• Proceedings of the Korea Information Processing Society Conference
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• 2016.04a
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• pp.270-273
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• 2016

암호데이터 중복제거 기술이란 클라우드 서버에 전송된 데이터를 기존의 클라우드 서버에 저장된 데이터와 비교하여 데이터의 중복된 저장을 방지하는 기술이다. 이러한 데이터 중복제거 기술은 다양한 보안 위협이 발생하는데, 이 중 소유권 위조 공격은 원본 데이터를 소유하지 않은 공격자가 데이터의 소유권을 획득하여 클라우드 스토리지에 저장된 데이터를 취득할 수 있는 위협이다. 이러한 위협을 해결하기 위해 암호화 기술을 적용한 여러 기술들이 제안되어왔지만 과도하게 많은 통신 횟수와 연산량으로 인해 효율성이 떨어지는 문제가 존재한다. 따라서 본 논문에서는 클라우드 스토리지에 저장되는 데이터의 기밀성과 무결성을 보장하며, 연산량과 통신량 측면에서 효율적인 암호데이터 중복제거 기술을 제안한다.

• Journal of Plant Biotechnology
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• v.48 no.3
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• pp.139-147
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• 2021

Since whole-genome duplication (WGD) of diploid Chrysanthemum nankingense and de novo assembly whole-genome of C. seticuspe have been obtained, they have afforded to perceive the diversity evolution and gene discovery in the improved investigation of chrysanthemum breeding. The robust tools of high-throughput identification and analysis of gene function and expression produce their vast importance in chrysanthemum genomics. However, the gigantic genome size and heterozygosity are also mentioned as the major obstacles preventing the chrysanthemum breeding practices and functional genomics analysis. Nonetheless, some of technological contemporaries provide scientific efficient and promising solutions to diminish the drawbacks and investigate the high proficient methods for generous phenotyping data obtaining and system progress in future perspectives. This review provides valuable strategies for a broad overview about the high-throughput identification, and molecular analysis of gene function and expression in chrysanthemum. We also contribute the efficient proposition about specific protocols for considering chrysanthemum genes. In further perspective, the proper high-throughput identification will continue to advance rapidly and advertise the next generation in chrysanthemum breeding.

• Proceedings of the Korean Information Science Society Conference
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• 2011.06a
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• pp.539-542
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• 2011

TAR와 같은 아카이브 포맷에는 파일 중복을 제거하는 기능이 포함되어 있지 않아서 리눅스 배포 미러와 같이 버전단위로 저장되는 시스템에서 디스크 공간의 낭비가 발생하였다. 본 연구에서는 파일 중복 제거 기능을 추가한 TAR형태의 압축 포맷인 DTAR와 이를 제어하는 DTM 유틸리티를 제안하였다. 주요 아이디어는 클라이언트에서 DTAR 생성 시, 헤더에 SHA1 해시 정보를 추가하여 DTM 유틸리티를 통해 SHA1 해시를 노드로 하는 R-B Tree를 생성하고 이를 서버에 저장된 해시 정보와 비교하여 DTAR내에서 중복이 없는 파일을 선택적으로 파일을 압축하고 서버로 백업하고 관리하는 것이다. 실험 결과 DTM을 통한 백업은 중복 데이터가 누적될수록 DTAR가 tar.gz보다 공간적인 측면이나 백업을 위한 데이터 패킷 전송 시간에서 크게 향상된 성능을 보였다.

• Proceedings of the Korea Information Processing Society Conference
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• 2018.05a
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• pp.172-173
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• 2018

CCTV 기술은 실시간으로 영상을 수집하여 저장소에 보관하는 기술을 의미한다. 이러한 환경에서 데이터 저장소의 가용성은 매우 중요하다. 데이터가 축적될수록 스토리지 공간의 확장은 매우 중요해지며, 이를 위해 최근에는 클라우드 스토리지를 이용하여 저장 공간을 비교적 수월하게 확장하고 이용할 수 있는 환경이 제시되고 있다. 하지만 이러한 환경에서도 데이터의 지속된 저장은 저장 공간의 추가 이용을 위한 비용의 증가로 직결되기 때문에 데이터를 효율적으로 저장하기 위한 방안의 논의되었다. 데이터 중복제거 기술은 이러한 기술 중 하나로 데이터의 중복된 저장을 방지하여 스토리지 공간을 보다 효율적으로 이용할 수 있도록 하는 기술이다. 하지만 CCTV 환경에 클라우드 스토리지와 데이터 중복제거 기술을 적용하면서 추가적인 보안 이슈가 발생하였다. 따라서 본 연구에서는 이러한 문제를 해결하기 위한 연구를 수행하며, 이를 통해 보다 효율적인 데이터 저장을 수행하는 동시에 안전하게 데이터를 보관하는 방법을 제안한다.

• Proceedings of the Korean Society for Bioinformatics Conference
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• 2006.02a
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• pp.71-76
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• 2006

Comparative genomic hybridization (CGH) is a technique for studying chromosomal changes in cancer. As cancerous cells multiply, they can undergo dramatic chromosomal changes, including chromosome loss, duplication, and the translocation of DNA from one chromosome to another. Chromosome aberrations have previously been detected using optical imaging of whole chromosomes, a technique with limited sensitivity, resolution, quantification, and throughput. Efforts in recent years to use microarrays to overcome these limitations have been hampered by inadequate sensitivity, specificity and flexibility of the microarray systems. The oligonucleotide CGH microarray system overcomes several scientific hurdles that have impeded comparative genomic studies of cancer. This new system can reliably detect single copy deletions in chromosomes. The system includes a whole human genome microarray, reagents for sample preparation, an optimized microarray processing protocol, and software for data analysis and visualization. In this study, we determined the sensitivity, accuracy and reproducibility of the new system. Using this assay, we find that the performance of the complete system was maintained over a range of input genomic DNA from 5 ug down to 0.15 ug.

• Proceedings of the Korean Society of Crop Science Conference
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• 2022.10a
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• pp.28-28
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• 2022

This paper presents the first genome assemblies of Philippine mangoes that provide valuable reference for varietal improvement and genomic studies on mango and related fruit crops. WE sequenced whole genomes of3 species, Mangifera odorata (Huani), Mangifera altissima (Paho), and Mangifera indica 'Carabao' (Sweet Elena). 'Carabao' is the major export variety of the Philippines; Paho is identified as vulnerable by the IUCN Red List of Threatened Species; Huani has fruit sap acrid which is the primary defense mechanism against insects and birds. We used Falcon, a diploid aware -de novo assembler to assemble SMRT generated long-read sequences. Falcon-unzip was employed to phase the output assembly producing larger contig sets (primary contigs) and shorter contigs corresponding to haplotypes (haplotigs). Assembly statistics were generated by comparing the assembly to a reference genome, Tommy Atkins, using Quality Assessment Tool (QUAST). Moreover, the extent of duplication and completeness of gene content was measured using Benchmarking Universal Single-Copy Orthologs (BUSCO). Draft assemblies with high duplications were processed using Purge Haplotigs and Purge Dups to lessen duplications with minimal impact on genome completeness. De novo assemblies of Huani, Paho and 'Carabao' were then generated with primary contig sizes of 463.64 Mb, 508.95 Mb and 401.51 Mb respectively. These draft assemblies of Huani, Paho and 'Carabao' showed 96.90%, 95.17% and 99.07% complete BUSCOs respectively which is comparable to 'Tommy Atkins' genome (98.6%). Using two mango transcriptome data (pooled RNA-seq from different mango varieties and tissues), 91-96% or 24-30 million reads were successfully mapped back for each generated assembly indicating high degree of completeness. The results obtained demonstrated the highly contiguous, phased, and near complete genome assembly of three Philippine mango species for structural and functional annotation of gene units, especially those with economic importance.

• Journal of KIISE
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• v.43 no.10
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• pp.1165-1172
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• 2016

In cloud storage environment, deduplication enables efficient use of the storage. Also, in order to save network bandwidth, cloud storage service provider has introduced client-side deduplication. Cloud storage service users want to upload encrypted data to ensure confidentiality. However, common encryption method cannot be combined with deduplication, because each user uses a different private key. Also, client-side deduplication can be vulnerable to security threats because file tag replaces the entire file. Recently, proof of ownership schemes have suggested to remedy the vulnerabilities of client-side deduplication. Nevertheless, client-side deduplication over encrypted data still causes problems in efficiency and security. In this paper, we propose a secure and practical client-side encrypted data deduplication scheme that has resilience to brute force attack and performs proof of ownership over encrypted data.

• The Journal of Engineering Geology
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• v.28 no.3
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• pp.431-441
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• 2018

To set up the future research and development direction for Auger bit, this study analyzed publicized patent trends of Deep Cement Mixing method (DCM) in Korea, USA, Japan, and Europe. DCM method was firstly classified into wing shapes and the number of rods according to the technical scope, and secondly, classified into 8 types according to type of screw and rotation axial. A total of 2,815 patents were searched and 448 validated patents were selected through de-duplication and filtering. As a result of the analysis of the portfolio through the number of patents and growth stages, it was selected as the core technology that auger is deemed to have high growth potential and if there is a patent similar to core technology through a patent barrier analysis, the basic data is suggested to develop the design around and differentiated technologies.