• Title/Summary/Keyword: data bases

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Fragment Combination From DNA Sequence Data Using Fuzzy Reasoning Method (퍼지 추론기법을 이용한 DNA 염기 서열의 단편결합)

  • Kim, Kwang-Baek;Park, Hyun-Jung
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.10 no.12
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    • pp.2329-2334
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    • 2006
  • In this paper, we proposed a method complementing failure of combining DNA fragments, defect of conventional contig assembly programs. In the proposed method, very long DNA sequence data are made into a prototype of fragment of about 700 bases that can be analyzed by automatic sequence analyzer at one time, and then matching ratio is calculated by comparing a standard prototype with 3 fragmented clones of about 700 bases generated by the PCR method. In this process, the time for calculation of matching ratio is reduced by Compute Agreement algorithm. Two candidates of combined fragments of every prototype are extracted by the degree of overlapping of calculated fragment pairs, and then degree of combination is decided using a fuzzy reasoning method that utilizes the matching ratios of each extracted fragment, and A, C, G, T membership degrees of each DNA sequence, and previous frequencies of each A, C, G, T. In this paper. DNA sequence combination is completed by the iteration of the process to combine decided optimal test fragments until no fragment remains. For the experiments, fragments or about 700 bases were generated from each sequence of 10,000 bases and 100,000 bases extracted from 'PCC6803', complete protein genome. From the experiments by applying random notations on these fragments, we could see that the proposed method was faster than FAP program, and combination failure, defect of conventional contig assembly programs, did not occur.

Design and Research for Intelligent Typhoon Evasion System for Ships

  • Wang, Jing-Quan;He, Yi;Shi, Ping-An;Peng, Xiao-Hong;Xu, Zu-Yuan;Qin, Shan-Ci;Li, Qing-Lie;Ding, Bing-Lin
    • Proceedings of the Korean Institute of Navigation and Port Research Conference
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    • 2001.10a
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    • pp.177-186
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    • 2001
  • Based upon the previous experiences and typical oases of typhoon evasion fur ships as well as tile achievement in scientific research in this detrain, we developed the Intelligent Typhoon Evasion System for Ships. It consists of five subsystems, including electronic charts, ship movement management, typhoon information query and automatic plotting, real-time calculation of ship-typhoon situation, intelligent typhoon evasion decision making. With the synthetical application of analogy theory, synoptic chart, satellite cloud picture analysis, typhoon digital forecast and other relevant technologies, we leave established the typhoon evasion data bases. model bases and knowledge bases, which make it possible to automatically track the ships and typhoon paths. The system can realize ship-typhoon situation analysis, risk levee assessment, typhoon paths correction and course synoptic forecast, and intelligent typhoon evasion decision making.

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PROPER ORTHOGONAL DECOMPOSITION OF DISCONTINUOUS SOLUTIONS WITH THE GEGENBAUER POST-PROCESSING

  • SHIN, BYEONG-CHUN;JUNG, JAE-HUN
    • Journal of the Korean Society for Industrial and Applied Mathematics
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    • v.23 no.4
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    • pp.301-327
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    • 2019
  • The proper orthogonal decomposition (POD) method for time-dependent problems significantly reduces the computational time as it reduces the original problem to the lower dimensional space. Even a higher degree of reduction can be reached if the solution is smooth in space and time. However, if the solution is discontinuous and the discontinuity is parameterized e.g. with time, the POD approximations are not accurate in the reduced space due to the lack of ability to represent the discontinuous solution as a finite linear combination of smooth bases. In this paper, we propose to post-process the sample solutions and re-initialize the POD approximations to deal with discontinuous solutions and provide accurate approximations while the computational time is reduced. For the post-processing, we use the Gegenbauer reconstruction method. Then we regularize the Gegenbauer reconstruction for the construction of POD bases. With the constructed POD bases, we solve the given PDE in the reduced space. For the POD approximation, we re-initialize the POD solution so that the post-processed sample solution is used as the initial condition at each sampling time. As a proof-of-concept, we solve both one-dimensional linear and nonlinear hyperbolic problems. The numerical results show that the proposed method is efficient and accurate.

Factors Determining Brand Equity for Retail Stores: A Market Segmentation Approach

  • PHAM, Hung Cuong
    • The Journal of Asian Finance, Economics and Business
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    • v.7 no.10
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    • pp.843-854
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    • 2020
  • The present study aims to analyze factors of brand equity in the retail stores in Vietnam; to recognize sub-dimensions connected with the forms of brand equity and thereby study the extent of the relationship among bases of market segmentation and brand equity. The present research made a collection of data by conducting a preliminary study. Responses were collected from the customers through a structured questionnaire to buy goods and services from the retail store in Vietnam. The sample size selected for the study was 196. The study applied various statistical tools, namely, Cronbach's Alpha for reliability checking, correlation and regression statistics with the support of SPSS Software. The brand association is treated as a vital determinant of brand equity that significantly influences the bases of market segmentation. Further, the study also recognized the fact that the majority of consumers who prefer to buy from retail stores are young and in the age-group of 18-24 years. The present study made an initial attempt to study the relationship among bases of market segmentation with the factors related to brand equity; thereby to offer a novel conceptual framework designed for retail stores in Vietnam for brand positioning.

A Study regarding IP Traceback designs and security audit data generation. (IP 역추적 설계 및 보안감사 자료생성에 관한 연구)

  • Lee, In-Hee;Park, Dea-Woo
    • KSCI Review
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    • v.15 no.1
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    • pp.53-64
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    • 2007
  • Avoid at damage systems in order to avoid own IP address exposure, and an invader does not attack directly a system in recent hacking accidents at these papers, and use Stepping stone and carry out a roundabout attack. Use network audit Policy and use a CIS, AIAA technique and algorithm, the Sleep Watermark Tracking technique that used Thumbprints Algorithm, Timing based Algorithm, TCP Sequence number at network bases, and Presented a traceback system at TCP bases at log bases, and be at these papers Use the existing algorithm that is not one module in a system one harm for responding to invasion technology develop day by day in order to supplement the disadvantage where is physical logical complexity of configuration of present Internet network is large, and to have a fast technology development speed, and presentation will do an effective traceback system.

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Development of Standardized Korean Plant Ontology for International Harmonization of Environmental and Ecological Knowledge Bases (환경·생태 지식베이스의 국제적 조화를 위한 한국형 표준 식물 온톨로지 개발)

  • Eunjeong Ju;Hunjoo Lee
    • Journal of Environmental Health Sciences
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    • v.49 no.4
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    • pp.201-209
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    • 2023
  • Background: To describe domain knowledge consistently and precisely, the establishment of a controlled vocabulary, a so-called ontology, is essential. Internationally, the plant ontology (PO) in the ecology field has been developed for the anatomy and developmental stages of plants in English, Spanish, and Japanese, but there is no Korean version of the PO due to a lack of knowledge on standardization for Korean plants. Objectives: We aimed to establish a Korean plant ontology with core PO architectures. Methods: The latest ontology web language (OWL)-formatted raw version of the PO was collected from the PO consortium site. A formal workflow process and OWL file-handing tools for efficient Korean content development were conducted and executed. Results: The macro- and micro-perspective frameworks of the PO were presented by analyzing the upper model and the internal OWL-leveled physical structure, respectively. We developed and validated Korean knowledge content for a total of 1,957 classes included in the PO and transplanted them into an ontology modeling system. Conclusions: A Korean plant ontology was established for international harmonization through improved compatibility and data exchangeability with multilingual environmental and ecological knowledge bases.

Development of a Supporting System for Nutrient Solution Management in Hydroponics I. Fertilizer Combination and Electrical Conductivity(EC) Prediction (양액재배를 위한 배양액관리 지원시스템의 개발 I. 배양액의 배합 및 전기전도도(EC)의 예측)

  • 손정익;김문기
    • Journal of Bio-Environment Control
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    • v.1 no.1
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    • pp.52-60
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    • 1992
  • The optimum management of nutrient solution needs the effective combination of fertilizers as well as the accurate control of nutrient solution. This study was attempt to make a supporting system for effective fertilizer combination by using computer and also to develop a EC predicting equation for keeping the EC of solution within the allowable range after application of combined fertilizers. The supporting system consists of three parts : (1) data bases, (2) rules for deciding the kinds and amounts of fertilizers and (3) main control. With input data, the main control automatically constructs the network connecting the related data bases and subsequently executes the operation of searching proper fertilizers through it. For more effective searching, fertilizers are classified into two levels(level 1 and level 2) in consideration of solubility, price, and frequency in use, and searched in that order. The EC prediction equation, a extended form of the Robinson and Stroke's theoretical equation only available for a binary electrolyte, is suggested for predicting the EC of the nutrient solution containing many kinds of inorganic compounds. The comparison of predicted and measured ECs showed good agreements with the high correlation between the predicted EC decrement by ion interaction and the actual one(limiting EC minus measured EC).

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Development of Expert System for Burr Formation in Face Milling (밀링가공시 버형성 예측을 위한 전문가 시스템 개발)

  • Ko, Sung-Lim;Kim, Young-Jin;Ko, Dae-Cheol;Han, Sang-U;Lee, Je-Yeol;Ahn, Yong-Jin
    • Journal of the Korean Society for Precision Engineering
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    • v.18 no.2
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    • pp.199-205
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    • 2001
  • Burr makes troubles on manufacturing process due to deburring cost, quality of products and productivity. This paper described the results of experimental study on the influence of the cutting parameters on the formation of exit burrs in face milling. Using the results of experimental study, burr types are classified and data bases are developed to predict burr formation result. From the CAD file for work geometry and the NC data for tool path, the exit angles are calculated at every edges. This program predicts the burr geometry at exit edges using the prediction algorithm and data bases which are developed experimentally. Simulation results on deformation strain and temperature are also available in specific 2-dimensional cutting conditions. Also algorithm which can determine the exit angle is proposed.

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Centroidal Voronoi Tessellation-Based Reduced-Order Modeling of Navier-Stokes Equations

  • 이형천
    • Proceedings of the Korean Society of Computational and Applied Mathematics Conference
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    • 2003.09a
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    • pp.1-1
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    • 2003
  • In this talk, a reduced-order modeling methodology based on centroidal Voronoi tessellations (CVT's)is introduced. CVT's are special Voronoi tessellations for which the generators of the Voronoi diagram are also the centers of mass (means) of the corresponding Voronoi cells. The discrete data sets, CVT's are closely related to the h-means clustering techniques. Even with the use of good mesh generators, discretization schemes, and solution algorithms, the computational simulation of complex, turbulent, or chaotic systems still remains a formidable endeavor. For example, typical finite element codes may require many thousands of degrees of freedom for the accurate simulation of fluid flows. The situation is even worse for optimization problems for which multiple solutions of the complex state system are usually required or in feedback control problems for which real-time solutions of the complex state system are needed. There hava been many studies devoted to the development, testing, and use of reduced-order models for complex systems such as unsteady fluid flows. The types of reduced-ordered models that we study are those attempt to determine accurate approximate solutions of a complex system using very few degrees of freedom. To do so, such models have to use basis functions that are in some way intimately connected to the problem being approximated. Once a very low-dimensional reduced basis has been determined, one can employ it to solve the complex system by applying, e.g., a Galerkin method. In general, reduced bases are globally supported so that the discrete systems are dense; however, if the reduced basis is of very low dimension, one does not care about the lack of sparsity in the discrete system. A discussion of reduced-ordering modeling for complex systems such as fluid flows is given to provide a context for the application of reduced-order bases. Then, detailed descriptions of CVT-based reduced-order bases and how they can be constructed of complex systems are given. Subsequently, some concrete incompressible flow examples are used to illustrate the construction and use of CVT-based reduced-order bases. The CVT-based reduced-order modeling methodology is shown to be effective for these examples and is also shown to be inexpensive to apply compared to other reduced-order methods.

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EFFECTS OF THE DIFFERENT CERAMIC BRACKET BASES ON SHEAR BOND STRENGTH (도재브라켓 접착면의 처리방식이 전단결합강도에 미치는 영향)

  • Kim, Jin-Oh;Lee, Ki-Soo
    • The korean journal of orthodontics
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    • v.24 no.4 s.47
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    • pp.957-967
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    • 1994
  • The purpose of this study was to evaluate the effects of different bases of ceramic brackets on shear bond strength and to observe failure patterns of bracket bondings. Lower bicuspid brackets whose bases designed for the macromechanical and silane treated chemical bonding those for silane treated chemical bonding, those for micromechanical bonding, and those for macromechanical bonding were tested as experimental groups, and foil mesh-backed metal brackets as a control group. All the brackets were bonded with $Mono-Lok\;2^{(TM)}$ on the labial surface of extracted human lower bicuspids after etching the enamel with $38\%$ phosphoric acid solution for 60 seconds. The shear bond strengths were measured on the universal test machine after 24 hours passed in the $37^{\circ}C$ water bath. The gathered data were evaluated and tested by ANOVA and Duncan's multiple range test, and those results were as follows. The shear bond strengths of brackets for macromechanical and chemical bonding, those for chemical bonding, and those for micromechanical bonding were not different (p>0.05), but showed statistically higher than those of metal bracket and those of ceramic bracket for micromechanical bonding(p<0.05). The shear bond strengths of ceramic bracket for micromechanical bonding showed statistically lower than those of metal bracket(p<0.05). The enamel fractures and/or ceramic bracket fractures were observed in the cases of higher bond strength than that of metal bracket. These results supported that silane treated base of ceramic bracket show higher shear bond strength than that of metal bracket, and suggested that micromechanical form of ceramic bracket bases show higher shear bond strength than that of macromechanical form.

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