• 제목/요약/키워드: delineated

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신경핵사이 눈근육마비환자에서 자기공명영상에서의 내측세로다발: 증례 보고 (Medial Longitudinal Fasciculus on MRI in a Patient with Internuclear Ophthalmoparesis: A Case Report)

  • 김성민;김호균;이희중
    • Investigative Magnetic Resonance Imaging
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    • 제18권2호
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    • pp.167-170
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    • 2014
  • 내측세로다발은 조화로운 눈운동의 핵심적인 역할을 하는 유수 합성로이며 수도관주위회색질의 배쪽의 중간선 근처에 놓여있다. 내측세로다발의 병변은 신경핵사이 눈근육마비로 불리는 동측의 내전 결손과 반대측 외전 안진을 야기한다. 중뇌와 교뇌에서 인접한 백질과 섞여있는 신경로는 전산화단층촬영술과 자기공명영상과 같은 뇌영상에서 구별하기 어렵다. 지금까지 우리가 알기로는 내측세로다발은 실제 자기공명영상에서 구체적으로 묘사되지 않았다. 우리는 염증성 탈수초성 질환에서 자기공명영상에 내측세로다발의 전체 연결 과정을 보이는 증례를 보고한다.

단백질의 동적특성해석을 위한 전산해석기법 연구 (Computational Methodology for Biodynamics of Proteins)

  • 안정희;장효선;엄길호;나성수
    • 한국소음진동공학회:학술대회논문집
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    • 한국소음진동공학회 2008년도 춘계학술대회논문집
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    • pp.476-479
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    • 2008
  • Understanding the dynamics of proteins is essential to gain insight into biological functions of proteins. The protein dynamics is delineated by conformational fluctuation (i.e. thermal vibration), and thus, thermal vibration of proteins has to be understood. In this paper, a simple mechanical model was considered for understanding protein's dynamics. Specifically, a mechanical vibration model was developed for understanding the large protein dynamics related to biological functions. The mechanical model for large proteins was constructed based on simple elastic model (i.e. Tirion's elastic model) and model reduction methods (dynamic model condensation). The large protein structure was described by minimal degrees of freedom on the basis of model reduction method that allows one to transform the refined structure into the coarse-grained structure. In this model, it is shown that a simple reduced model is able to reproduce the thermal fluctuation behavior of proteins qualitatively comparable to original molecular model. Moreover, the protein's dynamic behavior such as collective dynamics is well depicted by a simple reduced mechanical model. This sheds light on that the model reduction may provide the information about large protein dynamics, and consequently, the biological functions of large proteins.

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Milling tool wear forecast based on the partial least-squares regression analysis

  • Xu, Chuangwen;Chen, Hualing
    • Structural Engineering and Mechanics
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    • 제31권1호
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    • pp.57-74
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    • 2009
  • Power signals resulting from spindle and feed motor, present a rich content of physical information, the appropriate analysis of which can lead to the clear identification of the nature of the tool wear. The partial least-squares regression (PLSR) method has been established as the tool wear analysis method for this purpose. Firstly, the results of the application of widely used techniques are given and their limitations of prior methods are delineated. Secondly, the application of PLSR is proposed. The singular value theory is used to noise reduction. According to grey relational degree analysis, sample variable is filtered as part sample variable and all sample variables as independent variables for modelling, and the tool wear is taken as dependent variable, thus PLSR model is built up through adapting to several experimental data of tool wear in different milling process. Finally, the prediction value of tool wear is compare with actual value, in order to test whether the model of the tool wear can adopt to new measuring data on the independent variable. In the new different cutting process, milling tool wear was predicted by the methods of PLSR and MLR (Multivariate Linear Regression) as well as BPNN (BP Neural Network) at the same time. Experimental results show that the methods can meet the needs of the engineering and PLSR is more suitable for monitoring tool wear.

원격탐사를 이용한 한반도 주변해역의 해수면/해수온의 시·공간변동 특성 연구 (Temporal and Spatial Variations of SL/SST in the Korean Peninsula by Remote Sensing)

  • 오승열;장선웅;김대현;윤홍주
    • 수산해양교육연구
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    • 제24권2호
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    • pp.333-345
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    • 2012
  • NOAA/AVHRR, Topex/Poseidon, and Jason-1 data were used to analyze sea surface temperatures and thermal fronts in the North East Asia Seas. Temporal and spatial analyses were based on data from 1993 to 2008. The amplitude and phase for the annual mode on SL and SST were investigated with harmonic analysis. The geographical distribution of amplitudes for comparison of SL and SST are slightly reverse in southwest-northeast tilted direction. The time series analysis conducted on the entire researched area presented consistent pattern. Peak of Sea Level was presented 1~2 months after the peak of the surface sea temperature was shown. This explains that Sea Level change occurs after the generation of surface sea temperature change in sea. The Sobel edge detection method delineated four fronts. Thermal fronts generally occurred over steep bathymetric slopes. Annual amplitudes and phases were bounded within these frontal areas.

An Ultrastructural Investigation of Infection Threads in Sesbania rostrata Stem Nodules Induced by Sinorhizobium sp. Strain MUS10

  • Krishnan Hari B.
    • 한국작물학회지
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    • 제49권4호
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    • pp.316-324
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    • 2004
  • Sinorhizobium sp. strain MUS10 forms nitrogen-fixing stem nodules on Sesbania rostrata, a tropical green manure crop. In this study, the ultrastructural events associated with the formation of stem nodules were investigated. Sinorhizobium sp. strain MUS10 entered the host tissue through cracks created by the emerging adventitious root primordia and multiplied within the intercellular spaces. During early phases of infection, host cells adjacent to invading bacteria revealed cellular damage that is typical of hypersensitive reactions, while the cells at the inner cortex exhibited meristematic activity. Infection threads were numerous in S-day-old nodules and often were associated with the host cell wall. In several cases, more than one infection thread was found in individual cells. The junction at which the host cell walls converged was often enlarged due to fusion of intracellular branches of infection threads resulting in large infection pockets. The infection threads were made up of a homogeneous, amorphous matrix that enclosed the bacteria. Several finger-like projections were seen radiating from these enlarged infection threads and were delineated from the host cytoplasm by the plasma membrane. As in Azorhizobium caulinodans induced root nodules, the release of Sinorhizobia from the infection threads into the plant cells appears to be mediated by 'infection droplets'. A 15-day­old Sesbania stem nodule revealed typical ultrastructure features of a determinate nodule, containing several bacterioids within symbiosomes.

Immunotoxicological Effects of Mouse CpG Oligodeoxynucleotides in Lupus-prone NZB/NZW F1 Mice

  • Kim, Bo-Hwan;Seo, Dong-Jin;Jung, Soon-Hee;Kim, Soo-Ki
    • Molecular & Cellular Toxicology
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    • 제5권3호
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    • pp.207-215
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    • 2009
  • Despite wide therapeutic use of CpG ODN against infection, allergy and cancer, the safety and toxicity of CpG ODNs were poorly delineated. Thus, we investigated whether optimal dosing of CpG ODN would affect immunotoxicological parameters in NZB/NZW F1 mice. Comparisons were made among control, non-CpG ODN and mouse CpG ODN ($10{\mu}g$)-treated groups for 4 weeks. To gauge the immunotoxicity of CpG ODNs, we measured nonspecific parameters, degree of lupus nephritis, proteinuria, or autoantibody, and cytokine expression in mRNA level of lymphocytes. We found that there were no significant differences among groups in nonspecific immunotoxicological profiles and in evaluation profiles of glomerulonephritis. However, titer of anti-dsDNA and anti-cardiolipin antibodies in mouse CpG ODN group rose three or eight-fold higher than in control group. Collectively, CpG ODN might be clinically less immunotoxic in terms of clinical profiles in lupus-prone NZB/NZW F1 mice, in spite of high autoantibody titer in CpG ODN treated groups.

Study of Urban Land Cover Changes Relative to Demographic and Residential Form Changes: A Case Study of Wonju City, Korea

  • Han, Gab-Soo;Kim, Mintai
    • Journal of Forest and Environmental Science
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    • 제31권4호
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    • pp.288-296
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    • 2015
  • In many very high density cities in Asia in which there is limited area to expand, growth is forced upward as well as outward. Densely packed detached houses and low-rise buildings are replaced by lower density high-rises, leaving open spaces between high-rise buildings. Through this process, areas that formerly did not have much green space gain valuable green spaces, and new ecological corridors and patches are created. In this study, the demographic and housing-type changes of Wonju City were delineated using land use maps, aerial images, census data, and other administrative data. Green area changes were calculated using land cover data derived from multi-year Landsat TM satellite imagery. The values were then compared against demographic and housing-type changes for each administrative unit. The overall results showed a decrease of forested area in the city and an increase of developed area. Urban sprawl was clearly visible in many of the suburban areas. However, as expected, we also detected areas in which greenness did not decrease when the population greatly increased. These areas were characterized by residential building complexes of ten or more stories. If an equal number of housing units had been built as detached houses, these areas would not have kept as much green space. Our research result showed that high-density and high-rise residential structures can offer an alternative means to protect or create urban green spaces in high-density urban environments.

Using habitat suitability model for the wild boar (Sus scrofa Linnaeus) to select wildlife passage sites in extensively disturbed temperate forests

  • Rho, Paikho
    • Journal of Ecology and Environment
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    • 제38권2호
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    • pp.163-173
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    • 2015
  • The occurrence of wild boars (Sus scrofa Linnaeus) and reports of wildlife-vehicle conflicts (i.e., road-kill) involving them have increased in natural forest regions of Korea. In the past few decades, many wildlife passages have been constructed to reduce vehicle collisions involving wildlife species. However, few studies have assessed the habitat suitability of target wildlife species when locating the construction sites of wildlife passages. Target species rarely use wildlife passages if built in an inappropriate location. Therefore, a quantitative habitat model is required to find suitable sites for wildlife passages that can connect the fragmented forest patches of wildlife habitats in Korea. In this study, the wild boar was selected as the target species, and six environmental variables (percentage of Quercus forest, slope aspect, distance to roads, water accessibility, forest stand age and density) were measured. The habitat model for wild boars was developed with a Delphi survey, and habitat suitability maps were delineated for the provinces of Gangwon-do and Jeollanam-do. In this study, 298 and 64 boars were observed in Gangwon-do and Jeollanam-do, respectively. Observations of wild boars derived from the second nationwide natural environmental survey were used to evaluate the habitat model. Habitat suitability maps that superimposed existing road networks suggested that wild boar habitats were severely fragmented in both provinces, particularly in Gangwon-do. To connect the fragmented habitats and prevent wildlife-vehicle collisions, this study proposes 11 and 5 wildlife passage sites in Gangwon-do and Jeollanam-do, respectively.

An NMR study on the intrinsically disordered core transactivation domain of human glucocorticoid receptor

  • Kim, Do-Hyoung;Wright, Anthony;Han, Kyou-Hoon
    • BMB Reports
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    • 제50권10호
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    • pp.522-527
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    • 2017
  • A large number of transcriptional activation domains (TADs) are intrinsically unstructured, meaning they are devoid of a three-dimensional structure. The fact that these TADs are transcriptionally active without forming a 3-D structure raises the question of what features in these domains enable them to function. One of two TADs in human glucocorticoid receptor (hGR) is located at its N-terminus and is responsible for ~70% of the transcriptional activity of hGR. This 58-residue intrinsically-disordered TAD, named tau1c in an earlier study, was shown to form three helices under trifluoroethanol, which might be important for its activity. We carried out heteronuclear multi-dimensional NMR experiments on hGR tau1c in a more physiological aqueous buffer solution and found that it forms three helices that are ~30% pre-populated. Since pre-populated helices in several TADs were shown to be key elements for transcriptional activity, the three pre-formed helices in hGR tau1c delineated in this study should be critical determinants of the transcriptional activity of hGR. The presence of pre-structured helices in hGR tau1c strongly suggests that the existence of pre-structured motifs in target-unbound TADs is a very broad phenomenon.

Rescuing p53 from mdm2 by a pre-structured motif in intrinsically unfolded SUMO specific protease 4

  • Kim, Do-Hyoung;Lee, Chewook;Kim, Bom;Lee, Si-Hyung;Han, Kyou-Hoon
    • BMB Reports
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    • 제50권10호
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    • pp.485-486
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    • 2017
  • Many intrinsically unstructured/unfolded proteins (IUPs) contain transient local secondary structures even though they are "unstructured" in a tertiary sense. These local secondary structures are named "pre-structured motifs (PreSMos)" and in fact are the specificity determinants for IUP-target binding, i.e., the active sites in IUPs. Using high-resolution NMR we have delineated a PreSMo active site in the intrinsically unfolded mid-domain (residues 201-300) of SUMO-specific protease 4 (SUSP4). This 29-residue motif which we termed a p53 rescue motif can protect p53 from mdm2 quenching by binding to the p53-helix binding pocket in mdm2(3-109). Our work demonstrates that the PreSMo approach is quite effective in providing a structural rationale for interactions of p53-mdm2-SUSP4 and opens a novel avenue for designing mdm2-inhibiting anticancer compounds.