• Journal of Korean Society of Rural Planning
• /
• v.20 no.4
• /
• pp.13-24
• /
• 2014

The pond wetlands in agricultural landscape are important natural resources that carry out the function of bio-diversity conservation. However, recently, those have been gradually embedded as their utility value were disappeared. And, the assessment methods used for pond wetlands are insufficient. Therefore, this study was conducted to examine the conservation value of pond wetlands by using the modified RAM, and present the improvement of assesment methods. The study sites, a total of 32 pond of 4 types by land use, were selected on the basis of Ramsar Convention. Through the analysis of precedent studies, the weighted 8 functions were adjusted. According to the assessment results, pond wetlands made the largest contribution to Fishery and Herpetile Habitat function. In addition, it also made large contribution to Floral Diversity, Wildlife Habitat, and Water Quality Protection function. On the other hand, it made a small contribution to Aesthetics and Recreation, Runoff Attenuation, Shoreline /Stream Bank Protection, and Flood/Storm Water Storage function due to the characteristics of small-scale pond wetlands. In the assessment of 8 functions, house type showed the worst assessment result, and mountain type showed the best assessment result. It is thought that those are due to land use type in terms of vicinity. 10 items among 52 of the modified RAM showed the same assessment results in all land use types. Accordingly, it is required to be deleted and modified the assessment method. On the other hand, it is required to add age, interference, and water use to the assessment method. It is thought that these results can be utilized for the development and modification of assessment methods focused on pond wetlands in rural area.

• Genomics & Informatics
• /
• v.21 no.3
• /
• pp.40.1-40.11
• /
• 2023

Microbial community profiling using 16S rRNA amplicon sequencing allows for taxonomic characterization of diverse microorganisms. While amplicon sequence variant (ASV) methods are increasingly favored for their fine-grained resolution of sequence variants, they often discard substantial portions of sequencing reads during quality control, particularly in datasets with large number samples. We present a streamlined pipeline that integrates FastP for read trimming, HmmUFOtu for operational taxonomic units (OTU) clustering, Vsearch for chimera checking, and Kraken2 for taxonomic assignment. To assess the pipeline's performance, we reprocessed two published stool datasets of normal Korean populations: one with 890 and the other with 1,462 independent samples. In the first dataset, HmmUFOtu retained 93.2% of over 104 million read pairs after quality trimming, discarding chimeric or unclassifiable reads, while DADA2, a commonly used ASV method, retained only 44.6% of the reads. Nonetheless, both methods yielded qualitatively similar β-diversity plots. For the second dataset, HmmUFOtu retained 89.2% of read pairs, while DADA2 retained a mere 18.4% of the reads. HmmUFOtu, being a closed-reference clustering method, facilitates merging separately processed datasets, with shared OTUs between the two datasets exhibiting a correlation coefficient of 0.92 in total abundance (log scale). While the first two dimensions of the β-diversity plot exhibited a cohesive mixture of the two datasets, the third dimension revealed the presence of a batch effect. Our comparative evaluation of ASV and OTU methods within this streamlined pipeline provides valuable insights into their performance when processing large-scale microbial 16S rRNA amplicon sequencing data. The strengths of HmmUFOtu and its potential for dataset merging are highlighted.

• Korean Journal of Environment and Ecology
• /
• v.29 no.4
• /
• pp.508-515
• /
• 2015

Post-fire restoration can affect breeding bird communities and species compositions over a long-term period by determining pot-fire succession, and a long-term monitoring is therefore required to understand its impacts on forest birds. This study aimed to document the effects of post-fire restoration methods on breeding bird communities in three areas: unburned and two burned (nonintervention and intervention with clear-cut logging and planting) stands 13 years after the stand-replacing Samcheok forest fire at Mt. Geombong in Samcheok, South Korea. According to 108 point counts during the breeding season from April to June 2013, we found that the number of individuals, observed bird species, and species diversity index in intervention stands with clear-cut logging and planting were lower than that in nonintervention and unburned control stands. Foraging and nesting guild analysis also showed a lower abundance of foliage searchers, timber drillers, primary cavity nesters and secondary cavity nesters in intervention stands than in the other stands, while no significant difference was detected between the nonintervention and unburned stands. These results imply that an interventional restoration method may deter the recovery of avian breeding communities after forest fires, and also suggest that non-interventional restoration methods may be an effective way to benefit the species diversity and density of breeding bird communities.

• Journal of the Korean School Mathematics Society
• /
• v.20 no.3
• /
• pp.211-237
• /
• 2017

Depending on the type of textbook, the word and mathematical notation expression used in high school mathematics textbooks varied and there were also some differences on the mathematical definition and the content description methods. Not only the composition of textbooks but also various expressing ways of textbooks have significant impacts on teaching and learning of teacher and student. The diversity of expression had pros and cons like both sides of a coin. There is a positive aspect that we can pursue pedagogical diversity. Simultaneously there is a negative aspect that the possibility of acting as a learning burden exists in the viewpoint of the student and the equality of evaluation may be undermined. In this study, Preferentially we focused on analyzing the actual situation rather than judging what is more appropriate about the diversity of words and notation expressions used in mathematics textbooks which is based on the current curriculum. For this purpose, we analyzed 56 kinds of mathematics textbooks based on the 2009 revised mathematics curriculum, and presented four aspects(terms expressing, notations expression, mathematical definition, content description method) with examples about differences of the various expressions used in textbooks including 'terms and notations'.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
• /
• v.17 no.3
• /
• pp.160-180
• /
• 2012

We have studied the eukaryotic plankton species diversity to compare the community structure of fresh and brackish waters in the lower reaches of the Nakdong River using metagenomic methods. We constructed 18S rDNA clone libraries of total DNAs extracted from environmental water samples collected at Mulgeum (MG100929, fresh) and Eulsukdo bridge (ES, brackish). Through the steps of colony PCR, PCR-RFLP, sequencing and similarity analysis, we discovered the diverse species composition of eukaryotic plankton. Total 338 clones (170 at MG100929 and 168 at ES) were analyzed, and then we found 74 phylotypes (49 for MG100929 and 25 for ES). From the phylogenetic analysis, we confirmed various eukaryotic plankton of broad range of taxonomic groups, including Stramenopiles, Cryptophyta, Viridiplantae, Alveolata, Rhizaria, Metazoa, and Fungi. We also found several unreported species in Korea and candidates of new taxonomic entities at levels higher than genus. Especially, the cryptic species diversity including unreported phylotypes of Pirsonia (Stramenopiles) and Perkinsea (Alveolata) suggests that the molecular monitoring method can produce new informative biological data in monitoring the changes in the Nakdong River Mouth ecosystem.

• The Journal of Korean Institute of Communications and Information Sciences
• /
• v.33 no.6C
• /
• pp.429-437
• /
• 2008

Multiple-input multiple-output (MIMO) techniques can be used for the spectral efficiency enhancement of the cellular systems, which can be categorized into spatial multiplexing (SM) and spatial diversity schemes. MIMO systems suffer a severe performance degradation due to the intercell interference from the adjacent cells as the mobile terminal moves toward the cell boundary. Therefore for the spectral efficiency enhancement, an appropriate transmission scheme for the given channel environment and reception scheme which can mitigate the intercell interference are required. In this paper, we propose an adaptive signal transmission/reception scheme for the spectral efficiency improvement of $M_R{\times}M_T$ MIMO systems, present the decision criteria for the adaptive operation of the proposed scheme, and demonstrate the performance gain. The proposed scheme performs adaptive transmission using spatial multiplexing and spatial diversity, and adaptive reception using maximal ratio combining (MRC) and intercell spatial demultiplexing (ISD) when the spatial diversity transmission is used at the transmitter. Spatial multiplexing/demultiplexing is performed at the high signal-to-interference ratio (SIR) range, and the transmit diversity in conjunction with the adaptive reception uses either conventional MRC or ISD which can mitigate the $M_R-1$ interference signals, based on the mobile location. For the performance evaluation of the proposed adaptive scheme, the probability density function (pdf) of the effective SIR for the transmission/reception methods in consideration are derived for $M_R{\times}M_T$ MIMO systems. Using the results, the average effective SIR and spectral efficiency are presented and compared with simulation results.

• Journal of Korean Society of Forest Science
• /
• v.110 no.4
• /
• pp.516-529
• /
• 2021

Coniferous forests in the Baekdudaegan protected area are gradually losing their landscape diversity and uniqueness along with their ecological stability due to changes in vegetation composition and structures caused by various disturbance factors, such as climate change, vegetation succession, and human interference. This study provides basic data for establishing a comprehensive conservation plan for coniferous forests in the Baekdudaegan protected area. We classified the vegetation unit types using the Zurich-Montpellier School of Phytosociology and two-way indicator species analysis methods and analyzed the species diversity and structural characteristics based on the vegetation information of 755 stands collected in the natural resources change survey of the Baekdudaegan mountains (2016 to 2020) by the Korea Forest Service. Therefore, the vegetation of the coniferous forests of theBaekdudaegan protected area was classified into 15 types under the vegetation unit hierarchy of two community groups, four communities, seven sub-communities, and 14 variants. Furthermore, we compared the total coverage among vegetation types, importance values, constancy classes, life-forms, and diversity indices. Additionally, the average total coverage and number of species per 100 m² of all coniferous forests were 232% and 21 species, respectively, with the species diversity and dominance indices averaging 1.907 and 0.222, respectively.

• Korean Journal of Environment and Ecology
• /
• v.35 no.3
• /
• pp.294-304
• /
• 2021

This study aims to obtain basic data for systematic restoration by analyzing the monitoring results of the Shimwon Valley Ecological Landscape Restoration Project area in Jirisan National Park. In 2017, when the restoration project was completed, 12 monitoring plots and 4 control plots were installed for vegetation monitoring, and changes in the relative dominance, species diversity index and similarity between 2017 and 2020 were analyzed. The species diversity index of the surveyed areas where trees were planted during the restoration project was 0-1.4552, and the similarity index with the control group was 0% except for one survey area at 1.32%. The very low species diversity index and similarity index in the survey areas were attributed to the loss of trees planted during the restoration project due to death, damage by wild boars, or erosion by running water. On the other hand, the species diversity index was 0.9538-2.3222 in the monitoring plot where no tree was planted, and the similarity index was analyzed to be as high as 8.33%. It is necessary to continue the long-term monitoring for the development of ecological landscape restoration methods in the national park and analysis of the succession in monitoring plots where no trees were planted.

• Asia-pacific Journal of Multimedia Services Convergent with Art, Humanities, and Sociology
• /
• v.6 no.8
• /
• pp.381-398
• /
• 2016

This study explains how Cultural-art organizations contribute to development of cultural diversity at this time of paradigme of cultural diversity. The object in this study 'Garam' which is a cultural art organization is comprised of people from multicultural families. The organization has been continued in unwanted environment. The very fact that this organization, as a group of people of multicultural background, has maintained its influence for a while indicates the possibility for the settlement of cultural diversity as a new paradigm. This research has proven that how various cultures can co-exist with korean culture through couple of methods. One is doing interviews with people who are involved in such field. And the other one is monitoring specific process or steps of how is the organization that deals with cultural and artistic subjects founded, operated and works. Accordingly, based on the operational factors and executive matters of the organization, the role of this multicultural theatre group was confirmed. This study's explication about the possibility of development of cultural diversity focuses on field activities with the recognition of limited effectiveness of institutionalized associations. Also, it analyses how realistically cultural art organization contribute to development of cultural divetsity, and what factors hinder the development.

• Animal Bioscience
• /
• v.37 no.7
• /
• pp.1168-1176
• /
• 2024

Objective: As a charismatic species, cashmere goats have rich genetic resources. In the Inner Mongolia Autonomous Region, there are three cashmere goat varieties named and approved by the state. These goats are renowned for their high cashmere production and superior cashmere quality. Therefore, it is vitally important to protect their genetic resources as they will serve as breeding material for developing new varieties in the future. Methods: Three breeds including Inner Mongolia cashmere goats (IMCG), Hanshan White cashmere goats (HS), and Ujimqin white cashmere goats (WZMQ) were studied. IMCG were of three types: Aerbas (AEBS), Erlangshan (ELS), and Alashan (ALS). Nine DNA samples were collected for each population, and they were genomically re-sequenced to obtain high-depth data. The genetic diversity parameters of each population were estimated to determine selection intensity. Principal component analysis, phylogenetic tree construction and genetic differentiation parameter estimation were performed to determine genetic relationships among populations. Results: Samples from the 45 individuals from the five goat populations were sequenced, and 30,601,671 raw single nucleotide polymorphisms (SNPs) obtained. Then, variant calling was conducted using the reference genome, and 17,214,526 SNPs were retained after quality control. Individual sequencing depth of individuals ranged from 21.13× to 46.18×, with an average of 28.5×. In the AEBS, locus polymorphism (79.28) and expected heterozygosity (0.2554) proportions were the lowest, and the homologous consistency ratio (0.1021) and average inbreeding coefficient (0.1348) were the highest, indicating that this population had strong selection intensity. Conversely, ALS and WZMQ selection intensity was relatively low. Genetic distance between HS and the other four populations was relatively high, and genetic exchange existed among the other four populations. Conclusion: The Inner Mongolia cashmere goat (AEBS type) population has a relatively high selection intensity and a low genetic diversity. The IMCG (ALS type) and WZMQ populations had relatively low selection intensity and high genetic diversity. The genetic distance between HS and the other four populations was relatively high, with a moderate degree of differentiation. Overall, these genetic variations provide a solid foundation for resource identification of Inner Mongolia Autonomous Region cashmere goats in the future.