• Title/Summary/Keyword: dimensionality

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Design of Gas Identification System with Hierarchical Rule base using Genetic Algorithms and Rough Sets (유전 알고리즘과 러프 집합을 이용한 계층적 식별 규칙을 갖는 가스 식별 시스템의 설계)

  • Bang, Yonug-Keun;Byun, Hyung-Gi;Lee, Chul-Heui
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.61 no.8
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    • pp.1164-1171
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    • 2012
  • Recently, machine olfactory systems as an artificial substitute of the human olfactory system are being studied actively because they can scent dangerous gases and identify the type of gases in contamination areas instead of the human. In this paper, we present an effective design method for the gas identification system. Even though dimensionality reduction is the very important part, in pattern analysis, We handled effectively the dimensionality reduction by grouping the sensors of which the measured patterns are similar each other, where genetic algorithms were used for combination optimization. To identify the gas type, we constructed the hierarchical rule base with two frames by using rough set theory. The first frame is to accept measurement characteristics of each sensor and the other one is to reflect the identification patterns of each group. Thus, the proposed methods was able to accomplish effectively dimensionality reduction as well as accurate gas identification. In simulation, we demonstrated the effectiveness of the proposed methods by identifying five types of gases.

Main SNP Identification of Hanwoo Carcass Weight with Multifactor Dimensionality Reduction(MDR) Method (MULTIFACTOR DIMENSIONALITY REDUCTION(MDR)을 이용한 한우 도체중에서의 주요 SNP 규명)

  • Lee, Jea-Young;Kim, Dong-Chul
    • The Korean Journal of Applied Statistics
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    • v.21 no.1
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    • pp.53-63
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    • 2008
  • It is commonly believed that disease of human or economic traits of livestock are caused not by single gene acting alone, but by multiple genes interacting with one an-other. This issue is difficult due to the limitations of parametric statistical method like as logistic regression for detection of gene effects that are dependent solely on interactions with other genes and with environmental exposures. Multifactor dimensionality reduction (MDR) nonparametric statistical method, to improve the identification of single nucleotide polymorphism (SNP) associated with the Hanwoo(Korean cattle) carcass cold weight, is applied and compared with ANOVA results.

The Kernel Trick for Content-Based Media Retrieval in Online Social Networks

  • Cha, Guang-Ho
    • Journal of Information Processing Systems
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    • v.17 no.5
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    • pp.1020-1033
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    • 2021
  • Nowadays, online or mobile social network services (SNS) are very popular and widely spread in our society and daily lives to instantly share, disseminate, and search information. In particular, SNS such as YouTube, Flickr, Facebook, and Amazon allow users to upload billions of images or videos and also provide a number of multimedia information to users. Information retrieval in multimedia-rich SNS is very useful but challenging task. Content-based media retrieval (CBMR) is the process of obtaining the relevant image or video objects for a given query from a collection of information sources. However, CBMR suffers from the dimensionality curse due to inherent high dimensionality features of media data. This paper investigates the effectiveness of the kernel trick in CBMR, specifically, the kernel principal component analysis (KPCA) for dimensionality reduction. KPCA is a nonlinear extension of linear principal component analysis (LPCA) to discovering nonlinear embeddings using the kernel trick. The fundamental idea of KPCA is mapping the input data into a highdimensional feature space through a nonlinear kernel function and then computing the principal components on that mapped space. This paper investigates the potential of KPCA in CBMR for feature extraction or dimensionality reduction. Using the Gaussian kernel in our experiments, we compute the principal components of an image dataset in the transformed space and then we use them as new feature dimensions for the image dataset. Moreover, KPCA can be applied to other many domains including CBMR, where LPCA has been used to extract features and where the nonlinear extension would be effective. Our results from extensive experiments demonstrate that the potential of KPCA is very encouraging compared with LPCA in CBMR.

Major SNP Marker Identification with MDR and CART Application

  • Lee, Jea-Young;Choi, Yu-Mi
    • Communications for Statistical Applications and Methods
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    • v.15 no.2
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    • pp.265-271
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    • 2008
  • It is commonly believed that diseases of human or economic traits of livestock are caused not by single genes acting alone, but multiple genes interacting with one another. This issue is difficult due to the limitations of parametric-statistic methods of gene effects. So we introduce multifactor-dimensionality reduction(MDR) as a methods for reducing the dimensionality of multilocus information. The MDR method is nonparametric (i. e., no hypothesis about the value of a statistical parameter is made), model free (i. e., it assumes no particular inheritance model) and is directly applicable to case-control studies. Application of the MDR method revealed the best model with an interaction effect between the SNPs, SNP1 and SNP3, while only one main effect of SNP1 was statistically significant for LMA (p < 0.01) under a general linear mixed model.

A study on interaction effect among risk factors of delirium using multifactor dimensionality reduction method

  • Lee, Jong-Hyeong;Lee, Yong-Won;Lee, Yoon-Seok;Lee, Jea-Young
    • Journal of the Korean Data and Information Science Society
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    • v.22 no.6
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    • pp.1257-1264
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    • 2011
  • Delirium is a neuropsychiatric disorder accompanying symptoms of hallucination, drowsiness, and tremors. It has high occurrence rates among elders, heart disease patients, and burn patients. It is a medical emergency associated with increased morbidity and mortality rates. That s why early detection and prevention of delirium ar significantly important. And This mental illness like delirium occurred by complex interaction between risk factors. In this paper, we identify risk factors and interactions between these factors for delirium using multi-factor dimensionality reduction (MDR) method.

EFMDR-Fast: An Application of Empirical Fuzzy Multifactor Dimensionality Reduction for Fast Execution

  • Leem, Sangseob;Park, Taesung
    • Genomics & Informatics
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    • v.16 no.4
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    • pp.37.1-37.3
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    • 2018
  • Gene-gene interaction is a key factor for explaining missing heritability. Many methods have been proposed to identify gene-gene interactions. Multifactor dimensionality reduction (MDR) is a well-known method for the detection of gene-gene interactions by reduction from genotypes of single-nucleotide polymorphism combinations to a binary variable with a value of high risk or low risk. This method has been widely expanded to own a specific objective. Among those expansions, fuzzy-MDR uses the fuzzy set theory for the membership of high risk or low risk and increases the detection rates of gene-gene interactions. Fuzzy-MDR is expanded by a maximum likelihood estimator as a new membership function in empirical fuzzy MDR (EFMDR). However, EFMDR is relatively slow, because it is implemented by R script language. Therefore, in this study, we implemented EFMDR using RCPP ($c^{{+}{+}}$ package) for faster executions. Our implementation for faster EFMDR, called EMMDR-Fast, is about 800 times faster than EFMDR written by R script only.

A Refinement on DETECT for Polytomous Test Data

  • Kim, Hae-Rim
    • Communications for Statistical Applications and Methods
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    • v.13 no.3
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    • pp.467-477
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    • 2006
  • A multidimensionality detecting procedure DETECT, based on conditional covariances between items, is extended and refined to deal with polytomous item data as well as binary one. A large body of simulation study shows extraordinary performance of DETECT in both enumerating degrees of multidimensionality in a test and discovering dimensionally distinctive item clusters. Real data study also provides very meaningful results, making DETECT a strong dimensionality assessment tool for the test data analysis.

Asymptotic Test for Dimensionality in Probabilistic Principal Component Analysis with Missing Values

  • Park, Chong-sun
    • Communications for Statistical Applications and Methods
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    • v.11 no.1
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    • pp.49-58
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    • 2004
  • In this talk we proposed an asymptotic test for dimensionality in the latent variable model for probabilistic principal component analysis with missing values at random. Proposed algorithm is a sequential likelihood ratio test for an appropriate Normal latent variable model for the principal component analysis. Modified EM-algorithm is used to find MLE for the model parameters. Results from simulations and real data sets give us promising evidences that the proposed method is useful in finding necessary number of components in the principal component analysis with missing values at random.

Linear programming技法에 있어서 Basic Matrix의 Bartels-Golub Decomposition 및 그 응용

  • 문영현
    • 전기의세계
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    • v.32 no.11
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    • pp.664-669
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    • 1983
  • 대규모 system을 취급하는 공학분야에 있어서 Matrix의 demension이 커짐에 따라 전산부담을 줄이기 위한 소요기억용량 절감 및 계산시간의 단축이 주된 관심사 중의 하나가 되어 왔다. LP(Linear Programming)기법 역시 대규모 선형 system에 적용될 경우 Basic Matrix 에 대한 dimensionality 문제를 포함하고 있으며 이에 대한 효과적인 해결방법으로 Bartels-Golub Decomposition 방법이 연구되어 있다. 이 방법은 Chan과 Yip등이 LSGA(Load Shedding and Generator Rescheduling) 문제에의 적용을 시도한 바 있으며, 일반적인 선형최적화 문제뿐만 아니라, dimensionality가 큰 Matrix의 Inverse 계산을 요하는 문제에 널리 적용될 수 있으므로 그 개요를 소개하고자 한다.

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Gene-gene interaction of CCND1, ESR1 and CDK7 on the risk of breast cancer detected by multifactor dimensionality reduction and logistic regression (유방암과 CCND1, ESR1, CDK7 유전자 다형성의 상호작용; 로지스틱 회귀분석과 multifactor dimensionality reduction(MDR)의 분석 비교)

  • Choe Ji-Yeop;Ritchie Marylyn D.;Motsinger Alison A.;Lee Gyeong-Mu;No Dong-Yeong;Yu Geun-Yeong;Moore Jason H.;Gang Dae-Hui
    • 대한예방의학회:학술대회논문집
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    • 2004.10a
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    • pp.40.1-40.1
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    • 2004
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