• Title/Summary/Keyword: double sequence

Search Result 307, Processing Time 0.036 seconds

Reevaluation of Enumeration of Bacillus cereus Grown on Mannitol-Egg York-Polymyxin B Agar (Mannitol-Egg York-Polymyxin B 선택 배지에서 Bacillus cereus 계수 방법의 재평가)

  • Yun, Suk-Hyun;Kim, Yong-Sang;Jeong, Do-Yeon;Hahn, Kum-Su;Uhm, Tai-Boong
    • Korean Journal of Microbiology
    • /
    • v.45 no.2
    • /
    • pp.208-214
    • /
    • 2009
  • To avoid ambiguity in counting the number of colony, about 1,500 of colonies grown on B. cereus selective agar plates were grouped into 12 types by morphological difference and then identified by biochemical and 16S rDNA nucleotide sequence. Among them, seven colony types with 11 to 15 mm diameters of halo were identified as B. cereus or B. cereus subsp. cytotoxis. Five mm sized colonies with no halo, which have not been considered as B. cereus according to the manufacturer's manual, were identified as B. cereus. A colony type with double halos of only 6 mm in diameter was also B. cereus. Other three types were proven to be Enterococcus sp., Brevibacillus sp., and B. subtilis, respectively. PCR results showed that only 9 types that are identified as B. cereus strains harbor at least one of B. cereus toxin genes.

Isolation and Characterization of Reovirus in Korea (한국에 분포하는 레오바이러스의 분리 및 동정)

  • Song, Ki-Joon;Kang, Byung-Chul;Lee, Young-Eun;Baek, Luck-Ju;Lee, Yong-Ju;Song, Jin-Won
    • The Journal of Korean Society of Virology
    • /
    • v.29 no.2
    • /
    • pp.65-74
    • /
    • 1999
  • Reovirus was found to inhabit both the respiratory and the enteric tract of human and animals. The genome of reovirus comprises 10 segments of double-stranded RNA, total size 24 kbp. Nine strains of reovirus were isolated from human and field mice in Korea. Aseptically collected sera from human and lung tissues from field mice were used for virus isolation. For serotype determination, hemagglutination inhibition test was used, and three strains were confirmed to type 2 and six strains to type 3. To determine the genomic diversity and molecular phylogeny of reoviruses isolated in Korea, part of S4 genomic segment of reovirus was enzymatically amplified and directly sequenced. In nucleotide level, Apo98-35 strain showed 15.4%, 19.3%, and 14.4% differences compared to type 1 (T1L, Lang), type 2 (T2J), and type 3 reference strains, respectively. In amino acid level, Apo98-35 strain showed 10.5%, 13.7%, and 9.5% differences compared to type 1, type 2, and type 3 reference strains, respectively. Using the maximum parsimony method based on 285 bp spaning region of the S4 genomic segment, phylogenetic analysis indicated that Apo98-35 from Korea formed different phylogenetic branch. Our data obtained by sequence and phylogenetic analyses of reoviruses are consistent with the distinct geographically dependent evolution of reoviruses in Korea.

  • PDF

Evaluation of Flexible Complementary Inverters Based on Pentacene and IGZO Thin Film Transistors

  • Kim, D.I.;Hwang, B.U.;Jeon, H.S.;Bae, B.S.;Lee, H.J.;Lee, N.E.
    • Proceedings of the Korean Vacuum Society Conference
    • /
    • 2012.02a
    • /
    • pp.154-154
    • /
    • 2012
  • Flexible complementary inverters based on thin-film transistors (TFTs) are important because they have low power consumption and high voltage gain compared to single type circuits. We have manufactured flexible complementary inverters using pentacene and amorphous indium gallium zinc oxide (IGZO) for the p-channel and n-channel, respectively. The circuits were fabricated on polyimide (PI) substrate. Firstly, a thin poly-4-vinyl phenol (PVP) layer was spin coated on PI substrate to make a smooth surface with rms surface roughness of 0.3 nm, which was required to grow high quality IGZO layers. Then, Ni gate electrode was deposited on the PVP layer by e-beam evaporator. 400-nm-thick PVP and 20-nm-thick ALD Al2O3 dielectric was deposited in sequence as a double gate dielectric layer for high flexibility and low leakage current. Then, IGZO and pentacene semiconductor layers were deposited by rf sputter and thermal evaporator, respectively, using shadow masks. Finally, Al and Au source/drain electrodes of 70 nm were respectively deposited on each semiconductor layer using shadow masks by thermal evaporator. The characteristics of TFTs and inverters were evaluated at different bending radii. The applied strain led to change in voltage transfer characteristics of complementary inverters as well as source-drain saturation current, field effect mobility and threshold voltage of TFTs. The switching threshold voltage of fabricated inverters was decreased with increasing bending radius, which is related to change in parameters of TFTs. Throughout the bending experiments, relationship between circuit performance and TFT characteristics under mechanical deformation could be elucidated.

  • PDF

Hybrid complementary circuits based on organic/inorganic flexible thin film transistors with PVP/Al2O3 gate dielectrics

  • Kim, D.I.;Seol, Y.G.;Lee, N.E.;Woo, C.H.;Ahn, C.H.;Ch, H.K.
    • Proceedings of the Korean Vacuum Society Conference
    • /
    • 2011.02a
    • /
    • pp.479-479
    • /
    • 2011
  • Flexible inverters based on complementary thin-film transistor (CTFTs) are important because they have low power consumption and other advantages over single type TFT inverters. In addition, integrated CTFTs in flexible electronic circuits on low-cost, large area and mechanically flexible substrates have potentials in various applications such as radio-frequency identification tags (RFIDs), sensors, and backplanes for flexible displays. In this work, we introduce flexible complementary inverters using pentacene and amorphous indium gallium zinc oxide (IGZO) for the p-channel and n-channel, respectively. The CTFTs were fabricated on polyimide (PI) substrate. Firstly, a thin poly-4-vinyl phenol (PVP) layer was spin coated on PI substrate to make a smooth surface with rms surface roughness of 0.3 nm, which was required to grow high quality IGZO layers. Then, Ni gate electrode was deposited on the PVP layer by e-beam evaporator. 400-nm-thick PVP and 20-nm-thick ALD Al2O3 dielectric was deposited in sequence as a double gate dielectric layer for high flexibility and low leakage current. Then, IGZO and pentacene semiconductor layers were deposited by rf sputter and thermal evaporator, respectively, using shadow masks. Finally, Al and Au source/drain electrodes of 70 nm were respectively deposited on each semiconductor layer using shadow masks by thermal evaporator. Basic electrical characteristics of individual transistors and the whole CTFTs were measured by a semiconductor parameter analyzer (HP4145B, Agilent Technologies) at room temperature in the dark. Performance of those devices then was measured under static and dynamic mechanical deformation. Effects of cyclic bending were also examined. The voltage transfer characteristics (Vout- Vin) and voltage gain (-dVout/dVin) of flexible inverter circuit were analyzed and the effects of mechanical bending will be discussed in detail.

  • PDF

A Novel Integrative Expression Vector for Sulfolobus Species

  • Choi, Kyoung-Hwa;Hwang, Sungmin;Yoon, Naeun;Cha, Jaeho
    • Journal of Microbiology and Biotechnology
    • /
    • v.24 no.11
    • /
    • pp.1503-1509
    • /
    • 2014
  • With the purpose of facilitating the process of stable strain generation, a shuttle vector for integration of genes via a double recombination event into two ectopic sites on the Sulfolobus acidocaldarius chromosome was constructed. The novel chromosomal integration and expression vector pINEX contains a pyrE gene from S. solfataricus P2 ($pyrE_{sso}$) as an auxotrophic selection marker, a multiple cloning site with histidine tag, the internal sequences of malE and malG for homologous recombination, and the entire region of pGEM-T vector, except for the multiple cloning region, for propagation in E. coli. For stable expression of the target gene, an ${\alpha}$-glucosidase-producing strain of S. acidocaldarius was generated employing this vector. The malA gene (saci_1160) encoding an ${\alpha}$-glucosidase from S. acidocaldarius fused with the glutamate dehydrogenase ($gdhA_{saci}$) promoter and leader sequence was ligated to pINEX to generate pINEX_malA. Using the "pop-in" and "pop-out" method, the malA gene was inserted into the genome of MR31 and correct insertion was verified by colony PCR and sequencing. This strain was grown in YT medium without uracil and purified by His-tag affinity chromatography. The ${\alpha}$-glucosidase activity was confirmed by the hydrolysis of $pNP{\alpha}G$. The pINEX vector should be applicable in delineating gene functions in this organism.

Effects of Hold-Relax and Active Range of Motion on Thoracic Spine Mobility

  • Kondratek, Melodie;Pepin, Marie-Eve;Krauss, John;Preston, Danelle
    • Journal of International Academy of Physical Therapy Research
    • /
    • v.3 no.2
    • /
    • pp.413-421
    • /
    • 2012
  • Few studies address the use of manual muscle stretching to improve spinal active range of motion(AROM). There is evidence that' Hold-Relax'(HR) is effective for increasing ROM in the extremities, which leads the researchers to anticipate similar benefits in the spine. The purpose of this study is to investigate the effects of HR(trunk flexors) and active thoracic flexion and extension on thoracic mobility, specifically flexion and extension in healthy individuals. A convenience sample of 30 physical therapy students(22-38 years) were randomly assigned to intervention sequence 'A-B' or 'B-A', with at least 7 days between interventions. Intervention' A' consisted of HR of the ventral trunk musculature while 'B' consisted of thoracic flexion-extension AROM. Thoracic flexion and extension AROM were measured before and after each intervention using the double inclinometer method. Paired t-tests were used to compare AROM pre and post-intervention for both groups, and to test for carry-over and learning effects. There was a statistically significant increase(mean=$3^{\circ}$ ; p=0.006) in thoracic extension following HR of the trunk flexors. There were no significant changes in thoracic flexion following HR, or in flexion or extension following the AROM intervention. No carryover or learning effects were identified. HR may be an effective tool for improving AROM in the thoracic spine in pain free individuals. Further investigation is warranted with symptomatic populations and to define the minimal clinical difference(MCD) for thoracic spine mobility.

Design of Seoul Park in Paris (파리서울공원 설계)

  • 오웅성
    • Journal of the Korean Institute of Landscape Architecture
    • /
    • v.29 no.1
    • /
    • pp.41-50
    • /
    • 2001
  • The seoul Metropolitan Government has announced a program of the realization of a Korean garden named 'Seoul Park' in Paris 'Jardin d'Acclimatation' in June, 2000. The program for 'Seoul Park' in Paris has double objectives which aims celebrating the 10th anniversary of the establishment of sisterhood relationship between Seoul and paris and to promote the mutual cooperation and the amity between the two metropolitan cities. The purpose of this study is focusing on the issues on the setting procedure of characteristics of the 'Seoul Park', type of the Park, and design realization of expression of Korean identity, and the cultural consolidation between parks in Korean and French. The Seoul Park will be constructed on the shore of a lake of the Jardin d'Acclimatation, and the size of the area is 4,675㎡. In July, a design competition for the preparation of a schematic plan of the Seoul Park was held in Seoul. In this competition, the author won with a scheme which proposed a Korean Garden as expression of "between" two cultures which is fitted into the French environment. Although, the Seoul Park in Paris is a small Korean garden, its significance would be emphasized in terms of that it represents the adaptation of a Korean culture to the French territory. Throughout the winning entry, we could recognized hat the author defines Korean garden as 'time device', and 'Seoul Park' as 'Situation' which is the consolidation of the cultures between korea and France. And also the author pursued Korean garden as a net type of 'sequence of the event'. In this paper, we have discussed the concept and the schematic plan of the winning entry. focusing on following issues: Definition of the garden; Form of the garden; Expression of Korean garden; Representation of the reconciliation between two environments. Since many parts of the garden are under designing, and the discussion on the resetting of the existing trees in the garden is in progress, more specific investigation will be done in the next thesis.

  • PDF

Circulating Current Control in MMC-HVDC Considering Switching Device Current Capacity under Unbalanced Voltage Conditions (전압 불평형 조건에서 스위칭 소자의 전류용량을 고려한 MMC-HVDC 순환전류 제어기법)

  • Kim, Chun-Sung;Jung, Seung-Hwan;Hwang, Jung-Goo;Park, Seong-Mi;Park, Sung-Jun
    • Journal of the Korean Institute of Illuminating and Electrical Installation Engineers
    • /
    • v.30 no.1
    • /
    • pp.55-65
    • /
    • 2016
  • This paper proposed a new control method which is capable of controlling circulating current considering current capacity of switching device. In the unbalanced voltage conditions, active power and reactive power have double line frequency. Thus, in order to provide active power without ripple, it is necessary to inject the negative sequence current components. However, when the negative current components is injected, it increases the total current flowing in the Arm, and in the Sub-module(SM) the current more than rated is impressed, which leads to destroy the system. Also, in impressing the circulating current reference of each arm, conventional control method impressed applicable $i_{dck}/3$ in the case of balanced voltage conditions. In the case of unbalanced conditions, as arm circulating current of three phase show difference due to the power impressed to each arm, reference of each arm is not identical. In this study, in the case of unbalanced voltage, within permitted current, the control method to decrease the ripple of active power is proposed, through circulating current control and current limitations. This control method has the advantage that calculates the maximum active power possible to generate capacity and impressed the current reference for that much. Also, in impressing circulating current reference, a new control method proposes to impress the reference from calculating active power of each phase. The proposed control method is verified through the simulation results, using the PSCAD/EMTDC.

A Design of Efficient Scan Converter for Image Compression CODEC (영상압축코덱을 위한 효율적인 스캔변환기 설계)

  • Lee, Gunjoong;Ryoo, Kwangki
    • Journal of the Korea Institute of Information and Communication Engineering
    • /
    • v.19 no.2
    • /
    • pp.386-392
    • /
    • 2015
  • Data in a image compression codec are processed with a specific regular block size. The processing order of block sized data is changed in specific function blocks and the data is packed in memory and read by a new sequence. To maintain a regular throughput rate, double buffering is normally used that interleaving two block sized memory to do concurrent read and write operations. Single buffering using only one block sized memory can be adopted to the simple data reordering, but when a complicate reordering occurs, irregular address changes prohibit from implementing adequate address generating for single buffering. This paper shows that there is a predictable and recurring regularity of changing address access orders within a finite updating counts and suggests an effective method to implement. The data reordering function using suggested idea is designed with HDL and implemented with TSMC 0.18 CMOS process library. In various scan blocks, it shows more than 40% size reduction compared with a conventional method.

Viral Effects of a dsRNA Mycovirus (PoV-ASI2792) on the Vegetative Growth of the Edible Mushroom Pleurotus ostreatus

  • Song, Ha-Yeon;Choi, Hyo-Jin;Jeong, Hansaem;Choi, Dahye;Kim, Dae-Hyuk;Kim, Jung-Mi
    • Mycobiology
    • /
    • v.44 no.4
    • /
    • pp.283-290
    • /
    • 2016
  • A double-stranded RNA (dsRNA) mycovirus was detected in malformed fruiting bodies of Pleurotus ostreatus strain ASI2792, one of bottle cultivated commercial strains of the edible oyster mushroom. The partial RNA-dependent RNA polymerase (RdRp) gene of the P. ostreatus ASI2792 mycovirus (PoV-ASI2792) was cloned, and a cDNA sequences alignment revealed that the sequence was identical to the RdRp gene of a known PoSV found in the P. ostreatus strain. To investigate the symptoms of PoV-ASI2792 infection by comparing the isogenic virus-free P. ostreatus strains with a virus-infected strain, isogenic virus-cured P. ostreatus strains were obtained by the mycelial fragmentation method for virus curing. The absence of virus was verified with gel electrophoresis after dsRNA-specific virus purification and Northern blot analysis using a partial RdRp cDNA of PoV-ASI2792. The growth rate and mycelial dry weight of virus-infected P. ostreatus strain with PoV-ASI2792 mycovirus were compared to those of three virus-free isogenic strains on 10 different media. The virus-cured strains showed distinctly higher mycelial growth rates and dry weights on all kinds of experimental culture media, with at least a 2.2-fold higher mycelial growth rate on mushroom complete media (MCM) and Hamada media, and a 2.7-fold higher mycelial dry weight on MCM and yeast-malt-glucose agar media than those of the virus-infected strain. These results suggest that the infection of PoV mycovirus has a deleterious effect on the vegetative growth of P. ostreatus.