DPI and on 40 DPI in pHC-GHRH group compared with that of controls. This was accomplished through the use of an improved expression cassette that included the cytomegalovirus (CMV) immediate early enhancer/promoter in combination with a 1.5-kilobase portion of porcine ${\alpha}$-skeletal muscle actin promoter.

Enhancer Function of MicroRNA-3681 Derived from Long Terminal Repeats Represses the Activity of Variable Number Tandem Repeats in the 3' UTR of SHISA7

  • Lee, Hee-Eun;Park, Sang-Je;Huh, Jae-Won;Imai, Hiroo;Kim, Heui-Soo
    • Molecules and Cells
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    • v.43 no.7
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    • pp.607-618
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    • 2020
  • microRNAs (miRNAs) are non-coding RNA molecules involved in the regulation of gene expression. miRNAs inhibit gene expression by binding to the 3' untranslated region (UTR) of their target gene. miRNAs can originate from transposable elements (TEs), which comprise approximately half of the eukaryotic genome and one type of TE, called the long terminal repeat (LTR) is found in class of retrotransposons. Amongst the miRNAs derived from LTR, hsa-miR-3681 was chosen and analyzed using bioinformatics tools and experimental analysis. Studies on hsa-miR-3681 have been scarce and this study provides the relative expression analysis of hsa-miR-3681-5p from humans, chimpanzees, crab-eating monkeys, and mice. Luciferase assay for hsa-miR-3681-5p and its target gene SHISA7 supports our hypothesis that the number of miRNA binding sites affects target gene expression. Especially, the variable number tandem repeat (VNTR) and hsa-miR-3681-5p share the binding sites in the 3' UTR of SHISA7, which leads the enhancer function of hsamiR-3681-5p to inhibit the activity of VNTR. In conclusion, hsa-miR-3681-5p acts as a super-enhancer and the enhancer function of hsa-miR-3681-5p acts as a repressor of VNTR activity in the 3' UTR of SHISA7.

Development of Transdermal Delivery Systems Containing Clenbuterol (클렌부테롤 경피흡수제제의 개발)

  • Choi, Han-Gon;Quan, Qi-Zhe;Jung, Si-Young;Rhee, Jong-Dal;Yong, Chul-Soon
    • Journal of Pharmaceutical Investigation
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    • v.30 no.4
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    • pp.247-252
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    • 2000
  • The advantages of transdermal administration are avoiding hepatic first pass effect, minimizing inter- and intra-patient variation, maintaining steady-state plasma level to provide long-term therapy from a single dose, and allowing a rapid termination of drug input. Clenbuterol, a selective ${\beta}_2-adrenergic$ receptor stimulant, has been introduced as a potent bronchodilator for patients with bronchial asthma, chronic obstructive bronchial disease. For the development of transdermal systems containing clenbuterol, two limiting factors - long lag time and low flux - must be overcome. In this study, we attempted to select optimal formulation for preparation of clenbuterol patch using hairless mouse skin and flow-through diffusion cell. The flux of clenbuterol increased as the percent of clenbuterol dose dependently in the concentration range of 5-15%. Based on this result, we fixed the concentration of clenbuterol as 15%. The effect of various penetration enhancers on percutaneous absorption of clenbuterol through hairless mouse skin was investigated. Labrafil was the most effective enhancer, which increased the permeability of clenbuterol approximately 4-fold compared with the control without penetration enhancer. Optimal enhancer concentration was 3%. The effect of various adhesives on penetration of clenbuterol was also investigated. Among the adhesives studied, MA-31 was the most effective adhesive. Furthermore, the clenbuterol patch composed of 15% clenbuterol, 3% Labrafil and 82% MA-31, which gave most excellent penetration of drug in in vitro penetration study, maintained therapeutic plasma levels in in vivo study using S.D. rats. These studies demonstrated a good feasibility of clenbuterol administration through the intact skin using a transdermal patch, and show a possibility of the development of clenbuterol patches.

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Dragon fruit (Hylocereus undatus) peel pellet as a rumen enhancer in Holstein crossbred bulls

  • Matra, Maharach;Totakul, Pajaree;Viennasay, Bounnaxay;Phesatcha, Burarat;Wanapat, Metha
    • Animal Bioscience
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    • v.34 no.4
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    • pp.594-602
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    • 2021
  • Objective: An experiment was conducted to assess the effect of dragon fruit peel pellet (DFPP) as a rumen enhancer of dry matter consumption, nutrient digestibilities, ruminal ecology, microbial protein synthesis and rumimal methane production in Holstein crossbred bulls. Methods: Four animals, with an average live-weight of 200±20 kg were randomly assigned in a 4×4 Latin square design to investigate the influence of DFPP supplementation. There were four different dietary treatments: without DFPP, and with 200, 300, and 400 g/h/d, respectively. Results: Results revealed that dry matter consumption of total intake, rice straw and concentrate were not significantly different among treatments (p>0.05). It was also found that ruminal pH was not different among treatments (p>0.05), whilst protozoal group was reduced when DFPP increased (p<0.01). Blood urea nitrogen and NH3-N concentrations were increased at 400 g of DFPP supplementation (p<0.01). Additionally, volatile fatty acid production of propionate was significantly enhanced by the DFPP supplementation (p<0.05), while production of methane was consequently decreased (p<0.05). Furthermore, microbial protein synthesis and urinary purine derivatives were remarkably increased especially at 400 g of DFPP supplementation (p<0.05). Conclusion: Plant secondary compounds or phytonutrients (PTN) containing saponins (SP) and condensed tannins (CT) have been reported to influence rumen fermentation. DFPP contains both CT and SP as a PTN. The addition of 400 g of DFPP resulted in improved rumen fermentation end-products especially propionate (C3) and microbial protein synthesis. Therefore, DFPP is a promising rumen enhancer and indicated a significant potential of DFPP as feedstuff for ruminant feed to mitigate rumen methane production.

Absorption Enhancer and Polymer (Vitamin E TPGS and PVP K29) by Solid Dispersion Improve Dissolution and Bioavailability of Eprosartan Mesylate

  • Ahn, Jae-Soon;Kim, Kang-Min;Ko, Chan-Young;Kang, Jae-Seon
    • Bulletin of the Korean Chemical Society
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    • v.32 no.5
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    • pp.1587-1592
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    • 2011
  • The aim of the present study was to improve the solubility and bioavailability of a poorly water-soluble drug in human body, using a solid dispersion technique (hot melt extrusion). The solid dispersion was prepared by cooling the hot melt of the drug in the carrier (Vitamin E TPGS and PVP). The dissolution rate of formulation 1 from a novel formulation prepared by solid dispersion technique was equal to release of formulation 6 (40% of eprosartan mesylate is in contrast to teveten$^{(R)}$) within 60 min (Table 1). The oral bioavailability of new eprosartan mesylate tablet having vitamin E TPGS and PVP K29 was tested on rats and dogs. Of the absorption enhancer and polymer tested, vitamin E TPGS and PVP K29, resulted in the greatest increases of AUC in animals (about 2.5-fold increase in rat and dog). When eprosartan mesylate was mixed with the absorption enhancer and polymer in a ratio of 2.94:2:1, vitamin E TPGS and PVP K29 improved eprosartan mesylate bioavailability significantly compared with the conventional immediate release (IR) tablet Teveten$^{(R)}$ (formulation 7). These results show that solid dispersion using vitamin E TPGS and PVP K29 is a promising approach for developing eprosartan mesylate drug products.

Application of Adaptive Line Enhancer for Detection of Ball Bearing Defects (볼 베어링의 결함검출을 위한 Adaptive Line Enhancer의 적용)

  • Kim Young Tae;Choi Man Yong;Kim Ki Bok;Park Hae Won;Park Jeong Hak;Kim Jong Ock;Lyou Jun
    • Transactions of the Korean Society of Machine Tool Engineers
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    • v.14 no.2
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    • pp.96-103
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    • 2005
  • The early detection of the bearing defects in rotating machinery is very important since the critical failure of bearing causes a machinery shutdown. However it is not easy to detect the vibration signal caused by the initial defects of bearing because of the high level of random noise. A signal processing technique, called the adaptive line enhancer(ALE) as one of adaptive filter, is used in this study. This technique is to eliminate random noise with little a prior knowledge of the noise and signal characteristics. Also we propose the optimal methods fir selecting the three main ALE parameters such as correlation length filter order and adaptation constant. Vibration signals f3r three abnormal bearings, including inner and outer raceways and ball defects, were acquired by Anderon(angular derivative of radius on) meter. The experimental results showed that ALE is very useful f3r detecting the bearing defective signals masked by random noise.