• Title/Summary/Keyword: deep-sea sediment

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Identification and Characterization of the Antifungal Substances of a Novel Streptomyces cavourensis NA4

  • Pan, Hua-Qi;Yu, Su-Ya;Song, Chun-Feng;Wang, Nan;Hua, Hui-Ming;Hu, Jiang-Chun;Wang, Shu-Jin
    • Journal of Microbiology and Biotechnology
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    • v.25 no.3
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    • pp.353-357
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    • 2015
  • A new actinomycete strain NA4 was isolated from a deep-sea sediment collected from the South China Sea and showed promising antifungal activities against soilborne fungal pathogens. It was identified as Streptomyces cavourensis by morphological, physiological, and phylogenetic analyses based on its 16S rRNA gene sequence. The main antifungal components were isolated and identified from the fermentation culture as bafilomycins B1 and C1. These compounds exhibited significant antifungal activities and a broad antifungal spectrum. The results suggest that the Streptomyces cavourensis NA4 and bafilomycins B1 and C1 could be used as potential biocontrol agents for soilborne fungal diseases of plants.

Modern Sedimentary Environments Within the Gogunsan Archipelago (고군산군도 내측해역의 현생퇴적환경)

  • Lee, Hee-Jun;Kim, Min-Ji;Kim, Tae-Kyung
    • Ocean and Polar Research
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    • v.30 no.4
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    • pp.519-536
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    • 2008
  • The relatively tranquil area within the Gogunsan Archipelago was for the first time investigated preliminarily with respect to modern sedimentological processes in association with the emplacement of the Saemangeum Dyke. Basic sedimentological observations, bathymetry and surface sediments were performed twice during 2006-2008 to compare the results and elaborate changes during that period of time. In addition, sediment dynamical observations were carried out with latest measuring equipment along two transects crossing the entrances of the archipelago, including 12-hour onboard measurements of current, suspended sediments, temperature, and salinity. This dataset was used to reveal hydrodynamic characteristics for spring season April-May and to estimate the direction and relative magnitude of the net flux of suspended sediments. There occurred three depositional areas (A to C) within the archipelago, where sediment texture was also changed. In area A, around Yami Island and the dyke, and area B, in the center of the archipelago, surface sediments became coarsened over the two-year period; sand content increased 5% at the expense of silt content in the former, whereas silt content increased 3% at the expense of clay content in the latter. By comparison, area C in the western entrance of the archipelago shows a textural trend of fining with more silt and clay (combined increase of 5%) at the expense of sand content. The accumulation of sediments in areas A and B is attributable to the sand and silt resuspended from the seabed sediments off sector 4 of the dyke during the winter. The origin of the fine materials depositing on area C is uncertain at present, although suspended sediments moving offshore around the archipelago may be one of the most likely candidates for the source. The temperature of seawater increased rapidly from $9-10^{\circ}C$ in April to $14-16^{\circ}C$ in May, whereas salinity remained more or less constant at 31-32%o during the two months. Both of these parameters showed little variations with depth through a tidal cycle, suggesting good mixing of seawater without any help of significant waves. The consistency of salinity during a tidal cycle also indicates no insignificant effects of freshwater from the rivers Mangyung and Donjin emitting through the opening gap near Sinsi Island. The suspended sediment concentrations were higher at the entrance between Sunyu and Sinsi islands than at the entrance between Hoenggyong and Sinsi islands, ranging from 20 and 30 mg/l and from 5 and 15 mg/l, respectively at the sea surface. Although tidal currents were variable across a transect between Sunyu and Sinsi islands, the currents across the entrance between Hoenggyong and Sinsi islands flowed consistently in the same direction all over the transect during a tidal cycle. The estimation of net flux of suspended sediments indicates that suspended sediments are transferred to the Gogunsan Archipelago mainly through a relatively deep trough adjacent to Sinsi Island toward the shallow area around Yami Island and the dyke.

Origin of Spherule Samples Recovered from Antarctic Ice Sheet-Terrestrial or Extraterrestrial?

  • Sekimoto, Shun;Kobayashi, Takayuki;Takamiya, Koichi;Ebihara, Mitsuru;Shibata, Seiichi
    • Nuclear Engineering and Technology
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    • v.48 no.2
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    • pp.293-298
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    • 2016
  • Thirty-eight spherules from the Antarctic ice sheet were analyzed using neutron activation analysis under two different conditions to investigate their origin. In almost all of these spherules, the contents of iron, cobalt, and manganese were determined to be 31% to 88%, 17 mg/kg to 810 mg/kg, and 0.017% to 7%, respectively. A detectable iridium content of 0.84 mg/kg was found in only one spherule, which was judged to be extraterrestrial in origin. A comparison of elemental compositions of the Antarctic spherules analyzed in this study with those of deep-sea sediment spherules and those of terrestrial materials revealed that most of the Antarctic spherules except for the sample in which iridium was detected could not be identified as extraterrestrial in origin.

Implications of Deep Nitrite in the Ulleung Basin (울릉 분지 저층수의 아질산염)

  • Lee, Tong-Sup;Kim, Il-Nam;Kang, Dong-Jin;Kim, Dong-Seon
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.12 no.3
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    • pp.239-243
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    • 2007
  • Presence of bottom water nitrite in the Ulleung Basin was remarkable because it is totally unexpected phenomenon at such an oxygen-rich environment. Yet no scientific explanation was set forward. Of several plausible explanations, following the Ockham's suggestion, a leaching of nitrite as an intermediate product of denitrification in the top sediment at the slope is most agreeable to given environmental settings. There seems no complementary process to make up the loss of N in the Ulleung Basin, which seems contribute to the characteristically low N:P ratio in the deep waters. If warming proceeds that weakens the thermohaline circulation, a current biological pump may stall and the phytoplankton assemblage might replaced drastically. If so this will pause an utmost challenge to the ecosystem of the East/Japan Sea. Still there remains a contradictory sedimentary signature that requests further explanation regarding the N (or organic C)-cycle such as extraordinarily high organic carbon content despite abundant oxidants in the overlying waters.

Assemblage changes of benthic foraminifera and regional paleoenvironmental changes in a piston core from the Okinawa Trough, Japan (오끼나와 해곡 주장사료 퇴적물에 대한 저서생 유공충의 군집변화와 지역해 고환경변화)

  • Hyun, Sang-Min
    • The Korean Journal of Quaternary Research
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    • v.23 no.2
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    • pp.48-55
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    • 2009
  • To investigate the paleoceanographic environmental changes around the Okinawa Trough, Japan, a piston core (RN88-PC5) was conducted on benthic foraminiferal species composition, assemblage, sedimentological and geochemical analyses. Trubidite sediment intercalated in studied core contains different benthic foraminiferal species, dwelling in shallow coral reef species, from normal hemipelagic sediment. These different benthic foraminiferal species and its assemblage are interpreted as reworked sediment when turbidite current occurred, synchronically. Grain size analysis clearly showed that mean grain size difference occurred between trubidite and hemipelagic sediments. Geochemical analysis also showed the difference of chemical composition between two sedimentary facies. Results of the foraminiferal oxygen isotope analysis showing global surface water warming records since the last 10 ka. The geochemcial analysis and previous works showed that turbidite sediment of studied core indicating sporadic occurrence of regional paleoceanographic events. Assemblage of shallow coral reef benthic foraminifera especially occurred with turbidite layer clearly support the sporadic occurrence of paleoceanographic events such as regional earthquake.

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Estimate of Manganese and Iron Oxide Reduction Rates in Slope and Basin Sediments of Ulleung Basin, East Sea (동해 울릉분지 퇴적물에서 망간산화물과 철산화물 환원율 추정)

  • Choi, Yu-Jeong;Kim, Dong-Seon;Lee, Tae-Hee;Lee, Chang-Bok
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.14 no.3
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    • pp.127-133
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    • 2009
  • In order to determine organic carbon oxidation by manganese and iron oxides, six core sediments were obtained in slope and basin sediments of Ulleung Basin in East Sea. The basin sediments show high organic carbon contents (>2%) at the water depths deeper than 2,000 m; this is rare for deep-sea sediments, except for those of the Black Sea and Chilean upwelling regions. In the Ullleung Basin, the surface sediments were extremely enriched by Manganese oxides with more than 2%. Maximum contents of Fe oxides were found at the depth of $1{\sim}4cm$ in basin sediments. However, the high level of Mn and Fe oxides was not observed in slope sediment. Surface manganese enrichments (>2%) in Ulleung Basin may be explained by two possible mechanisms: high organic carbon contents and optimum sedimentation rates and sufficient supply of dissolved Manganese from slope to the deep basin. Reduction rates of iron and manganese oxides ranged from 0.10 to $0.24\;mmol\;m^{-2}day^{-1}$ and from 0.30 to $0.57\;mmol\;m^{-2}day^{-1}$, respectively. In Ulleung Basin sediments, $13{\sim}26%$ of organic carbon oxidation may be linked to the reduction of iron and manganese oxides. Reduction rates of metal oxides were comparable to those of Chilean upwelling regions, and lower than those of Danish coastal sediments.

Analysis of Hydrocarbon Trap in the Southwestern Margin of the Ulleung Basin, East Sea (동해 울릉분지 남서주변부의 탄화수소 트랩 분석)

  • Lee, Minwoo;Kang, Moo-Hee;Yoon, Youngho;Yi, Bo-Yeon;Kim, Kyong-O;Kim, Jinho;Park, Myong-ho;Lee, Keumsuk
    • Economic and Environmental Geology
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    • v.48 no.4
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    • pp.301-312
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    • 2015
  • A commercial gas field was found in the southwestern continental shelf of the Ulleung Basin, East Sea in the late 1990s. To develop additional gas field, an exploration well was drilled through the coarse infill of submarine canyon near the gas field, but it was uneconomic to develop hydrocarbons. Using newly acquired deep seismic reflection and previous well data, we have identified additional geological structure which has hydrocarbon potentials below submarine canyons in the southwestern margin of the basin. Based on the interpretation of the deep seismic reflection and well data, the sequences of the study area can be classified into the syn-rift megasequence(MS1), post-rift megasequence(MS2), syn-compressional megasequence(MS3), and post-compressional megasequence(MS4) in relation to the tectonic events. MS1, deposited simultaneously with the basin formation before the middle Miocene, is characterized by chaotic seismic facies with low- to moderate-amplitude and low frequency reflections. MS2 comprises laterally continuous, low- to moderate-amplitude reflections, showing progradational stacking patterns due to high rates of sediment supply during basin expansion in the middle Miocene. MS3 is mainly composed of continuous reflections with high amplitude and moderate- to high-frequency which are interpreted as coarse-grained sediments. The coarse-grained sediments of MS3 sequence is widely truncated by several submarine canyons which filled with fine-grained sediment of MS4 to form a stratigraphic trap of hydrocarbon. Therefore, the reservoir and seal of the hydrocarbon trap in the study area are coarse-grained sediment of MS3 and submarine canyon filled with fine-grained sediment of MS4, respectively. A flat-spot seismic anomaly, which may indicate the presence of hydrocarbon, is observed within the stratigraphic trap.

Quaternary Diatom Assemblages from Sediment Core GC 98-06 in the Southern Drake Passage, Antarctica (드레이크 해협 남부 코어퇴적물에서 산출된 제 4기 규조 화석 연구)

  • Lee, Jong-Deock;Yoon, Ho-Il;Yun, Hye-su;Kim, Hyo-Jeong;Bak, Young-Suk
    • Journal of the Korean earth science society
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    • v.23 no.5
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    • pp.442-453
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    • 2002
  • A total of 64 species belonging to 23 genera of diatom fossils are identified from the Core GC 98-06 in the southern Drake Passage, Antarctica. The diatom assemblages are dominated by Actinocyclus actinochilus, Coscinodiscus asteromphalus, Eucampia antarctica, Fragilariopsis kerguelensis, Thalassiosira lentiginosa, T. ritscheri and T. anguste-lineata, which are about 73% of the assemblage. Open water species are more abundant than sea ice species in the diatom assemblages of the core. Fragilariopsis. kerguelensis and Thalassiosira lentiginosa are valuable indicators of the habitats. Especially, F. kerguelensis represent the influence of waters from the Antarctic Circumpolar Current. Sea ice taxa represents the influence of cold waters from Bransfield Strait Water and melt water from the sea-ice at during warm periods. The reworked diatoms such as Denticulopsis dimopha (Miocene) and D. hustedtii (Pliocene) are occurred with Quaternary species (Actinocyclus actinochilus, Fragilariopsis kerguelensis, Thalassiosira lentiginosa, and T. glacilis). The presence of reworked diatoms indicates the transportation of the older diatoms into the Drake passage from the circumference sediments, due to strong bottom current activity of Antarctic circumpolar deep water.

Spatiotemporal Distribution of Macrobenthic Communities in the Coastal Area of Uljin and Its Relation to Environmental Variables (울진 주변 해역 대형저서동물 군집의 시·공간 분포와 환경요인과의 관계)

  • Yu, Ok-Hwan;Paik, Sang-Gyu;Lee, Hyung-Gon;Lee, Jae-Hac
    • Ocean and Polar Research
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    • v.33 no.4
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    • pp.421-434
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    • 2011
  • Although thermal effluent from coastal power plants affects marine ecosystems, few studies have examined the spatiotemporal distribution of macrobenthic communities in a coastal area of Korea with thermal discharge. This study analyzed the species composition and abundance of a macrobenthic community in relation to environmental variables for a period of 1 year. In total 334 macrobenthic faunal species were collected; the mean density was 3,221 ind/$m^2$. The number of species and the density of macrobenthic fauna increased with distance from the thermal discharge site. Cluster analysis indicated that the macrobenthic community could be divided into two groups: group I in shallow (< 30 m deep) and group II in the outer areas (> 30 m deep). Group I showed the lowest species density and diversity. Four polychaetes, including Magelona japonica, Spiophanes bombyx, Scolotoma longifolia and Chaetozone setosa, all of which have been dominant species since 1987, exhibited higher mean densities in the area distant from the thermal discharge (the outer and north areas). Conversely, the warm-adapted and opportunistic species, such as the amphipods Urothoe convexa and Mandibulophoxus mai, the bivalve Felaniella sowerbyi, and the polychaete Rhynchospio sp., were more abundant in the thermal discharge region. The results of this study indicate that thermal effluent influences macrobenthic communities in the shallow area, while other environmental variables, such as depth, sediment grain size, and TOC, are more important determinants of the macrobenthic communities in deeper regions (> 30 m deep).

The Vertical Fluxes of Particles and Radionuclides in the East Sea

  • Moon, Deok-Soo;Kim, Kee-Hyun;Noh, Il
    • Journal of the korean society of oceanography
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    • v.35 no.1
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    • pp.16-33
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    • 2000
  • In order to measure the vertical fluxes of particles and reactive radionuclides such as thorium and polonium isotopes, Dunbar-type sediment traps were freely deployed at the Ulleung Basin and in warm and cold water masses around the polar front of the East Sea. We estimated the ratios of the catched (F) to the predicted $^234$Th fluxes (P) using natural tracers pair $^234$Th-$^238$U. The F/P ratios are decreased with increasing water depth. Whereas the concentrations of suspended particles are homogeneous in water column, the mass fluxes are also decreased with increasing water depth like the F/P ratios. These facts indicate that organic matters of settling particles are destructed within the euphotic layer due to decomposition. Whereas regenerations of sinking particles are negligible in the cold water mass, about 80% of them are regenerated in the warm water mass during falling of large particles. These downward mass fluxes are closely correlated with their primary productions in euphotic zone. The activities of $^234$Th, $^228$Th and $^210$Po in the sinking material were increased with water depth. Because $^234$Th steadily produced in the water column are cumulatively adsorbed on the surface of sinking particles, vertical $^234$Th fluxes were observed to increase with water depth. Therefore, these sinking particles play important roles in transporting the particle reactive elements like thorium from surface to the deep sea. The scavenging processes including adsorption and settling reactions generate radio-disequilibrium between daughter and parent nuclides in water column. The activity ratios of $^234$Th/$^238$U and $^228$Th/$^228$Ra were observed to be < 1.0 in the surface water and approached to be equilibrium below the thermocline. The extent of the deficiency of daughter nuclides compared to the parents nuclide was highly correlated with the vertical particle flux. Because most of the $^210$Po in the surface water are scavenged on a labile phase and are recycled at sub-surface depths (< 200 m), the $^210$Po are always observed to be excess activities compared to $^226$Ra in surface water.

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