• 제목/요약/키워드: chromosome 1

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한국산 청개구리 두 종(Hyla japonica와 H.suweonensis)의 핵형 비교분석 (Comparative Karyological Analysis of the Korean Treefrogs, Hyla japonica and Hyla suweonensis (Anura, Hylidae))

  • 이혜영;유성림
    • 한국동물학회지
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    • 제31권2호
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    • pp.104-110
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    • 1988
  • 한국산 청개구리 두 종(Hyla japonica와 Hyla suweonensis)의 핵형을 비교 분석한 결과 두 종의 핵형은 2n=24로 동일하였으나 두 종의 6번 염색체는 동일한 % length를 보이나 Hyla japonica의 6번염색체는 subtelocentric chromosome인 반면에 Hyla suweonensis의 6번염색체는subtelocentric chromosome이었다. 6번염색체의 이러한 형태적 차이는 pericentric inversion에 의한 것으로 설명할 수 있다. 또한 두 종은 모두 6번 염색체의 1쌍의 NOR을 가지고 있다.

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A Pilot Genome-wide Association Study of Breast Cancer Susceptibility Loci in Indonesia

  • Haryono, Samuel J;Datasena, I Gusti Bagus;Santosa, Wahyu Budi;Mulyarahardja, Raymond;Sari, Kartika
    • Asian Pacific Journal of Cancer Prevention
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    • 제16권6호
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    • pp.2231-2235
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    • 2015
  • Genome-wide association studies (GWASs) of the entire genome provide a systematic approach for revealing novel genetic susceptibility loci for breast cancer. However, genetic association studies have hitherto been primarily conducted in women of European ancestry. Therefofre we here performed a pilot GWAS with a single nucleotide polymorphism (SNP) array 5.0 platform from $Affymetrix^{(R)}$ that contains 443,813 SNPs to search for new genetic risk factors in 89 breast cancer cases and 46 healthy women of Indonesian ancestry. The case-control association of the GWAS finding set was evaluated using PLINK. The strengths of allelic and genotypic associations were assessed using logistic regression analysis and reported as odds ratios (ORs) and P values; P values less than $1.00{\times}10^{-8}$ and $5.00{\times}10^{-5}$ were required for significant association and suggestive association, respectively. After analyzing 292,887 SNPs, we recognized 11 chromosome loci that possessed suggestive associations with breast cancer risk. Of these, however, there were only four chromosome loci with identified genes: chromosome 2p.12 with the CTNNA2 gene [Odds ratio (OR)=1.20, 95% confidence interval (CI)=1.13-1.33, $P=1.08{\times}10^{-7}$]; chromosome 18p11.2 with the SOGA2 gene (OR=1.32, 95%CI=1.17-1.44, $P=6.88{\times}10^{-6}$); chromosome 5q14.1 with the SSBP2 gene (OR=1.22, 95%CI=1.11-1.34, $P=4.00{\times}10^{-5}$); and chromosome 9q31.1 with the TEX10 gene (OR=1.24, 95%CI=1.12-1.35, $P=4.68{\times}10^{-5}$). This study identified 11 chromosome loci which exhibited suggestive associations with the risk of breast cancer among Indonesian women.

지모의 핵형 분석 (Karyotype Analysis of Anemarrhena asphodeloides Bunge)

  • 김수영;구달회;방재욱
    • 한국약용작물학회지
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    • 제10권2호
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    • pp.144-146
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    • 2002
  • 약용으로 재배되고 있는 지모의 세포유전학적인 연구인 핵형 분석 결과는 다음과 같다. 지모의 체세포 염색체 수는 2n=22였으며. 외형으로 비교해 보았을 때, 3쌍의 상대적으로 길이가 긴 염색체와 길이가 짧은 8쌍의 염색체로 구별이 되었다. 염색체의 평균 길이는 염색체의 길이는 $1.27-3.80\;{\mu}m$로 관찰되었다. Armatio 비교를 통한 핵형 분석에서는 8쌍의 중부 염색체 (염색체 2, 3, 6, 7, 8, 9, 10 및 11), 2쌍의 차중부 염색체 (염색체 4와 5) 그리고 1쌍의 차단부 염색체 (염색체 1)로 구분되었다.

사람 Y 염색체 특이 DNA Probe의 개발과 이를 이용한 FISH 기술의 임상적 적용 (Identification of a Human Y Chromosome Specific DNA Probe and Their Clinical Application by Fluorescence in situ Hybridization Techniques)

  • 류란숙;이상찬;이채식;김종흥;류은경;손시환
    • Clinical and Experimental Reproductive Medicine
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    • 제27권4호
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    • pp.405-415
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    • 2000
  • Objective: The present study was undertaken to synthesize a human Y chromosome specific probe and to confirm the usefulness of the probe for fluorescence in situ hybridization (FISH) in various types of human cells. Methods: An approximately 400 bp DNA fragment of the DYZ1 sequences was synthesized by PCR using digoxigenin labeled dUTP (dig-PCR). The fidelity of probe was tested by FISH for cultured and uncultured human lymphocytes, amniocytes, chorionic villus cells, embryos, sperms, and germ cells of seminiferous tubule. Results: The human Y chromosome specific probe hybridized specifically to Y chromosome of the cells that had been tested. This probe assigned to the Yq12 region where the DYZ1 repetitive sequence is concentrated. Conclusion: We have identified a human Y chromosome specific probe that hybridized specifically to the Y chromosome by FISH for various types of uncultured as well as cultured cells. Therefore FISH technique using human Y chromosome specific probe should be useful for clinical application as a diagnostic tool for the detection of human Y chromosome.

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Fusarium 속 균종들의 염색체수 (Chromosome Number in Several Species of the Genus Fusarium)

  • 민병례
    • 미생물학회지
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    • 제29권1호
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    • pp.69-73
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    • 1991
  • The chromosome of Fusarium species during the vegetatve nuclear divisions in hyphae were observed by use of HCl-Giemsa technique on light microscope. The haploid chromosome number of Fusarium anthophilum 7472 was n=7, n=6 in F. anthophilum 7481 and n=6 in F. oxysporum 7500. The haploid chromosome number was 7 in F. napiforme 6129 and F. napiforme 6144. Those of F. caucasicum F. caucasicum ATCC 18791 and F. aquaeductuum ATCC 15612 were n=5. F. coeruleum ATCC 20088 was n=6, n=8 in F. camptoceras ATCC 16065 and n=7 in F. sambucinum NRRL 13451. From these results and previous papers, it may be concluded that the basic haploid chromosome number of the genus Fusarium is n=4.

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염색체 이상 환자의 세포 유전학적 연구 (A Cytogenetic Study in Patients Referred for Suspected Chromosomal Abnormalities)

  • 오선경;이형환;문신용;장윤석
    • Clinical and Experimental Reproductive Medicine
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    • 제12권2호
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    • pp.39-57
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    • 1985
  • Presented in this paper the data from a chromosome study of 397 patients referred for suspected chromosmal abnormalities. Karyotypes were obtained using short-term blood culture and direct method. Of these 238 patients had normal chromosome complements; 159 (40.1%) patients had chromosome abnormality. Among all patients with chromosome abnormalities, 82.4% (131/159) had aberrations of chromosome number, the others 17.60/0 (28/159\ had aberrations of chromosome structure. Ten had a chromosome rearrangement; Five of them were reciprocal and five Robertsonian translocations. Four patients with pericentric inversions and one with paracentric inversions and four with isochromosomes were observed. There were four patients with marker chromosome, two patients had a chromosome insertion; and three others. (additional abnormal chromosomes.) Thus the results of the present study indicate the importance of cytogenetic evaluation in clinically abnormal patients.

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한우의 염색체 이상에 관한 연구 I. 한우와 교잡종 수소에서의 1/29 Robertson형 전좌 (Studies on Chromosomal Aberration in Korean Native Cattle I. 1/29 Robertsonian Translocation of Korean Native and Crossbred Bulls)

  • 김창근;정영채;이근상;김흥률;이장희;정진태
    • 한국가축번식학회지
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    • 제15권2호
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    • pp.87-95
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    • 1991
  • The chromosome analyses of blood culture were made of 11 Korean native and 53 crossbred males between the Korean native cattles(K) and Charolais(C), which consisted of $K\times$K, $C\times$K, $C\times$CK, CK$\times$CCK and Charolais synthetic males(CK$\times$CCK or CCK$\times$CK). 1. The diploid(2n=60, XY) Charolais synthetic male has the 29 pairs of acrocentric autosomes, a single large submetacentric X and a small metacentric Y chromosome. 2. The numbers of G-band of karyotype in these males were a few differences in the 8 pairs of autosomes(chromosome 2, 4, 5, 6, 9, 11, 19 and 26) compared to those of purebred Korean native ones. G-banding qualities were not matched in chromosome 16, 19 and 29 with the Korean native males and also in chromosome 14, 20 and 22 with other domestic cattles. 3. The G-banding pattern between chromosome 4-6-7 and 24-25-27 was alomost similar together and the possibilityof misidentification was greater in the G-banded preparations. 4. 1/29 Robertsonian translocation and other abnormalities were not observed among 11 Korean native and 53 crossbred males. This result is considered in relation to limited data and further investigation based on larger samples may be necessary for definite conclusion.

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3중 DNA probe를 이용한 FISH(fluorescence in situ hybridization) 기법으로 방사선에 의한 염색체 이상 분석 (Analysis of Chromosome aberrations by fluorescence in situ hybridization using triple chromosome-specific probes in human lymphocyte exposed to radiation)

  • 정해원;김수영;하성환
    • Journal of Radiation Protection and Research
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    • 제24권1호
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    • pp.45-53
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    • 1999
  • 각 염색체에 특이한 DNA probe를 이용하는 FISH기법은 방사선에 의해 유발된 상호전좌 및 삽입 등의 염색체의 구조적 변화를 측정하는 매우 효과적인 방법으로서 그 활용성이 증가되고 있다. 본연구는 방사선 피폭시 생물학적 선량측정법으로서 FISH기법을 활용하기 위하여 사람의 1, 2, 4번 염색체에 특이한 probe를 이용하여 고선량 단일 피폭시 유발된 각종 염색체 이상빈도를 관찰하고 이를 PAINT분류체계에 의해 분석하였다. 방사선 조사에 의한 염색체 이상빈도는 상호전좌(t)와 이동원염색체(dic)의 수가 선량 증가에 따라 같이 증가하는 것을 알 수 있으며 color junction의 수도 선량에 따라 증가하는 것을 알 수 있었다. 상호전좌의 빈도는 이동원 염색체의 빈도보다 상대적으로 높게 나타났다. 삽입(ins), 무동원염색체(ace), 및 환상염색체(r)의 수도 선량 증가에 따라 같이 증가하는 것을 알 수 있었다. 기존의 염색체재배열 분석방법과 비교해 볼 때 FISH기법은 다양한 형태의 염색체재해열을 보다 쉽게 관찰할 수 있게 하며 생물학적 선량제로서 중요한 역할을 할 것이라 기대된다.

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Sex Linked Developmental Rate Differences in Murrah Buffalo (Bubalus bubalis) Embryos Fertilized and Cultured In Vitro

  • Sood, S.K.;Chauhan, M.S.;Tomer, O.S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제12권1호
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    • pp.15-21
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    • 1999
  • The aim of the present study was to determine the effect of paternal sex chromosome on early development of buffalo embryos fertilized and cultured in vitro. Embryos were produced in vitro from abattoir derived buffalo oocytes. The cleaved embryos were cocultured with buffalo oviductal epithelial cells and evaluated on day 7 under the phase contrast microscope to classify development. The embryos which reached the morula/blastocyst stage were fast developing, the embryos which were at 16-32 cell stage were medium developing and the embryos below 16 cell stage were slow developing. The embryos which showed some fragmentation in the blastomeres or degenerated blastomeres, were degenerating. Sex of emberyos (n=159) was determined using PCR for amplification of a male specific BRY. 1 (301 bp) and a buffalo specific satellite DNA (216 bp) fragments. The results thus obtained show that 1) X and Y chromosome bearing sperms fertilize oocytes to give almost equal numbers of cleaved XX and XY embryos, 2) male embryos develop faster than female embryos to reach advanced stage and 3) degeneration of buffalo embryos is not linked with the paternal sex chromosome. We suggest that faster development of males is due to differential processing of X and Y chromosome within the zygote for its activation and / or differential expression of genes on paternal sex chromosome sex chromosome during development of buffalo embryos fertilized and cultured in vitro which may be attributed to a combination of genetic and environmental factors.

가족성 근위축성측삭경화증을 유발시키는 두 번째 유전자 위치 (Second locus for late-onset familial Amyotrophic Lateral Sclerosis)

  • 홍성출
    • 생명과학회지
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    • 제11권3호
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    • pp.279-283
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    • 2001
  • Amyotrophic lateral sclerosis(ALS) is a progressive neurologic disorder resulting from the degeneration of upper and lower motor neurons, and is inherited in 10% of cases. About 20% of familial ALS, clinically indistinguishable from sporadic ALS, is caused by mutations of Cu/Zn superoxide dismutase on chromosome 21q22.21 inherited as an autosomal dominant trait. We now report a new locus in the non-SOD1 dominantly inherited ALS. We screened a large ALS family with 11 affected individuals and one obligate gene carrier with genome-wide ABI polymorphic markers using the ABI 377 automated system. No evidence of linkage was obtained with the autosomal markers. We next screened this family with X chromosome markers as there was no evidence of male-to-male tran-smission of the disease. Linkage was established with several X chromosome markers with a lod score up to 3.8; almost the maximum possible score in this family. Our finding imply that a gene for the dominant expression of a neuronal degeneration is coded on X chromosome and raise the question of the role of X-linked genes that escape inactivation in this pathogenesis. More importantly, our finding that a gene causing ALS is localized on X-chromosome has direct investigational relevance to sporadic ALS, where epidemiological studies show male gender predominance(1.3:1) and earlier onset in men by 5-10 years.

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