• Title/Summary/Keyword: changes of soil microorganisms

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Evaluation of the performance of encapsulated lifting system composting technology with a GORE(R) cover membrane: Physico-chemical properties and spectroscopic analysis

  • Al-Alawi, Mutaz;El Fels, Loubna;Benjreid, Ramadan;Szegi, Tamas;Hafidi, Mohamed;Simon, Barbara;Gulyas, Miklos
    • Environmental Engineering Research
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    • v.25 no.3
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    • pp.299-308
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    • 2020
  • Composting is among the most effective integrated waste management strategies used to recycle sewage sludge (SS) waste and generate a useful product. An encapsulated lifting system is a relatively new industrial-scale composting technology. The objective of this study was to evaluate the effectiveness of composting dewatered stabilized SS mixed with green waste using this new technology. The composting process was monitored by changes in the physico-chemical properties, UV-visible spectra, and fourier transform infrared (FTIR) spectra. The composting temperature was steady in the thermophilic range for 24 and 12 d in the intensive and maturation phases, respectively, which fulfilled the disinfection requirement. Moreover, the temperature increased rapidly to 76.8℃ within three days, and the thermophilic temperatures peaked twice and lasted longer than in traditional composting, which accelerated SS degradation and decreased the composting period necessary to obtain mature compost. FTIR spectroscopic analysis showed a diminished in methyl group derived from methylene C-H aliphatic groups because of organic matter degradation by microorganisms and an increased number of aromatic chains. The new technology may be a viable and sustainable alternative for SS management that converts waste into compost that is useful as a soil amendment.

PCR-DGGE Analysis of the Fungal Community of Red-pepper Fields Utilizing Eco-friendly Farming Methods (PCR-DGGE를 이용한 친환경 농법 적용 고추경작지 내 진균의 군집 다양성 분석)

  • Jung, Byung-Kwon;Kim, Gwang-Seop;Song, Jin-Ha;Kim, Sang-Dal
    • Microbiology and Biotechnology Letters
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    • v.41 no.3
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    • pp.292-299
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    • 2013
  • In this study, we analyzed the changes in fungal populations of red-pepper fields employing eco-friendly farming methods, such as microbial agents and crop rotation, by using polymerase chain reactions coupled with denaturing gradient gel electrophoresis (PCR-DGGE). Primer specific for fungi were used to determine the contribution of domains to the microbial community. Analysis of planted and non-planted soil samples applying PCR-DGGE technology offered evaluation of long-term patterns in fungal species richness. To evaluate the stability of DGGE patterns from different soils, comparison of planted and non-planted soil samples were compared using PCR-DGGE. The number of DNA fragments obtained from all planted soil samples by DGGE separation was far greater (14 to 15 bands) than that of the non-planted soil samples (3 to 4 bands). In addition, 14 bands were observed from crop continuation soil treated with agrochemicals and 18 bands from crop rotation soil treated with microbial agents. The PCR-DGGE analysis suggests that the use of crop rotation and microbial agents benefits the fungal community more than crop continuation using agrochemicals. These results indicate that crop rotation with microbial agents was better able to support beneficial organisms, enable more effective biological control and maintain a healthier balance of nutrients, organic matter and microorganisms.

Effects of Pesticides on Soil Microflora - Changes in Soil Microflora by Application of Organochlorine Pesticides - (농약(農藥)이 토양미생물상(土壤微生物相)에 미치는 영향(影響) -유기염소계(有機鹽素系) 살균제(殺菌劑) 및 살충제살포(殺蟲劑撒布)에 따른 전토양미생물상(田土壤微生物相)의 변동(變動)-)

  • Yang, Chang-Sool
    • Korean Journal of Soil Science and Fertilizer
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    • v.17 no.3
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    • pp.299-306
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    • 1984
  • The influences of applications of organochlorine insecticide (HCH: Hexachlorocyclohexane, 10 ppm), fungicide (TPN: Tetrachloroisophthalonitrile, 40 ppm) and manure ($3Kg/m^2$) each or together on changes in soil microflora for consecutive years were investigated in the experimental field plots. The insecticide had a little effect on soil microbial numbers. In particular, the number of total bacteria, Gram-negative bacteria and fungi were gradually increased at the latter stage of the consecutive application, but the number of sporeforming bacteria reduced. The fungicide reduced the counts of sporeforming bacteria, actinomycetes and fungi respectively, whereas increased prominently the counts of total bacteria and Gram-negative bacteria. TPN-resistant bacteria, particulary TPN-resistant Gram-negative bacteria were gradually accumulated by the long-term application of TPN, and further the number of TPN-resistant total bacteria and the of TPN-resistant Gram-negative bacteria correlated fairly well during all the period. The influences of combined applications of both HCH and TPN on the number of soil microorganisms were equal to the respective sums of the effects of single application of each pesticide. The combined application of manure and these pesticides elevated the increasing extents of microbial numbers, while weakened the detrimental efforts of these pesticides on microbial numbers. These data suggest that the long-term application of these materials have resulted in the remarkable changes of composition of soil microflora.

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Role of Crops and Residues, and Fertilization to Changes of microbial Population, Soil chemical Properties and Plant Growth -I. Microbial Population in the Habitate (작물(作物)의 종류(種類)와 잔사(殘渣) 및 시비량(施肥量)이 토양미생물상(土壤微生物相), 이화학성(理化學性) 및 작물생육(作物生育)에 미치는 역할(役割) -I. 미생물상(微生物相) 변화(變化))

  • Kim, Seung-Hwan;Lee, Sang-Kyu
    • Korean Journal of Soil Science and Fertilizer
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    • v.25 no.4
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    • pp.370-377
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    • 1992
  • A series of field and laboratory experimentes were conducted to find out the effects of kinds of crops residues and the different amount of fertilizer to the microbial interaction, chemical properties, plant growth and their interaction under continous cultivation of hot pepper, soybean, sesame and upland rice. The results obtained were summerized follows : 1. Total number of bacteria and actinomycetes were enhanced by cultivation of upland rice and soybean while no appreciable effects were obtained by the cultivation of hot pepper and sesame. 2. The number of bacteria, actinomycetes and fungi were increased by return of crop residues when the cultivation of hot pepper, soybean, sesame and upland rice. Specially, actinomycetes was remarkably increased by upland rice cultivation. 3. Increased amount of fertilizer were remarkably affected to decrease of number of soil microorganisms. Specially, actinomycetes succession was appearently affects while plant growing time. 4. The number of identified soil bacterial species were obtained high in order of Bacillus sp.>Rhizobium sp.>Agrobacterium sp.>Pseudomonas sp. The number of Gram positive bacteria were superior than that of Gram negative bateria. 5. Interaction between microbial succession and crops cultivation, the number of Bacillus sp. was increased in hot pepper, Rhizobium sp. was in soybean, and sesame, and Agrobacterium sp. were increased in soybean, respectively. 6. Survival and habitate of soil microorganisms were differ with kinds of crop, application of residue and fertilizers. Most high number of Bacillus sp. Rhizobium sp. and Pseudomonas sp. were obtained on the rhizoplane and rhizosphere while Agrobacterium sp. and Fusarium sp. were high in rhizosphere. 7. Factors in relation to change of soil microbial population was obtained high in order of climates>crops>organic>matter>fertilizer.

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Influence of Lime and Phosphate Application on Amide and Ureide Nitrogen of Soybean Plants and Soil Microorganisms (석회(石灰)와 인산시용(燐酸施用)이 대두식물체중(大豆植物體中) Amide태(態) 및 Ureide태(態) 질소(窒素)와 토양미생물상(土壤微生物相)의 변화(變化)에 미치는 영향(影響))

  • Ko, Jae-Young;Ryu, In-Soo;Lee, Sang-Kyu;Suh, Jang-Sun
    • Korean Journal of Soil Science and Fertilizer
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    • v.24 no.1
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    • pp.69-76
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    • 1991
  • A pot experiment was conducted to find out the effects of lime and phosphate application on the changes of number of soil microorganisms, indigenous Rhizobium japonicum, nodule formation, and ureide-and amide-N in leaf and stem exudate of soybean plant under uncultivated hillside red earth in very low pH value, organic matter, available phosphate, and cation exchange capacity. The results obtained were summarized as follows : 1. The plant height, stem length, root dry weight and nodule weight were significantly increased with the application of lime and phosphate application than that of control plot. 2. The concentration of amide-N in soybean plant at the 45 days after sowing was obtained as high in order of control>lime> lime+phosphate while the concentration was obtained in order of Iime+phosphate>lime> control at flowering stage 3. However, concentration of ureide-N in the soybean leaf at the 45 days after sowing was obtained as high in order of control>lime>lime+hosphate while reversed concentration was obtained in stem. 4. The number of soil microorgan isms were increased with increase of pH value, available phosphate and soil exchangeable cation. 5. Significantly negative high correlation were obtained with the concentration of Al, Fe in soil and the concentration of amide-and ureide-N in soybean plant at flowering stage while positive correlation was obtained with plant growth and the concentration of ureide-N.

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Temporal Change in Vertical Distribution of Woody Vegetation on the Flank of Sakurajima Volcano, Southern Kyushu, Japan

  • Teramoto, Yukiyoshi;Shimokawa, Etsuro;Ezaki, Tsugio;Lim, Young-Hyup;Kim, Suk-Woo;Chun, Kun-Woo
    • Journal of Forest and Environmental Science
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    • v.32 no.3
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    • pp.270-279
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    • 2016
  • This study explained vertical distributions and growth environments for woody vegetation. It had been degenerated by long-term volcanic activity of Sakurajima; vegetation and thicknesses of tephra layers and forest soils were investigated at 5 sites (250-700 m in altitude) with different altitudes localized at the northwestern-northern flanks of Sakurajima in Kagoshima Prefecture. The results in 2015 were compared with the vertical distribution of woody vegetation in 1963, when the volcanic activity of Sakurajima was relatively moderate. Thus, we investigated temporal changes in the vertical distribution of woody vegetation owing to volcanic activity over about 50 years (1963-2015). We indicated altitude decreased, the number of woody vegetation, number of species, sum of cross-sectional area of tree diameter at breast height, Fisher-Williams's diversity index ${\alpha}$, and forest soil thickness increased. However, these values were found to be degenerated when compared to climax forest values, and succession was incomplete. It seems that because the woody vegetation of the flank was affected by volcanic activity for a long time, exposing them to severe growth environments, areas with lower altitudes became distant from the craters of Sakurajima, thereby weakening the effect of volcanic activity in these areas at lower altitudes. a at the same altitudes over about 50 years (1963-2015) decreased by about 31-72%, and the sum of the cross-sectional area in tree diameter at breast heights decreased by about 14-62%. Thus, comparative growth environments for woody vegetation in 2015 were more severe than that of 1963, with respect to tephra layer thickness. In addition, for vegetation succession in the flank of Sakurajima, vegetation restoration should be promoted through the introduction of artificial woody plants covered by symbiotic microorganisms or organic materials.

Metagenomic Analysis of Fungal Communities Inhabiting the Fairy Ring Zone of Tricholoma matsutake

  • Kim, Miae;Yoon, Hyeokjun;You, Young-Hyun;Kim, Ye-Eun;Woo, Ju-Ri;Seo, Yeonggyo;Lee, Gyeong-Min;Kim, Young Ja;Kong, Won-Sik;Kim, Jong-Guk
    • Journal of Microbiology and Biotechnology
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    • v.23 no.10
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    • pp.1347-1356
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    • 2013
  • Tricholoma matsutake, an ectomycorrhiza that has mutual relationships with the rootlet of Pinus denisflora, forms a fruiting body that serves as a valuable food in Asia. However, the artificial culture of this fungus has not been successful. Soil fungi, including T. matsutake, coexist with many other microorganisms and plants; therefore, complex microbial communities have an influence on the fruiting body formation of T. matsutake. Here, we report on the structures of fungal communities associated with the fairy ring of T. matsutake through the pyrosequencing method. Soil samples were collected inside the fairy ring zone, in the fairy ring zone, and outside the fairy ring zone. A total of 37,125 sequencing reads were obtained and 728 to 1,962 operational taxonomic units (OTUs) were observed in the sampling zones. The fairy ring zone had the lowest OTUs and the lowest fungal diversity of all sampling zones. The number of OTUs and fungal taxa inside and outside the fairy ring zone was, respectively, about 2 times and 1.5 times higher than the fairy ring. Taxonomic analysis showed that each sampling zone has different fungal communities. In particular, out of 209 genera total, 6 genera in the fairy ring zone, such as Hemimycena, were uniquely present and 31 genera, such as Mycena, Boletopsis, and Repetophragma, were specifically absent. The results of metagenomic analysis based on the pyrosequencing indicate a decrease of fungal communities in the fairy ring zone and changes of fungal communities depending on the fairy ring growth of T. matsutake.

Analysis of a Microbial Community Denitrying Nitrate to Nitrogen Gas in a Nitrate-Contaminated Aquifer

  • Jin-Hun, Kim;Bong-Ho, Son;Su-Yeol, Gwon;Seong-Uk, Eo;Yeong, Kim
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2004.09a
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    • pp.175-178
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    • 2004
  • Little study has been published specifically addressing the dynamics of nitrate reducing bacteria (NBR) during the bioremediation of nitrate-contaminated aquifer. In our previous study we successfully quantified fumarate-enhanced microbial nitrate reduction rate in a nitrate-contaminated aquifer by using a series of single-well push-pull tests (PPTs). In this study we analyzed the suspended population during PPTs. To monitor changes in the microbial community, PCR amplification of 16S rDNA genes and denaturing gradient gel electrophoresis (DGGE) were used to study the dynamics of the bacterial community in detail. Before the stimulation of NBR, the dominant DGGE bands obtained by PCR were affiliated with V-Proteobacteria consisting of Acinetobacter spp. and Pseudomonas fluorescens. However, as NBR biostimulation proceeded, the dominant patterns of DGGE bands changed, and they were affiliated with Azoarcus denitrificans Td-3 and Flavobacterium xanthum. Azoarcus denitrificans Td-3 is known to completely reduce nitrate to nitrogen gas. The series of single-well push-pull tests in this study should prove useful for conducting rapid, low-cost feasibility assessments for in situ denitrification and provide important information about which microorganisms play a key role in bioremediation of a nitrate contaminated aquifer.

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Seasonal Changes of Microflora in Paddy Soil with Long-term Application of Organic Matter (유기물(有機物) 연용답토양(連用畓土壤)에 있어서 미생물상(微生物相)의 계절적(季節的) 변화(變化))

  • Lee, Sang-Bok;Choi, Yoon-Hee;Lee, Kyung-Bo;Yoo, Chul-Hyun;Rhee, Gyeong-Soo
    • Korean Journal of Soil Science and Fertilizer
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    • v.28 no.4
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    • pp.356-362
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    • 1995
  • This experiment was carried out to investigate the effects on the seasonal population change of microflora of long-term application of organic matters in Fluvio-Alluvial plain of Jeonbug series. As organic matters, rice straw and compost of 5 and 10ton/ha, which were applied with the different nitrogen fertilizer level of 0, 150kg/ha into the soil 15cm deep, respectively. A number of total aerobic bacteria were gradually increased from just after water-logging before rice transplanting to pancle formations stage, afterthat decreased at harvest. The other side, a number of actinomycetes, fungi and cellulose-decomposers were slightly fluctuated until panicle formation stage and increased at havesting stage. In general, microorganism numbers were higher in organic matter with long-term nitrogen fertilizer applied plot, while cellulose-decomposers were higher in only organic matter applied plot. The microorganisms of ammonia-oxidizing, nitrate-reducing and nitrite-oxidizing, and denitrifying bacteria showed the maximum number at harvest stage, at panicle formation stage and at early tillering stage, respectively, while that of ammonifying bacteria were variable if nitrogen fertilizer applied or not at the respective periods in nitrogen cycle under water-logging. These bacteria were numerous in the organic matter plots combined with nitrogen fertilizer, especially, denitrifying bacteria in rice straw, others no difference.

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Changes of Chemical and Microbial Properties of Soils after Forest Fires in Coniferous and Deciduous Forests (침엽수와 활엽수 산림에서 산불 후 토양화학적 및 토양미생물학적 특성 변화)

  • Kim, Jong-Gap;O, Gi-Cheol
    • The Korean Journal of Ecology
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    • v.24 no.1
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    • pp.1-7
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    • 2001
  • This study was carried out to examine the recovery of forest ecosystem by changes of soil chemical properties and soil microorganism at the burned areas of coniferous (Mt. Chocdae) and broad leaved forest (Samsinbong in Mt. Chiri). In the soil chemical properties of the burned area of Samsinbong, pH was 5.8, and contents of organic matter, total nitrogen, available P₂O/sub 5/, exchangeable K/sup +/, exchangeable Ca/sup ++/ and exchangeable Mg/sup ++/ were 7.42%, 0.73%, 28.5 ㎎/㎏, 1.3 me/100g, 13.3 me/100g and 2.2 me/100g, respectively. But they showed a tendency to decrease with time. In the soil chemical properties of the burned area of Mt. Chocdae, pH was 5.3, and contents of organic matter, total nitrogen, available P2O5, exchangeable K/sup +/, exchangeabe Ca/sup ++/ and Exchangeable Mg/sup ++/ were 6.42%, 0.25%, 24.4 ㎎/㎏, 0.7 me/100g, 3.7 me/100g and 2.1 me/100g, respectively, and they also showed a tendency to decrease with time. In contrast, they were not changed with time at the unburned areas. At the burned area of Samsinbong, soil microorganism showed to order of fungi (69×10⁴ CFU), actinomycetes (523×10⁴ CFU) and aerobic bacteria (291×10⁴ CFU), and at the unburned area, showed to order of actinomycetes (745×10⁴ CFU), fungi (594×10⁴ CFUU), and aerobic bacteria (160×10/sup 4/ CFU). At the burned area of Mt. Chocdae, soil microorganism showed to order of fungi (676×10⁴ CFU), actinomycetes (434×10⁴ CFU) and aerobic bacteria (350×10⁴ CFU), and at the unburned area, showed to order of fungi (461 ×10⁴ CFU), aerobic bacteria (328×10⁴ CFU) and actinomycetes (319×10⁴ CFU). Soil microorganisms of the aerobic bacteria, actinomycetes and fungi appeared at the burned areas were much more abundant than unburned areas. The aerobic bacteria appeared at the coniferous forest were also much more than the broad-leaved forest. The actinomycetes and fungi appeared at the broad-leaved forest were much more abundant than the coniferous forest.

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