• Title/Summary/Keyword: data generation model

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The Protostome database (PANM-DB): Version 2.0 release with updated sequences (연체동물 NGS 데이터 분석을 위한 PANM 데이터베이스 업데이트 (Version II))

  • Kang, Se Won;Park, So Young;Patnaik, Bharat Bhusan;Hwang, Hee Ju;Chung, Jong Min;Song, Dae Kwon;Park, Young-Su;Lee, Jun Sang;Han, Yeon Soo;Park, Hong Seog;Lee, Yong Seok
    • The Korean Journal of Malacology
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    • v.32 no.3
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    • pp.185-188
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    • 2016
  • PANM-DB (version 1.0) was constructed as a web-based interface for the analysis and annotation of Next-Generation Sequencing (NGS) data of Mollusca, Arthropoda, and Nematoda. The database collected the sequences of Protostomes (Mollusca, Arthropoda, and Nematoda) from the NCBI Taxonomy Browser, and the same were compiled in a multi-FASTA format and stored using the formatdb program. This improved the processing of the RNA-seq sequences in terms of speed and hit percentage. PANM-DB has been successfully used for the transcriptome annotation of butterfly, land snail, and other commercial mollusca. We have improved the database by updating the same with new sequences and version 2.0 contains a total of 7,571,246 protein sequences (two times more as compared to version 1.0). Furthermore, the updated version contains the Cephalopoda database. The constructed web interface is available that independently analyses following these updates that is an improvement of the mollusks BLAST server. The updated version of PANM-DB will be helpful for the analysis of the NGS based sequencing data of non-model species, especially Mollusca, Arthropoda, Nematoda.

A Study for the Optimum pH of Hydrogen Production in Anaerobic Batch Reactor (혐기성 회분반응기에서 수소생산 시 최적 pH 산정에 관한 연구)

  • Jun, Yoon-Sun;Park, Jong-Il;Yu, Seung-Ho;Lee, Tae-Jin
    • Journal of Korean Society of Environmental Engineers
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    • v.29 no.1
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    • pp.54-61
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    • 2007
  • The influences of pH were investigated for anaerobic hydrogen gas production under the constant pH condition ranged from pH 3 to 10. Carbon dioxide and hydrogen gas were main components of the gas but methane was not detected in the produced gas when sucrose was added in enrichment medium. When the modified Gompartz equation was applied for the statistical analysis of experimental data, a hydrogen production potential and maximum gas production rate at pH 5 were 1,182 mL and 112.46 mL/g dry wt biomass/hr. The hydrogen conversion ratio was 22.56%. The butyrate/acetate ratios at pH 5 and pH 6 are 1.63 and 0.38. Higher butyrate/acetate ratio produced more hydrogen gas generation. The Haldane equation model was used to find the optimum pH and fitted well with the experimental data$(r^2=0.98)$. The optimum pH and specific hydrogen production were 5.5 and 119.61 mL/g VSS/h.

Analyzing Site Characteristics and Suitability for Wind Farm Facilities in Forest Lands (산지 내 풍력발전단지 입지 특성 및 적합성 분석)

  • Kwon, Soon-Duk;Joo, Woo-Yeong;Kim, Won-Kyung;Kim, Jong-Ho;Kim, Eun-Hee
    • Journal of the Korean Association of Geographic Information Studies
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    • v.17 no.4
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    • pp.86-100
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    • 2014
  • The purposes of this study are to provide a guideline for the suitability of wind farm facilities in forest lands and to suggest improvement plans of policies and systems to minimize the damage of forest lands. First, we implemented a literature review and field surveys to examine and select factors for the suitability of wind farm facilities in forest lands. Spatial database for selected location factors of wind farm facilities in forest lands was constructed to develop the suitability model for locating wind farm facilities focusing on Gangwon-do. Data used in this study include wind power resource, legal mountainous preserved area, forest roads, developed areas, forest class, and other spatial data. In order to find specific-sized potential areas for a certain number of wind farm turbines, we used block statistics and focal statistics methods. As a result, the areas for potential wind farm locations were 1,261ha from a block statistics method and 1,411ha from a focal statistics method. Based on the outputs of this research, it is required to make an urgent solution for the prevention of forest disaster and to prepare reduction measures for the destruction of ridge landscape.

A Study on the Profitable Urban Park Model using Smart Street Light System (스마트 가로등 시스템을 적용한 수익형 도시공원모델에 관한 연구)

  • Lee, Ji-Hee;Cho, Han-Bo;Kim, Tae-Han
    • Journal of the Korean Institute of Landscape Architecture
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    • v.40 no.4
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    • pp.28-35
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    • 2012
  • Recently, as the social interest increase has been focused on new renewable energy system to build-up sustainable urban planning system, the related studies have been actively conducting. As well as in other areas, the construction area, which accounts for over 40% of the total energy consumption, clearly showed this tendency. Whereas, various landscape facilities applying renewable energy equipments have been manufactured and installed, systematic study available for planning and designing is rarely found in Korea. This study is expected to contribute to the landscape planning and designing by quantifying the energy-efficient and economic advantages of the renewable energy system for landscape facilities. For this purpose, the analysis on the energy-efficiency and economic values under the scenario that the current fossil power supply for the streetlights in urban parks in Seoul, Daegu, and Incheon were replaced by photovoltaic power generation were performed through RETScreen$^{(R)}$ a clean energy simulation program based on the NASA Satellite Meteorological Data. As a result, the generated power and the economic values vary depending on the climatic features of the appointed cities. This study will be used to build up the effective decision-making in applying the clean renewable system to the plan and design of landscaping.

Audio Stream Delivery Using AMR(Adaptive Multi-Rate) Coder with Forward Error Correction in the Internet (인터넷 환경에서 FEC 기능이 추가된 AMR음성 부호화기를 이용한 오디오 스트림 전송)

  • 김은중;이인성
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.26 no.12A
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    • pp.2027-2035
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    • 2001
  • In this paper, we present an audio stream delivery using the AMR (Adaptive Multi-Rate) coder that was adopted by ETSI and 3GPP as a standard vocoder for next generation IMT-2000 service in which includes combined sender (FEC) and receiver reconstruction technique in the Internet. By use of the media-specific FEC scheme, the possibility to recover lost packets can be much increased due to the addition of repair data to a main data stream, by which the contents of lost packets can be recovered. The AMR codec is based on the code-excited linear predictive (CELP) coding model. So we use a frame erasure concealment for CELP-based coders. The proposed scheme is evaluated with ITU-T G.729 (CS-ACELP) coder and AMR - 12.2 kbit/s through the SNR (Signal to Noise Ratio) and the MOS (Mean Opinion Score) test. The proposed scheme provides 1.1 higher in Mean Opinion Score value and 5.61 dB higher than AMR - 12.2 kbit/s in terms of SNR in 10% packet loss, and maintains the communicab1e quality speech at frame erasure rates lop to 20%.

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Development a Measurement Scale for Analysis on Factors Influencing College Choice of College Freshman's (전문대학 신입생들의 대학선택 영향 요인 분석을 위한 측정도구 개발)

  • Kim, Myung-Eun;Jang, Won-Seok
    • The Journal of the Korea Contents Association
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    • v.16 no.7
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    • pp.50-62
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    • 2016
  • The aim of this study was to develop scale of test taker to affect on process of selection of college. The study procedures were performed as follow : establish of study model, item generation, verification of content validity, 1st and 2nd pilot test and verification of construct validity and reliability. In order to verification of validity and reliability, 230 freshman were surveyed and the data were analyzed by mean, standard deviation, skewness. kurtosis, Pearson correlation, Verimax factor analysis and Cronbach's ${\alpha}$. As result of factor analysis, the 15 factors(61 items) that explain 68.37% of the total variance were extracted and each factors were classified by attribution as follow : Information collection-mass media(4items), college activity (3items), support and environment(4items), education(5items), Influential person on decision making(3items), education quality(4items), education service(5items), reputation(3items), accessibility(2items), personal circumstances(2items), college's mass media(5items), promotion (4items), on-line(4items), person's PR (3items), College image(10items). Cronbach's ${\alpha}$ of total items was 0.916 and Cronbach's ${\alpha}$ of each factors were showed range between 0.694~0.878. Measurement scale of this study may be utilized to collect basic data be required to establish policy strategy of local college be faced with difficulty of admission recruitment.

Study on SCS CN Estimation and Flood Flow Characteristics According to the Classification Criteria of Hydrologic Soil Groups (수문학적 토양군의 분류기준에 따른 SCS CN 및 유출변화특성에 관한 연구)

  • Ahn, Seung-Seop;Park, Ro-Sam;Ko, Soo-Hyun;Song, In-Ryeol
    • Journal of Environmental Science International
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    • v.15 no.8
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    • pp.775-784
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    • 2006
  • In this study, CN value was estimated by using detailed soil map and land cover characteristic against upper basin of Kumho watermark located on the upper basin of Kumho river and the hydrologic morphological characteristic factors were extracted from the basin by using the DEM document. Also the runoff analysis was conducted by the WMS model in order to study how the assumed CN value affects the runoff characteristic. First of all, as a result of studying the soil type in this study area, mostly D type soil was Identified by the application of the 1987 classification criteria. However, by that in 1995, B type soil and C type soil were distributed more widely in that area. When CN value was classified by the 1995 classification criteria, it was estimated lower than in 1987, as a result of comparing the estimated CNs by those standars. Also it was assumed that CN value was underestimated when the plan for Geum-ho river maintenance was drawn up. As a result of the analysis of runoff characteristic, the pattern of generation of the classification criteria of soil groups appeared to be similar, but in the case of the application of the classification criteria in 1995, the peak rate of runoff was found to be smaller on the whole than in the case of the application of the classification criteria in 1987. Also when the statistical data such as the prediction errors, the mean squared errors, the coefficient of determination and other data emerging from the analysis, was looked over in total, it seemed appropriate to apply the 1995 classification criteria when hydrological soil classification group was applied. As the result of this study, however, the difference of the result of the statistical dat was somewhat small. In future study, it is necessary to follow up evidence about soil application On many more watersheds and in heavy rain.

An Analysis of the Stages of Teachers' Concerns Regarding Education on Mobile Application Development: An Application of CBAM (교사의 앱 개발 교육에 대한 관심도 분석: 관심중심수용모형(CBAM)을 중심으로)

  • Yoon, Seonghye;Kang, Woori
    • Journal of The Korean Association of Information Education
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    • v.22 no.5
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    • pp.509-517
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    • 2018
  • As the necessity of maker education is being emphasized and the app generation is now entering school, expectations concerning the impact of app development education are rising in the field of education. The introduction and rise in popularity of a new type of education, such as app development education, requires a change in attitude among teachers. Therefore, this study focused on the concerns of in-service teachers regarding app development education by applying the Concerns-Based Adoption Model (CBAM) of Hall and Hord (2015). For this purpose, the data was collected from 23 in-service teachers who attended a short teacher training session that introduced app development training. The data was converted to the relative intensity based on the stage of concerns questionnaire (SoCQ) scoring device and was expressed as the SoCQ profile. The results of the survey concerning app development education showed that the stage 0 concern (unconcerned) was reported most frequently by teachers and the stage 4 concern (consequence) was reported least frequently. This kind of result, which is typical at the beginning of the introduction of a new education program, indicates that teachers recognize app development education but do not have sufficient information regarding it. Qualitative results also showed that teachers understand the educational possibilities of app development education, but they were worried about the difficulties expected to be applied in the field. Based on these results, we suggest that more detailed information on app development education be provided through teacher training.

The Evaluation of Climate Change Impacts on the Water Scarcity of the Han River Basin in South Korea Using High Resolution RCM Data (고해상도 RCM 자료를 이용한 기후변화가 한강유역의 수자원(이수적 측면)에 미치는 영향 평가)

  • Kim, Soo-Jun;Kim, Byung-Sik;Jun, Hwan-Don;Kim, Hung-Soo
    • Journal of Korea Water Resources Association
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    • v.43 no.3
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    • pp.295-308
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    • 2010
  • As an attempt to explore the impact of droughts which may be worse by the climate change, the change in the water balance of the Han-river basin is analyzed. To accomplish it, we suggest a procedure consisting of three successive sub-procedures: daily rainfall generation for 70 years by the RegCM3 RCM ($27{\times}27\;km$) with the A2 scenario, daily discharge simulations by SLURP using the generated daily rainfall data, and monthly water balance analysis by K-WEAP (Korean Water Evaluation and Planning System) based on the SLURP simulation. Since significant uncertainty is involved in forecasting the future water consumption and water yields, we assumed three water consumption scenarios and fifty water yields scenarios. Three water consumption scenarios are, namely, "LOW", "MEDIUM", and "HIGH" according to the expected amount of water consumption. The fifty daily discharges are obtained from the SLURP simulations during the drought period. Finally, water balance analysis is performed by K-WEAP based on 150 combinations from three water consumption scenarios and the fifty daily discharges. Analysis of water scarcity in small basins of the Han River basin showed concentration of water scarcity in some small basins. It was also found that water scarcity would increase in all small basins of the Han River basin.

Automated Geometric Correction of Geostationary Weather Satellite Images (정지궤도 기상위성의 자동기하보정)

  • Kim, Hyun-Suk;Lee, Tae-Yoon;Hur, Dong-Seok;Rhee, Soo-Ahm;Kim, Tae-Jung
    • Korean Journal of Remote Sensing
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    • v.23 no.4
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    • pp.297-309
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    • 2007
  • The first Korean geostationary weather satellite, Communications, Oceanography and Meteorology Satellite (COMS) will be launched in 2008. The ground station for COMS needs to perform geometric correction to improve accuracy of satellite image data and to broadcast geometrically corrected images to users within 30 minutes after image acquisition. For such a requirement, we developed automated and fast geometric correction techniques. For this, we generated control points automatically by matching images against coastline data and by applying a robust estimation called RANSAC. We used GSHHS (Global Self-consistent Hierarchical High-resolution Shoreline) shoreline database to construct 211 landmark chips. We detected clouds within the images and applied matching to cloud-free sub images. When matching visible channels, we selected sub images located in day-time. We tested the algorithm with GOES-9 images. Control points were generated by matching channel 1 and channel 2 images of GOES against the 211 landmark chips. The RANSAC correctly removed outliers from being selected as control points. The accuracy of sensor models established using the automated control points were in the range of $1{\sim}2$ pixels. Geometric correction was performed and the performance was visually inspected by projecting coastline onto the geometrically corrected images. The total processing time for matching, RANSAC and geometric correction was around 4 minutes.